RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
CCDC58-205ENST00000479899 POLA2Q14181 598 aa18.28■□□□□ 0.52
CCDC58-205ENST00000479899 SAMD9Q5K651 1589 aa18.28■□□□□ 0.52
CCDC58-205ENST00000479899 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
CCDC58-205ENST00000479899 ADAMTSL3P82987 1691 aa18.22■□□□□ 0.51
CCDC58-205ENST00000479899 RAPGEF3O95398 923 aa18.21■□□□□ 0.51
CCDC58-205ENST00000479899 FRMPD1Q5SYB0 1578 aa18.21■□□□□ 0.51
CCDC58-205ENST00000479899 PTPRMP28827 1452 aa18.2■□□□□ 0.5
CCDC58-205ENST00000479899 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
CCDC58-205ENST00000479899 NEO1Q92859 1461 aa18.19■□□□□ 0.5
CCDC58-205ENST00000479899 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
CCDC58-205ENST00000479899 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
CCDC58-205ENST00000479899 FHOD3Q2V2M9 1422 aa18.17■□□□□ 0.5
CCDC58-205ENST00000479899 ARID4BQ4LE39 1312 aaPredicted RBP18.17■□□□□ 0.5
CCDC58-205ENST00000479899 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
CCDC58-205ENST00000479899 RIMS1Q86UR5 1692 aaKnown RBP18.13■□□□□ 0.49
CCDC58-205ENST00000479899 ARHGEF40Q8TER5 1519 aa18.13■□□□□ 0.49
CCDC58-205ENST00000479899 RICTORQ6R327 1708 aa18.11■□□□□ 0.49
CCDC58-205ENST00000479899 CFAP74Q9C0B2 1584 aa18.1■□□□□ 0.49
CCDC58-205ENST00000479899 PCF11O94913 1555 aaKnown RBP18.09■□□□□ 0.49
CCDC58-205ENST00000479899 TTC37Q6PGP7 1564 aa18.09■□□□□ 0.49
CCDC58-205ENST00000479899 DENND4BO75064 1496 aaPredicted RBP18.09■□□□□ 0.49
CCDC58-205ENST00000479899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.07■□□□□ 0.48
CCDC58-205ENST00000479899 FANCAO15360 1455 aa18.07■□□□□ 0.48
CCDC58-205ENST00000479899 FBXO41Q8TF61 875 aa18.06■□□□□ 0.48
CCDC58-205ENST00000479899 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
CCDC58-205ENST00000479899 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
CCDC58-205ENST00000479899 LMTK3Q96Q04 1460 aa18.05■□□□□ 0.48
CCDC58-205ENST00000479899 EEA1Q15075 1411 aa18.05■□□□□ 0.48
CCDC58-205ENST00000479899 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
CCDC58-205ENST00000479899 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
CCDC58-205ENST00000479899 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
CCDC58-205ENST00000479899 ZFYVE16Q7Z3T8 1539 aa18.03■□□□□ 0.48
CCDC58-205ENST00000479899 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
CCDC58-205ENST00000479899 ZMYM4Q5VZL5 1548 aa18.01■□□□□ 0.47
CCDC58-205ENST00000479899 YEATS2Q9ULM3 1422 aa18■□□□□ 0.47
CCDC58-205ENST00000479899 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
CCDC58-205ENST00000479899 HECW1Q76N89 1606 aa17.98■□□□□ 0.47
CCDC58-205ENST00000479899 MLECQ14165 292 aa17.98■□□□□ 0.47
CCDC58-205ENST00000479899 POGZQ7Z3K3 1410 aa17.98■□□□□ 0.47
CCDC58-205ENST00000479899 HSPA2P54652 639 aa17.97■□□□□ 0.47
CCDC58-205ENST00000479899 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
CCDC58-205ENST00000479899 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
CCDC58-205ENST00000479899 SCAPERQ9BY12 1400 aa17.92■□□□□ 0.46
CCDC58-205ENST00000479899 KIF14Q15058 1648 aa17.9■□□□□ 0.46
CCDC58-205ENST00000479899 MAGI2Q86UL8 1455 aa17.9■□□□□ 0.46
CCDC58-205ENST00000479899 PLCH2O75038 1416 aa17.89■□□□□ 0.46
CCDC58-205ENST00000479899 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
CCDC58-205ENST00000479899 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
CCDC58-205ENST00000479899 ARHGAP5Q13017 1502 aa17.85■□□□□ 0.45
CCDC58-205ENST00000479899 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
CCDC58-205ENST00000479899 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
CCDC58-205ENST00000479899 ARHGEF12Q9NZN5 1544 aa17.84■□□□□ 0.45
CCDC58-205ENST00000479899 ATP10AO60312 1499 aa17.84■□□□□ 0.45
CCDC58-205ENST00000479899 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
CCDC58-205ENST00000479899 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
CCDC58-205ENST00000479899 MKRN4PQ13434 485 aaPredicted RBP17.83■□□□□ 0.44
CCDC58-205ENST00000479899 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
CCDC58-205ENST00000479899 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
CCDC58-205ENST00000479899 CEBPAP49715 358 aaPredicted RBP17.8■□□□□ 0.44
CCDC58-205ENST00000479899 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
CCDC58-205ENST00000479899 CDK11AQ9UQ88 783 aaPredicted RBP17.79■□□□□ 0.44
CCDC58-205ENST00000479899 CLIP1P30622 1438 aa17.79■□□□□ 0.44
CCDC58-205ENST00000479899 TROQ12816 1431 aaPredicted RBP17.79■□□□□ 0.44
CCDC58-205ENST00000479899 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
CCDC58-205ENST00000479899 CERKQ8TCT0 537 aa17.78■□□□□ 0.44
CCDC58-205ENST00000479899 KDM5CP41229 1560 aa17.78■□□□□ 0.44
CCDC58-205ENST00000479899 ABCA6Q8N139 1617 aa17.77■□□□□ 0.44
CCDC58-205ENST00000479899 CDC42BPBQ9Y5S2 1711 aa17.77■□□□□ 0.44
CCDC58-205ENST00000479899 AFAP1Q8N556 730 aa17.75■□□□□ 0.43
CCDC58-205ENST00000479899 PREX2Q70Z35 1606 aa17.75■□□□□ 0.43
CCDC58-205ENST00000479899 UHRF1BP1Q6BDS2 1440 aa17.73■□□□□ 0.43
CCDC58-205ENST00000479899 C3P01024 1663 aa17.73■□□□□ 0.43
CCDC58-205ENST00000479899 ITSN2Q9NZM3 1697 aa17.73■□□□□ 0.43
CCDC58-205ENST00000479899 STRCQ7RTU9 1775 aa17.73■□□□□ 0.43
CCDC58-205ENST00000479899 ABCC1P33527 1531 aa17.72■□□□□ 0.43
CCDC58-205ENST00000479899 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
CCDC58-205ENST00000479899 CDC42BPAQ5VT25 1732 aa17.68■□□□□ 0.42
CCDC58-205ENST00000479899 TRAPPC8Q9Y2L5 1435 aa17.68■□□□□ 0.42
CCDC58-205ENST00000479899 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
CCDC58-205ENST00000479899 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
CCDC58-205ENST00000479899 MLH3Q9UHC1 1453 aa17.66■□□□□ 0.42
CCDC58-205ENST00000479899 KIDINS220Q9ULH0 1771 aa17.66■□□□□ 0.42
CCDC58-205ENST00000479899 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
CCDC58-205ENST00000479899 AGLP35573 1532 aa17.63■□□□□ 0.41
CCDC58-205ENST00000479899 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
CCDC58-205ENST00000479899 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
CCDC58-205ENST00000479899 SAMD9LQ8IVG5 1584 aa17.61■□□□□ 0.41
CCDC58-205ENST00000479899 SETD1BQ9UPS6 1966 aaKnown RBP17.6■□□□□ 0.41
CCDC58-205ENST00000479899 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
CCDC58-205ENST00000479899 DISP3Q9P2K9 1392 aa17.59■□□□□ 0.41
CCDC58-205ENST00000479899 FYCO1Q9BQS8 1478 aa17.58■□□□□ 0.41
CCDC58-205ENST00000479899 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
CCDC58-205ENST00000479899 PTPRTO14522 1441 aa17.56■□□□□ 0.4
CCDC58-205ENST00000479899 MROH2AA6NES4 1674 aa17.56■□□□□ 0.4
CCDC58-205ENST00000479899 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
CCDC58-205ENST00000479899 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
CCDC58-205ENST00000479899 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
CCDC58-205ENST00000479899 SPATA31D1Q6ZQQ2 1576 aa17.54■□□□□ 0.4
CCDC58-205ENST00000479899 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms