RNA–Protein interactions for RNA: ENST00000479249.5

CUTA-207, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 3

Gene CUTA, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-207ENST00000479249 CEBPAP49715 358 aaPredicted RBP13.98□□□□□ -0.17
CUTA-207ENST00000479249 ATP10BO94823 1461 aa13.95□□□□□ -0.18
CUTA-207ENST00000479249 CTTNBP2Q8WZ74 1663 aa13.94□□□□□ -0.18
CUTA-207ENST00000479249 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
CUTA-207ENST00000479249 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
CUTA-207ENST00000479249 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
CUTA-207ENST00000479249 ZNF335Q9H4Z2 1342 aaPredicted RBP13.92□□□□□ -0.18
CUTA-207ENST00000479249 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
CUTA-207ENST00000479249 ARID3CA6NKF2 412 aa13.91□□□□□ -0.18
CUTA-207ENST00000479249 C3P01024 1663 aa13.91□□□□□ -0.18
CUTA-207ENST00000479249 FAM9AQ8IZU1 332 aaPredicted RBP13.9□□□□□ -0.18
CUTA-207ENST00000479249 ATP10AO60312 1499 aa13.89□□□□□ -0.19
CUTA-207ENST00000479249 PIP4K2BP78356 416 aa13.89□□□□□ -0.19
CUTA-207ENST00000479249 CAMSAP1Q5T5Y3 1602 aa13.89□□□□□ -0.19
CUTA-207ENST00000479249 TOM1O60784 492 aa13.87□□□□□ -0.19
CUTA-207ENST00000479249 TRAPPC8Q9Y2L5 1435 aa13.87□□□□□ -0.19
CUTA-207ENST00000479249 SRCAPQ6ZRS2 3230 aa13.85□□□□□ -0.19
CUTA-207ENST00000479249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
CUTA-207ENST00000479249 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
CUTA-207ENST00000479249 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
CUTA-207ENST00000479249 NCKAP5LQ9HCH0 1330 aa13.79□□□□□ -0.2
CUTA-207ENST00000479249 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
CUTA-207ENST00000479249 CPS1P31327 1500 aa13.79□□□□□ -0.2
CUTA-207ENST00000479249 PKD2Q13563 968 aa13.78□□□□□ -0.2
CUTA-207ENST00000479249 ESF1Q9H501 851 aaKnown RBP13.78□□□□□ -0.2
CUTA-207ENST00000479249 RGS17Q9UGC6 210 aaPredicted RBP13.78□□□□□ -0.2
CUTA-207ENST00000479249 SCAPERQ9BY12 1400 aa13.78□□□□□ -0.2
CUTA-207ENST00000479249 SUPT6HQ7KZ85 1726 aaKnown RBP13.78□□□□□ -0.2
CUTA-207ENST00000479249 PTPRKQ15262 1439 aa13.77□□□□□ -0.21
CUTA-207ENST00000479249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■□□□□ 10.7
CUTA-207ENST00000479249 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
CUTA-207ENST00000479249 ZNF142P52746 1687 aaPredicted RBP13.75□□□□□ -0.21
CUTA-207ENST00000479249 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
CUTA-207ENST00000479249 NPATQ14207 1427 aa13.75□□□□□ -0.21
CUTA-207ENST00000479249 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
CUTA-207ENST00000479249 AGLP35573 1532 aa13.74□□□□□ -0.21
CUTA-207ENST00000479249 CNTLNQ9NXG0 1405 aa13.74□□□□□ -0.21
CUTA-207ENST00000479249 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
CUTA-207ENST00000479249 PLEKHD1A6NEE1 506 aa13.71□□□□□ -0.21
CUTA-207ENST00000479249 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
CUTA-207ENST00000479249 NUP153P49790 1475 aaKnown RBP13.71□□□□□ -0.21
CUTA-207ENST00000479249 ZNF518AQ6AHZ1 1483 aa13.71□□□□□ -0.21
CUTA-207ENST00000479249 MROH2AA6NES4 1674 aa13.71□□□□□ -0.21
CUTA-207ENST00000479249 MYO3AQ8NEV4 1616 aa13.71□□□□□ -0.22
CUTA-207ENST00000479249 ALKQ9UM73 1620 aa13.71□□□□□ -0.22
CUTA-207ENST00000479249 DIP2CQ9Y2E4 1556 aa13.71□□□□□ -0.22
CUTA-207ENST00000479249 KDM5CP41229 1560 aa13.69□□□□□ -0.22
CUTA-207ENST00000479249 CEP170BQ9Y4F5 1589 aaPredicted RBP13.69□□□□□ -0.22
CUTA-207ENST00000479249 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
CUTA-207ENST00000479249 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
CUTA-207ENST00000479249 PLCH2O75038 1416 aa13.66□□□□□ -0.22
CUTA-207ENST00000479249 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
CUTA-207ENST00000479249 ABCA6Q8N139 1617 aa13.65□□□□□ -0.22
CUTA-207ENST00000479249 POLR1AO95602 1720 aaPredicted RBP13.65□□□□□ -0.22
CUTA-207ENST00000479249 SAMD9Q5K651 1589 aa13.65□□□□□ -0.22
CUTA-207ENST00000479249 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
CUTA-207ENST00000479249 MYO5CQ9NQX4 1742 aa13.64□□□□□ -0.23
CUTA-207ENST00000479249 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CUTA-207ENST00000479249 RNF17Q9BXT8 1623 aaKnown RBP13.62□□□□□ -0.23
CUTA-207ENST00000479249 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
CUTA-207ENST00000479249 ZMYM3Q14202 1370 aa13.59□□□□□ -0.23
CUTA-207ENST00000479249 MLH3Q9UHC1 1453 aa13.59□□□□□ -0.23
CUTA-207ENST00000479249 VWDEQ8N2E2 1590 aa13.58□□□□□ -0.23
CUTA-207ENST00000479249 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.23
CUTA-207ENST00000479249 UPF1Q92900 1129 aaKnown RBP eCLIP13.58□□□□□ -0.24
CUTA-207ENST00000479249 AFAP1Q8N556 730 aa13.57□□□□□ -0.24
CUTA-207ENST00000479249 SYNMO15061 1565 aa13.56□□□□□ -0.24
CUTA-207ENST00000479249 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
CUTA-207ENST00000479249 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
CUTA-207ENST00000479249 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
CUTA-207ENST00000479249 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
CUTA-207ENST00000479249 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
CUTA-207ENST00000479249 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
CUTA-207ENST00000479249 KIDINS220Q9ULH0 1771 aa13.49□□□□□ -0.25
CUTA-207ENST00000479249 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
CUTA-207ENST00000479249 CDK13Q14004 1512 aaKnown RBP13.47□□□□□ -0.25
CUTA-207ENST00000479249 DEPDC5O75140 1603 aa13.46□□□□□ -0.25
CUTA-207ENST00000479249 KIF14Q15058 1648 aa13.46□□□□□ -0.26
CUTA-207ENST00000479249 IQGAP1P46940 1657 aa13.45□□□□□ -0.26
CUTA-207ENST00000479249 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
CUTA-207ENST00000479249 MED14O60244 1454 aa13.45□□□□□ -0.26
CUTA-207ENST00000479249 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
CUTA-207ENST00000479249 ANKLE2Q86XL3 938 aa13.44□□□□□ -0.26
CUTA-207ENST00000479249 ABCC1P33527 1531 aa13.44□□□□□ -0.26
CUTA-207ENST00000479249 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
CUTA-207ENST00000479249 CDC42BPBQ9Y5S2 1711 aa13.41□□□□□ -0.26
CUTA-207ENST00000479249 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
CUTA-207ENST00000479249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■■ 32.9
CUTA-207ENST00000479249 PLXNC1O60486 1568 aa13.39□□□□□ -0.27
CUTA-207ENST00000479249 ROBO1Q9Y6N7 1651 aa13.37□□□□□ -0.27
CUTA-207ENST00000479249 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
CUTA-207ENST00000479249 ZNF772Q68DY9 489 aaPredicted RBP13.37□□□□□ -0.27
CUTA-207ENST00000479249 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
CUTA-207ENST00000479249 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
CUTA-207ENST00000479249 TNRQ92752 1358 aa13.36□□□□□ -0.27
CUTA-207ENST00000479249 FOXD1Q16676 465 aa13.36□□□□□ -0.27
CUTA-207ENST00000479249 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
CUTA-207ENST00000479249 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
CUTA-207ENST00000479249 SAMD9LQ8IVG5 1584 aa13.36□□□□□ -0.27
CUTA-207ENST00000479249 FAM135AQ9P2D6 1515 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms