RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 AKNAQ7Z591 1439 aa16.83■□□□□ 0.28
CDK11A-216ENST00000479362 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
CDK11A-216ENST00000479362 DENND4BO75064 1496 aaPredicted RBP16.82■□□□□ 0.28
CDK11A-216ENST00000479362 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
CDK11A-216ENST00000479362 UBTFP17480 764 aaKnown RBP16.82■□□□□ 0.28
CDK11A-216ENST00000479362 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
CDK11A-216ENST00000479362 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
CDK11A-216ENST00000479362 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
CDK11A-216ENST00000479362 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
CDK11A-216ENST00000479362 PTPRTO14522 1441 aa16.79■□□□□ 0.28
CDK11A-216ENST00000479362 MLECQ14165 292 aa16.77■□□□□ 0.28
CDK11A-216ENST00000479362 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
CDK11A-216ENST00000479362 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
CDK11A-216ENST00000479362 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
CDK11A-216ENST00000479362 MAGI2Q86UL8 1455 aa16.73■□□□□ 0.27
CDK11A-216ENST00000479362 UHRF1BP1Q6BDS2 1440 aa16.73■□□□□ 0.27
CDK11A-216ENST00000479362 CEBPAP49715 358 aaPredicted RBP16.73■□□□□ 0.27
CDK11A-216ENST00000479362 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
CDK11A-216ENST00000479362 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
CDK11A-216ENST00000479362 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
CDK11A-216ENST00000479362 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
CDK11A-216ENST00000479362 SAMD9Q5K651 1589 aa16.66■□□□□ 0.26
CDK11A-216ENST00000479362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDK11A-216ENST00000479362 CLIP1P30622 1438 aa16.65■□□□□ 0.26
CDK11A-216ENST00000479362 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
CDK11A-216ENST00000479362 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
CDK11A-216ENST00000479362 C3P01024 1663 aa16.65■□□□□ 0.26
CDK11A-216ENST00000479362 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
CDK11A-216ENST00000479362 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
CDK11A-216ENST00000479362 ATP10AO60312 1499 aa16.64■□□□□ 0.25
CDK11A-216ENST00000479362 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
CDK11A-216ENST00000479362 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
CDK11A-216ENST00000479362 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
CDK11A-216ENST00000479362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
CDK11A-216ENST00000479362 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
CDK11A-216ENST00000479362 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
CDK11A-216ENST00000479362 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
CDK11A-216ENST00000479362 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
CDK11A-216ENST00000479362 KCNA4P22459 653 aa16.53■□□□□ 0.24
CDK11A-216ENST00000479362 HSPA1LP34931 641 aa16.53■□□□□ 0.24
CDK11A-216ENST00000479362 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
CDK11A-216ENST00000479362 REREQ9P2R6 1566 aa16.51■□□□□ 0.23
CDK11A-216ENST00000479362 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
CDK11A-216ENST00000479362 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
CDK11A-216ENST00000479362 PLCH2O75038 1416 aa16.49■□□□□ 0.23
CDK11A-216ENST00000479362 KDM5CP41229 1560 aa16.49■□□□□ 0.23
CDK11A-216ENST00000479362 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
CDK11A-216ENST00000479362 FMN1Q68DA7 1419 aa16.46■□□□□ 0.23
CDK11A-216ENST00000479362 ABCA6Q8N139 1617 aa16.46■□□□□ 0.23
CDK11A-216ENST00000479362 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.23
CDK11A-216ENST00000479362 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
CDK11A-216ENST00000479362 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
CDK11A-216ENST00000479362 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
CDK11A-216ENST00000479362 AGLP35573 1532 aa16.45■□□□□ 0.22
CDK11A-216ENST00000479362 ZNF142P52746 1687 aaPredicted RBP16.44■□□□□ 0.22
CDK11A-216ENST00000479362 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
CDK11A-216ENST00000479362 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
CDK11A-216ENST00000479362 TCOF1Q13428 1488 aaKnown RBP16.42■□□□□ 0.22
CDK11A-216ENST00000479362 MROH2AA6NES4 1674 aa16.41■□□□□ 0.22
CDK11A-216ENST00000479362 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
CDK11A-216ENST00000479362 NPATQ14207 1427 aa16.41■□□□□ 0.22
CDK11A-216ENST00000479362 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
CDK11A-216ENST00000479362 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
CDK11A-216ENST00000479362 MYO3AQ8NEV4 1616 aa16.4■□□□□ 0.22
CDK11A-216ENST00000479362 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
CDK11A-216ENST00000479362 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
CDK11A-216ENST00000479362 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
CDK11A-216ENST00000479362 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
CDK11A-216ENST00000479362 AFAP1Q8N556 730 aa16.38■□□□□ 0.21
CDK11A-216ENST00000479362 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
CDK11A-216ENST00000479362 PKD2Q13563 968 aa16.36■□□□□ 0.21
CDK11A-216ENST00000479362 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
CDK11A-216ENST00000479362 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
CDK11A-216ENST00000479362 CEP170BQ9Y4F5 1589 aaPredicted RBP16.35■□□□□ 0.21
CDK11A-216ENST00000479362 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
CDK11A-216ENST00000479362 LRRIQ1Q96JM4 1722 aa16.35■□□□□ 0.21
CDK11A-216ENST00000479362 KIF14Q15058 1648 aa16.34■□□□□ 0.21
CDK11A-216ENST00000479362 TOM1O60784 492 aa16.33■□□□□ 0.2
CDK11A-216ENST00000479362 CPS1P31327 1500 aa16.33■□□□□ 0.2
CDK11A-216ENST00000479362 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
CDK11A-216ENST00000479362 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
CDK11A-216ENST00000479362 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
CDK11A-216ENST00000479362 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
CDK11A-216ENST00000479362 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
CDK11A-216ENST00000479362 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
CDK11A-216ENST00000479362 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
CDK11A-216ENST00000479362 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
CDK11A-216ENST00000479362 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
CDK11A-216ENST00000479362 MYT1LQ9UL68 1186 aa16.28■□□□□ 0.2
CDK11A-216ENST00000479362 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
CDK11A-216ENST00000479362 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
CDK11A-216ENST00000479362 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.2
CDK11A-216ENST00000479362 TIAM1Q13009 1591 aa16.27■□□□□ 0.2
CDK11A-216ENST00000479362 ABCC1P33527 1531 aa16.26■□□□□ 0.19
CDK11A-216ENST00000479362 PTPRKQ15262 1439 aa16.26■□□□□ 0.19
CDK11A-216ENST00000479362 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
CDK11A-216ENST00000479362 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
CDK11A-216ENST00000479362 DNMT1P26358 1616 aaKnown RBP16.24■□□□□ 0.19
CDK11A-216ENST00000479362 VWDEQ8N2E2 1590 aa16.24■□□□□ 0.19
CDK11A-216ENST00000479362 APLP2Q06481 763 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms