RNA–Protein interactions for RNA: ENST00000479991.1

RTL5-201, Transcript of retrotransposon Gag like 5, humanhuman

TSL 1 (best)

Gene RTL5, Length 4,339 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL5-201ENST00000479991 HNRNPMP52272 730 aaKnown RBP eCLIP16.93■□□□□ 0.3
RTL5-201ENST00000479991 PLIN1O60240 522 aa16.93■□□□□ 0.3
RTL5-201ENST00000479991 CCDC184Q52MB2 194 aa16.92■□□□□ 0.3
RTL5-201ENST00000479991 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
RTL5-201ENST00000479991 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
RTL5-201ENST00000479991 NUDCQ9Y266 331 aa16.9■□□□□ 0.3
RTL5-201ENST00000479991 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.3
RTL5-201ENST00000479991 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.3
RTL5-201ENST00000479991 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
RTL5-201ENST00000479991 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
RTL5-201ENST00000479991 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
RTL5-201ENST00000479991 CCDC18Q5T9S5 1454 aa16.87■□□□□ 0.29
RTL5-201ENST00000479991 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
RTL5-201ENST00000479991 TMF1P82094 1093 aa16.86■□□□□ 0.29
RTL5-201ENST00000479991 SLC4A3P48751 1232 aa16.85■□□□□ 0.29
RTL5-201ENST00000479991 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
RTL5-201ENST00000479991 CCDC146Q8IYE0 955 aa16.84■□□□□ 0.29
RTL5-201ENST00000479991 EXOC6Q8TAG9 804 aa16.84■□□□□ 0.29
RTL5-201ENST00000479991 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
RTL5-201ENST00000479991 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
RTL5-201ENST00000479991 U2SURPO15042 1029 aaKnown RBP16.81■□□□□ 0.28
RTL5-201ENST00000479991 KIF7Q2M1P5 1343 aa16.79■□□□□ 0.28
RTL5-201ENST00000479991 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
RTL5-201ENST00000479991 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
RTL5-201ENST00000479991 IPO9Q96P70 1041 aaKnown RBP16.78■□□□□ 0.28
RTL5-201ENST00000479991 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
RTL5-201ENST00000479991 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
RTL5-201ENST00000479991 ERICH6BQ5W0A0 696 aa16.77■□□□□ 0.28
RTL5-201ENST00000479991 CDCA8Q53HL2 280 aa16.77■□□□□ 0.28
RTL5-201ENST00000479991 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
RTL5-201ENST00000479991 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.27
RTL5-201ENST00000479991 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.27
RTL5-201ENST00000479991 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
RTL5-201ENST00000479991 ZBED9Q6R2W3 1325 aa16.76■□□□□ 0.27
RTL5-201ENST00000479991 CLUAP1Q96AJ1 413 aa16.76■□□□□ 0.27
RTL5-201ENST00000479991 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
RTL5-201ENST00000479991 BECN1Q14457 450 aa16.75■□□□□ 0.27
RTL5-201ENST00000479991 PANK3Q9H999 370 aa16.75■□□□□ 0.27
RTL5-201ENST00000479991 NUTM2DQ5VT03 806 aaPredicted RBP16.74■□□□□ 0.27
RTL5-201ENST00000479991 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
RTL5-201ENST00000479991 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
RTL5-201ENST00000479991 RALBP1Q15311 655 aa16.74■□□□□ 0.27
RTL5-201ENST00000479991 USP47Q96K76 1375 aa16.74■□□□□ 0.27
RTL5-201ENST00000479991 GGT6Q6P531 493 aa16.73■□□□□ 0.27
RTL5-201ENST00000479991 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
RTL5-201ENST00000479991 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
RTL5-201ENST00000479991 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
RTL5-201ENST00000479991 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
RTL5-201ENST00000479991 CCDC7Q96M83 1385 aa16.72■□□□□ 0.27
RTL5-201ENST00000479991 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
RTL5-201ENST00000479991 STK26Q9P289 416 aa16.72■□□□□ 0.27
RTL5-201ENST00000479991 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
RTL5-201ENST00000479991 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.27
RTL5-201ENST00000479991 PCF11O94913 1555 aaKnown RBP16.71■□□□□ 0.27
RTL5-201ENST00000479991 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
RTL5-201ENST00000479991 MAP3K1Q13233 1512 aa16.71■□□□□ 0.26
RTL5-201ENST00000479991 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
RTL5-201ENST00000479991 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
RTL5-201ENST00000479991 TCERG1O14776 1098 aaKnown RBP16.7■□□□□ 0.26
RTL5-201ENST00000479991 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
RTL5-201ENST00000479991 PDE4AP27815 886 aa16.69■□□□□ 0.26
RTL5-201ENST00000479991 BCL2L13Q9BXK5 485 aa16.69■□□□□ 0.26
RTL5-201ENST00000479991 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
RTL5-201ENST00000479991 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
RTL5-201ENST00000479991 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
RTL5-201ENST00000479991 SOX12O15370 315 aa16.68■□□□□ 0.26
RTL5-201ENST00000479991 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
RTL5-201ENST00000479991 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
RTL5-201ENST00000479991 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
RTL5-201ENST00000479991 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
RTL5-201ENST00000479991 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
RTL5-201ENST00000479991 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
RTL5-201ENST00000479991 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
RTL5-201ENST00000479991 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
RTL5-201ENST00000479991 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
RTL5-201ENST00000479991 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
RTL5-201ENST00000479991 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
RTL5-201ENST00000479991 POGKQ9P215 609 aa16.65■□□□□ 0.26
RTL5-201ENST00000479991 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
RTL5-201ENST00000479991 MYOM3Q5VTT5 1437 aa16.65■□□□□ 0.26
RTL5-201ENST00000479991 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
RTL5-201ENST00000479991 GOLGA2Q08379 1002 aa16.64■□□□□ 0.26
RTL5-201ENST00000479991 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
RTL5-201ENST00000479991 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
RTL5-201ENST00000479991 SRPK2P78362 688 aaKnown RBP16.64■□□□□ 0.25
RTL5-201ENST00000479991 KIF3BO15066 747 aa16.64■□□□□ 0.25
RTL5-201ENST00000479991 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
RTL5-201ENST00000479991 MYH16Q9H6N6 1097 aa16.63■□□□□ 0.25
RTL5-201ENST00000479991 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
RTL5-201ENST00000479991 EFCAB5A4FU69 1503 aa16.63■□□□□ 0.25
RTL5-201ENST00000479991 AKNAQ7Z591 1439 aa16.63■□□□□ 0.25
RTL5-201ENST00000479991 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
RTL5-201ENST00000479991 MSH5O43196 834 aa16.62■□□□□ 0.25
RTL5-201ENST00000479991 APBB1O00213 710 aa16.61■□□□□ 0.25
RTL5-201ENST00000479991 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
RTL5-201ENST00000479991 KIF15Q9NS87 1388 aa16.61■□□□□ 0.25
RTL5-201ENST00000479991 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
RTL5-201ENST00000479991 APAF1O14727 1248 aa16.6■□□□□ 0.25
RTL5-201ENST00000479991 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
RTL5-201ENST00000479991 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms