RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 P3H3Q8IVL6 736 aa17.54■□□□□ 0.4
SMURF1-204ENST00000480055 ZMYM4Q5VZL5 1548 aa17.53■□□□□ 0.4
SMURF1-204ENST00000480055 ZBTB22O15209 634 aa17.52■□□□□ 0.4
SMURF1-204ENST00000480055 FER1L4A9Z1Z3 1794 aa17.52■□□□□ 0.4
SMURF1-204ENST00000480055 TTC37Q6PGP7 1564 aa17.51■□□□□ 0.39
SMURF1-204ENST00000480055 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
SMURF1-204ENST00000480055 DENND4BO75064 1496 aaPredicted RBP17.5■□□□□ 0.39
SMURF1-204ENST00000480055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMURF1-204ENST00000480055 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
SMURF1-204ENST00000480055 EFCAB5A4FU69 1503 aa17.48■□□□□ 0.39
SMURF1-204ENST00000480055 FANCAO15360 1455 aa17.48■□□□□ 0.39
SMURF1-204ENST00000480055 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
SMURF1-204ENST00000480055 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
SMURF1-204ENST00000480055 AKNAQ7Z591 1439 aa17.46■□□□□ 0.39
SMURF1-204ENST00000480055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
SMURF1-204ENST00000480055 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
SMURF1-204ENST00000480055 HECW1Q76N89 1606 aa17.43■□□□□ 0.38
SMURF1-204ENST00000480055 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
SMURF1-204ENST00000480055 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
SMURF1-204ENST00000480055 MAGI2Q86UL8 1455 aa17.42■□□□□ 0.38
SMURF1-204ENST00000480055 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
SMURF1-204ENST00000480055 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
SMURF1-204ENST00000480055 YEATS2Q9ULM3 1422 aa17.4■□□□□ 0.38
SMURF1-204ENST00000480055 EEA1Q15075 1411 aa17.38■□□□□ 0.37
SMURF1-204ENST00000480055 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
SMURF1-204ENST00000480055 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
SMURF1-204ENST00000480055 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
SMURF1-204ENST00000480055 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
SMURF1-204ENST00000480055 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
SMURF1-204ENST00000480055 ARHGEF12Q9NZN5 1544 aa17.36■□□□□ 0.37
SMURF1-204ENST00000480055 HSPA2P54652 639 aa17.35■□□□□ 0.37
SMURF1-204ENST00000480055 STRCQ7RTU9 1775 aa17.33■□□□□ 0.37
SMURF1-204ENST00000480055 PLCH2O75038 1416 aa17.31■□□□□ 0.36
SMURF1-204ENST00000480055 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
SMURF1-204ENST00000480055 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
SMURF1-204ENST00000480055 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
SMURF1-204ENST00000480055 KIF14Q15058 1648 aa17.29■□□□□ 0.36
SMURF1-204ENST00000480055 KDM5CP41229 1560 aa17.29■□□□□ 0.36
SMURF1-204ENST00000480055 LRRIQ1Q96JM4 1722 aa17.29■□□□□ 0.36
SMURF1-204ENST00000480055 ATP10AO60312 1499 aa17.29■□□□□ 0.36
SMURF1-204ENST00000480055 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
SMURF1-204ENST00000480055 CDC42BPBQ9Y5S2 1711 aa17.25■□□□□ 0.35
SMURF1-204ENST00000480055 REREQ9P2R6 1566 aa17.25■□□□□ 0.35
SMURF1-204ENST00000480055 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
SMURF1-204ENST00000480055 C3P01024 1663 aa17.25■□□□□ 0.35
SMURF1-204ENST00000480055 ZNF518AQ6AHZ1 1483 aa17.24■□□□□ 0.35
SMURF1-204ENST00000480055 MLECQ14165 292 aa17.24■□□□□ 0.35
SMURF1-204ENST00000480055 ABCA6Q8N139 1617 aa17.23■□□□□ 0.35
SMURF1-204ENST00000480055 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
SMURF1-204ENST00000480055 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.34
SMURF1-204ENST00000480055 FMN1Q68DA7 1419 aa17.21■□□□□ 0.34
SMURF1-204ENST00000480055 ITSN2Q9NZM3 1697 aa17.2■□□□□ 0.34
SMURF1-204ENST00000480055 PREX2Q70Z35 1606 aa17.2■□□□□ 0.34
SMURF1-204ENST00000480055 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
SMURF1-204ENST00000480055 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
SMURF1-204ENST00000480055 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
SMURF1-204ENST00000480055 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
SMURF1-204ENST00000480055 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
SMURF1-204ENST00000480055 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
SMURF1-204ENST00000480055 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
SMURF1-204ENST00000480055 ABCC1P33527 1531 aa17.15■□□□□ 0.34
SMURF1-204ENST00000480055 AGLP35573 1532 aa17.15■□□□□ 0.34
SMURF1-204ENST00000480055 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
SMURF1-204ENST00000480055 KIDINS220Q9ULH0 1771 aa17.14■□□□□ 0.33
SMURF1-204ENST00000480055 MLH3Q9UHC1 1453 aa17.13■□□□□ 0.33
SMURF1-204ENST00000480055 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
SMURF1-204ENST00000480055 SPATA31D1Q6ZQQ2 1576 aa17.13■□□□□ 0.33
SMURF1-204ENST00000480055 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
SMURF1-204ENST00000480055 CLIP1P30622 1438 aa17.13■□□□□ 0.33
SMURF1-204ENST00000480055 APLP2Q06481 763 aa17.12■□□□□ 0.33
SMURF1-204ENST00000480055 PTPRTO14522 1441 aa17.12■□□□□ 0.33
SMURF1-204ENST00000480055 LTBP4Q8N2S1 1624 aa17.11■□□□□ 0.33
SMURF1-204ENST00000480055 CDK11AQ9UQ88 783 aaPredicted RBP17.11■□□□□ 0.33
SMURF1-204ENST00000480055 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
SMURF1-204ENST00000480055 DISP3Q9P2K9 1392 aa17.09■□□□□ 0.33
SMURF1-204ENST00000480055 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
SMURF1-204ENST00000480055 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
SMURF1-204ENST00000480055 ZNF142P52746 1687 aaPredicted RBP17.06■□□□□ 0.32
SMURF1-204ENST00000480055 TRAPPC8Q9Y2L5 1435 aa17.05■□□□□ 0.32
SMURF1-204ENST00000480055 ILDR2Q71H61 639 aa17.05■□□□□ 0.32
SMURF1-204ENST00000480055 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
SMURF1-204ENST00000480055 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
SMURF1-204ENST00000480055 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
SMURF1-204ENST00000480055 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
SMURF1-204ENST00000480055 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
SMURF1-204ENST00000480055 SOCS7O14512 581 aa17.02■□□□□ 0.32
SMURF1-204ENST00000480055 CAMSAP1Q5T5Y3 1602 aa17.02■□□□□ 0.31
SMURF1-204ENST00000480055 MYO3AQ8NEV4 1616 aa17.02■□□□□ 0.31
SMURF1-204ENST00000480055 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
SMURF1-204ENST00000480055 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
SMURF1-204ENST00000480055 NPATQ14207 1427 aa17■□□□□ 0.31
SMURF1-204ENST00000480055 INO80Q9ULG1 1556 aaPredicted RBP16.99■□□□□ 0.31
SMURF1-204ENST00000480055 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
SMURF1-204ENST00000480055 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
SMURF1-204ENST00000480055 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
SMURF1-204ENST00000480055 SYCP2Q9BX26 1530 aa16.98■□□□□ 0.31
SMURF1-204ENST00000480055 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
SMURF1-204ENST00000480055 ATP7AQ04656 1500 aa16.96■□□□□ 0.3
SMURF1-204ENST00000480055 FYCO1Q9BQS8 1478 aa16.95■□□□□ 0.3
SMURF1-204ENST00000480055 ADGBQ8N7X0 1667 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms