RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-208ENST00000479530 KIAA0586Q9BVV6 1533 aa18.46■□□□□ 0.55
PDZRN3-208ENST00000479530 MIA2Q96PC5 1412 aa18.46■□□□□ 0.55
PDZRN3-208ENST00000479530 WASHC2AQ641Q2 1341 aa18.45■□□□□ 0.54
PDZRN3-208ENST00000479530 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
PDZRN3-208ENST00000479530 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-208ENST00000479530 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-208ENST00000479530 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-208ENST00000479530 ABCC5O15440 1437 aa18.44■□□□□ 0.54
PDZRN3-208ENST00000479530 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-208ENST00000479530 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
PDZRN3-208ENST00000479530 GRIN2AQ12879 1464 aa18.42■□□□□ 0.54
PDZRN3-208ENST00000479530 DAPK1P53355 1430 aa18.42■□□□□ 0.54
PDZRN3-208ENST00000479530 NBPF8Q3BBV2 869 aa18.42■□□□□ 0.54
PDZRN3-208ENST00000479530 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
PDZRN3-208ENST00000479530 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
PDZRN3-208ENST00000479530 PLB1Q6P1J6 1458 aa18.4■□□□□ 0.54
PDZRN3-208ENST00000479530 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-208ENST00000479530 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
PDZRN3-208ENST00000479530 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
PDZRN3-208ENST00000479530 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
PDZRN3-208ENST00000479530 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
PDZRN3-208ENST00000479530 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
PDZRN3-208ENST00000479530 ANKRD30BQ9BXX2 1392 aa18.36■□□□□ 0.53
PDZRN3-208ENST00000479530 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDZRN3-208ENST00000479530 JPH4Q96JJ6 628 aa18.36■□□□□ 0.53
PDZRN3-208ENST00000479530 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.53
PDZRN3-208ENST00000479530 RAPGEF6Q8TEU7 1601 aa18.33■□□□□ 0.52
PDZRN3-208ENST00000479530 ROCK1Q13464 1354 aa18.32■□□□□ 0.52
PDZRN3-208ENST00000479530 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
PDZRN3-208ENST00000479530 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
PDZRN3-208ENST00000479530 PPP4R2Q9NY27 417 aa18.31■□□□□ 0.52
PDZRN3-208ENST00000479530 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
PDZRN3-208ENST00000479530 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
PDZRN3-208ENST00000479530 GPATCH8Q9UKJ3 1502 aaKnown RBP18.28■□□□□ 0.52
PDZRN3-208ENST00000479530 DNMT1P26358 1616 aaKnown RBP18.28■□□□□ 0.52
PDZRN3-208ENST00000479530 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.51
PDZRN3-208ENST00000479530 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.51
PDZRN3-208ENST00000479530 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
PDZRN3-208ENST00000479530 CAMSAP2Q08AD1 1489 aa18.26■□□□□ 0.51
PDZRN3-208ENST00000479530 NCOA1Q15788 1441 aa18.26■□□□□ 0.51
PDZRN3-208ENST00000479530 KIF14Q15058 1648 aa18.26■□□□□ 0.51
PDZRN3-208ENST00000479530 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
PDZRN3-208ENST00000479530 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-208ENST00000479530 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-208ENST00000479530 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
PDZRN3-208ENST00000479530 PZPP20742 1482 aa18.24■□□□□ 0.51
PDZRN3-208ENST00000479530 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
PDZRN3-208ENST00000479530 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
PDZRN3-208ENST00000479530 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
PDZRN3-208ENST00000479530 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
PDZRN3-208ENST00000479530 PKD2Q13563 968 aa18.23■□□□□ 0.51
PDZRN3-208ENST00000479530 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
PDZRN3-208ENST00000479530 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
PDZRN3-208ENST00000479530 NUP160Q12769 1436 aa18.2■□□□□ 0.5
PDZRN3-208ENST00000479530 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
PDZRN3-208ENST00000479530 CARMIL2Q6F5E8 1435 aa18.18■□□□□ 0.5
PDZRN3-208ENST00000479530 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDZRN3-208ENST00000479530 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
PDZRN3-208ENST00000479530 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
PDZRN3-208ENST00000479530 ATP10BO94823 1461 aa18.17■□□□□ 0.5
PDZRN3-208ENST00000479530 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
PDZRN3-208ENST00000479530 DEKP35659 375 aaKnown RBP18.15■□□□□ 0.5
PDZRN3-208ENST00000479530 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
PDZRN3-208ENST00000479530 ANKRD50Q9ULJ7 1429 aa18.13■□□□□ 0.49
PDZRN3-208ENST00000479530 ANKRD30AQ9BXX3 1397 aa18.13■□□□□ 0.49
PDZRN3-208ENST00000479530 KIAA1107Q9UPP5 1409 aa18.13■□□□□ 0.49
PDZRN3-208ENST00000479530 NUP155O75694 1391 aa18.12■□□□□ 0.49
PDZRN3-208ENST00000479530 NBR1Q14596 966 aa18.11■□□□□ 0.49
PDZRN3-208ENST00000479530 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
PDZRN3-208ENST00000479530 ABCC10Q5T3U5 1492 aa18.1■□□□□ 0.49
PDZRN3-208ENST00000479530 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
PDZRN3-208ENST00000479530 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
PDZRN3-208ENST00000479530 ABCA8O94911 1581 aa18.08■□□□□ 0.48
PDZRN3-208ENST00000479530 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.48
PDZRN3-208ENST00000479530 TSPY4P0CV99 314 aa18.08■□□□□ 0.48
PDZRN3-208ENST00000479530 TSPY10P0CW01 314 aa18.08■□□□□ 0.48
PDZRN3-208ENST00000479530 USP47Q96K76 1375 aa18.07■□□□□ 0.48
PDZRN3-208ENST00000479530 ADCY10Q96PN6 1610 aa18.05■□□□□ 0.48
PDZRN3-208ENST00000479530 PTPRGP23470 1445 aa18.05■□□□□ 0.48
PDZRN3-208ENST00000479530 MBD5Q9P267 1494 aa18.05■□□□□ 0.48
PDZRN3-208ENST00000479530 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
PDZRN3-208ENST00000479530 CDC42BPAQ5VT25 1732 aa18.03■□□□□ 0.48
PDZRN3-208ENST00000479530 KIF15Q9NS87 1388 aa18.03■□□□□ 0.48
PDZRN3-208ENST00000479530 DHX29Q7Z478 1369 aaKnown RBP18.02■□□□□ 0.48
PDZRN3-208ENST00000479530 MYT1LQ9UL68 1186 aa18.02■□□□□ 0.48
PDZRN3-208ENST00000479530 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.47
PDZRN3-208ENST00000479530 SMG6Q86US8 1419 aaKnown RBP18.01■□□□□ 0.47
PDZRN3-208ENST00000479530 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
PDZRN3-208ENST00000479530 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
PDZRN3-208ENST00000479530 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
PDZRN3-208ENST00000479530 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
PDZRN3-208ENST00000479530 CCDC136Q96JN2 1154 aa18■□□□□ 0.47
PDZRN3-208ENST00000479530 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
PDZRN3-208ENST00000479530 ST20-MTHFSA0A0A6YYL1 179 aa17.99■□□□□ 0.47
PDZRN3-208ENST00000479530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDZRN3-208ENST00000479530 RNF123Q5XPI4 1314 aa17.97■□□□□ 0.47
PDZRN3-208ENST00000479530 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
PDZRN3-208ENST00000479530 POLR1AO95602 1720 aaPredicted RBP17.95■□□□□ 0.46
PDZRN3-208ENST00000479530 IPO9Q96P70 1041 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms