RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 TTC37Q6PGP7 1564 aa9.64□□□□□ -0.87
CNOT10-215ENST00000479397 FANCAO15360 1455 aa9.64□□□□□ -0.87
CNOT10-215ENST00000479397 CFAP74Q9C0B2 1584 aa9.63□□□□□ -0.87
CNOT10-215ENST00000479397 RAPGEF3O95398 923 aa9.62□□□□□ -0.87
CNOT10-215ENST00000479397 C1QBPQ07021 282 aaKnown RBP9.61□□□□□ -0.87
CNOT10-215ENST00000479397 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
CNOT10-215ENST00000479397 SIGLEC1Q9BZZ2 1709 aa9.6□□□□□ -0.87
CNOT10-215ENST00000479397 EFCAB5A4FU69 1503 aa9.6□□□□□ -0.87
CNOT10-215ENST00000479397 YEATS2Q9ULM3 1422 aa9.59□□□□□ -0.87
CNOT10-215ENST00000479397 ZMYM4Q5VZL5 1548 aa9.58□□□□□ -0.88
CNOT10-215ENST00000479397 IQSEC2Q5JU85 1478 aa9.58□□□□□ -0.88
CNOT10-215ENST00000479397 AKNAQ7Z591 1439 aa9.57□□□□□ -0.88
CNOT10-215ENST00000479397 ZFYVE16Q7Z3T8 1539 aa9.57□□□□□ -0.88
CNOT10-215ENST00000479397 DENND4BO75064 1496 aaPredicted RBP9.57□□□□□ -0.88
CNOT10-215ENST00000479397 ATP10BO94823 1461 aa9.57□□□□□ -0.88
CNOT10-215ENST00000479397 RAPGEF6Q8TEU7 1601 aa9.55□□□□□ -0.88
CNOT10-215ENST00000479397 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
CNOT10-215ENST00000479397 MAGI2Q86UL8 1455 aa9.54□□□□□ -0.88
CNOT10-215ENST00000479397 ARHGEF12Q9NZN5 1544 aa9.53□□□□□ -0.88
CNOT10-215ENST00000479397 UHRF1BP1Q6BDS2 1440 aa9.53□□□□□ -0.88
CNOT10-215ENST00000479397 ARID3CA6NKF2 412 aa9.52□□□□□ -0.89
CNOT10-215ENST00000479397 PTPRTO14522 1441 aa9.52□□□□□ -0.89
CNOT10-215ENST00000479397 LTBP4Q8N2S1 1624 aa9.52□□□□□ -0.89
CNOT10-215ENST00000479397 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
CNOT10-215ENST00000479397 SLC4A2P04920 1241 aa9.51□□□□□ -0.89
CNOT10-215ENST00000479397 HECW1Q76N89 1606 aa9.51□□□□□ -0.89
CNOT10-215ENST00000479397 C3P01024 1663 aa9.51□□□□□ -0.89
CNOT10-215ENST00000479397 MLECQ14165 292 aa9.5□□□□□ -0.89
CNOT10-215ENST00000479397 U3KPZ7 1027 aaPredicted RBP9.49□□□□□ -0.89
CNOT10-215ENST00000479397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.48□□□□□ -0.89
CNOT10-215ENST00000479397 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
CNOT10-215ENST00000479397 SAMD9Q5K651 1589 aa9.48□□□□□ -0.89
CNOT10-215ENST00000479397 MYO5CQ9NQX4 1742 aa9.47□□□□□ -0.89
CNOT10-215ENST00000479397 C9orf84Q5VXU9 1444 aa9.47□□□□□ -0.89
CNOT10-215ENST00000479397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.46□□□□□ -0.89
CNOT10-215ENST00000479397 MED1Q15648 1581 aaPredicted RBP9.46□□□□□ -0.89
CNOT10-215ENST00000479397 ATP10AO60312 1499 aa9.46□□□□□ -0.9
CNOT10-215ENST00000479397 CEBPAP49715 358 aaPredicted RBP9.44□□□□□ -0.9
CNOT10-215ENST00000479397 NUP153P49790 1475 aaKnown RBP9.43□□□□□ -0.9
CNOT10-215ENST00000479397 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
CNOT10-215ENST00000479397 PLEKHD1A6NEE1 506 aa9.42□□□□□ -0.9
CNOT10-215ENST00000479397 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
CNOT10-215ENST00000479397 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
CNOT10-215ENST00000479397 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
CNOT10-215ENST00000479397 MROH2AA6NES4 1674 aa9.41□□□□□ -0.9
CNOT10-215ENST00000479397 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
CNOT10-215ENST00000479397 PRXQ9BXM0 1461 aa9.4□□□□□ -0.9
CNOT10-215ENST00000479397 SCAPERQ9BY12 1400 aa9.4□□□□□ -0.9
CNOT10-215ENST00000479397 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
CNOT10-215ENST00000479397 SLC4A1APQ9BWU0 796 aaKnown RBP9.39□□□□□ -0.91
CNOT10-215ENST00000479397 ZNF518AQ6AHZ1 1483 aa9.39□□□□□ -0.91
CNOT10-215ENST00000479397 TRAPPC8Q9Y2L5 1435 aa9.39□□□□□ -0.91
CNOT10-215ENST00000479397 KDM5CP41229 1560 aa9.38□□□□□ -0.91
CNOT10-215ENST00000479397 DIP2CQ9Y2E4 1556 aa9.38□□□□□ -0.91
CNOT10-215ENST00000479397 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
CNOT10-215ENST00000479397 AGLP35573 1532 aa9.37□□□□□ -0.91
CNOT10-215ENST00000479397 ABCA6Q8N139 1617 aa9.37□□□□□ -0.91
CNOT10-215ENST00000479397 PLCH2O75038 1416 aa9.37□□□□□ -0.91
CNOT10-215ENST00000479397 POLR1AO95602 1720 aaPredicted RBP9.36□□□□□ -0.91
CNOT10-215ENST00000479397 MYO3AQ8NEV4 1616 aa9.35□□□□□ -0.91
CNOT10-215ENST00000479397 CNTLNQ9NXG0 1405 aa9.35□□□□□ -0.91
CNOT10-215ENST00000479397 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
CNOT10-215ENST00000479397 PLA2R1Q13018 1463 aa9.34□□□□□ -0.91
CNOT10-215ENST00000479397 NPATQ14207 1427 aa9.33□□□□□ -0.92
CNOT10-215ENST00000479397 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
CNOT10-215ENST00000479397 CDC42BPBQ9Y5S2 1711 aa9.33□□□□□ -0.92
CNOT10-215ENST00000479397 KIF14Q15058 1648 aa9.32□□□□□ -0.92
CNOT10-215ENST00000479397 HSPA1LP34931 641 aa9.32□□□□□ -0.92
CNOT10-215ENST00000479397 EFCAB2Q5VUJ9 269 aa9.32□□□□□ -0.92
CNOT10-215ENST00000479397 SPINK5Q9NQ38 1064 aaPredicted RBP9.32□□□□□ -0.92
CNOT10-215ENST00000479397 CLTCQ00610 1675 aaKnown RBP9.32□□□□□ -0.92
CNOT10-215ENST00000479397 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
CNOT10-215ENST00000479397 ARHGAP5Q13017 1502 aa9.31□□□□□ -0.92
CNOT10-215ENST00000479397 TOM1O60784 492 aa9.31□□□□□ -0.92
CNOT10-215ENST00000479397 PKD2Q13563 968 aa9.31□□□□□ -0.92
CNOT10-215ENST00000479397 CEP170BQ9Y4F5 1589 aaPredicted RBP9.31□□□□□ -0.92
CNOT10-215ENST00000479397 KIDINS220Q9ULH0 1771 aa9.31□□□□□ -0.92
CNOT10-215ENST00000479397 CPS1P31327 1500 aa9.31□□□□□ -0.92
CNOT10-215ENST00000479397 CDK13Q14004 1512 aaKnown RBP9.31□□□□□ -0.92
CNOT10-215ENST00000479397 MLH3Q9UHC1 1453 aa9.3□□□□□ -0.92
CNOT10-215ENST00000479397 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
CNOT10-215ENST00000479397 NCKAP5LQ9HCH0 1330 aa9.3□□□□□ -0.92
CNOT10-215ENST00000479397 TCOF1Q13428 1488 aaKnown RBP9.29□□□□□ -0.92
CNOT10-215ENST00000479397 CAPN15O75808 1086 aa9.28□□□□□ -0.92
CNOT10-215ENST00000479397 PREX2Q70Z35 1606 aa9.27□□□□□ -0.92
CNOT10-215ENST00000479397 AFAP1Q8N556 730 aa9.27□□□□□ -0.93
CNOT10-215ENST00000479397 PTPRKQ15262 1439 aa9.27□□□□□ -0.93
CNOT10-215ENST00000479397 ABCC1P33527 1531 aa9.26□□□□□ -0.93
CNOT10-215ENST00000479397 DNMT1P26358 1616 aaKnown RBP9.25□□□□□ -0.93
CNOT10-215ENST00000479397 CDK11AQ9UQ88 783 aaPredicted RBP9.25□□□□□ -0.93
CNOT10-215ENST00000479397 CDC42BPAQ5VT25 1732 aa9.25□□□□□ -0.93
CNOT10-215ENST00000479397 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
CNOT10-215ENST00000479397 SHANK2Q9UPX8 1470 aa9.24□□□□□ -0.93
CNOT10-215ENST00000479397 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
CNOT10-215ENST00000479397 LRRIQ1Q96JM4 1722 aa9.24□□□□□ -0.93
CNOT10-215ENST00000479397 CLIP1P30622 1438 aa9.23□□□□□ -0.93
CNOT10-215ENST00000479397 RNF17Q9BXT8 1623 aaKnown RBP9.23□□□□□ -0.93
CNOT10-215ENST00000479397 NEURL4Q96JN8 1562 aa9.22□□□□□ -0.93
CNOT10-215ENST00000479397 SYNMO15061 1565 aa9.21□□□□□ -0.93
CNOT10-215ENST00000479397 ALKQ9UM73 1620 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms