RNA–Protein interactions for RNA: ENST00000479096.1

HM13-216, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-216ENST00000479096 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
HM13-216ENST00000479096 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
HM13-216ENST00000479096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
HM13-216ENST00000479096 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
HM13-216ENST00000479096 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
HM13-216ENST00000479096 EHBP1L1Q8N3D4 1523 aa17.41■□□□□ 0.38
HM13-216ENST00000479096 POGZQ7Z3K3 1410 aa17.39■□□□□ 0.38
HM13-216ENST00000479096 YEATS2Q9ULM3 1422 aa17.39■□□□□ 0.38
HM13-216ENST00000479096 NUP153P49790 1475 aaKnown RBP17.39■□□□□ 0.37
HM13-216ENST00000479096 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
HM13-216ENST00000479096 ABCA8O94911 1581 aa17.38■□□□□ 0.37
HM13-216ENST00000479096 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
HM13-216ENST00000479096 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
HM13-216ENST00000479096 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
HM13-216ENST00000479096 CCNB3Q8WWL7 1395 aa17.35■□□□□ 0.37
HM13-216ENST00000479096 NEO1Q92859 1461 aa17.35■□□□□ 0.37
HM13-216ENST00000479096 MLECQ14165 292 aa17.34■□□□□ 0.37
HM13-216ENST00000479096 NCOA2Q15596 1464 aa17.31■□□□□ 0.36
HM13-216ENST00000479096 PLEKHD1A6NEE1 506 aa17.31■□□□□ 0.36
HM13-216ENST00000479096 FANCAO15360 1455 aa17.31■□□□□ 0.36
HM13-216ENST00000479096 AKNAQ7Z591 1439 aa17.29■□□□□ 0.36
HM13-216ENST00000479096 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
HM13-216ENST00000479096 ATP10BO94823 1461 aa17.28■□□□□ 0.36
HM13-216ENST00000479096 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
HM13-216ENST00000479096 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
HM13-216ENST00000479096 TROQ12816 1431 aaPredicted RBP17.27■□□□□ 0.35
HM13-216ENST00000479096 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
HM13-216ENST00000479096 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
HM13-216ENST00000479096 DENND4BO75064 1496 aaPredicted RBP17.25■□□□□ 0.35
HM13-216ENST00000479096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
HM13-216ENST00000479096 PTPRTO14522 1441 aa17.24■□□□□ 0.35
HM13-216ENST00000479096 FGD6Q6ZV73 1430 aa17.24■□□□□ 0.35
HM13-216ENST00000479096 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
HM13-216ENST00000479096 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
HM13-216ENST00000479096 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
HM13-216ENST00000479096 ITGAEP38570 1179 aa17.21■□□□□ 0.35
HM13-216ENST00000479096 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.34
HM13-216ENST00000479096 TTC37Q6PGP7 1564 aa17.2■□□□□ 0.34
HM13-216ENST00000479096 HRCP23327 699 aa17.2■□□□□ 0.34
HM13-216ENST00000479096 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
HM13-216ENST00000479096 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
HM13-216ENST00000479096 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
HM13-216ENST00000479096 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
HM13-216ENST00000479096 KIF14Q15058 1648 aa17.18■□□□□ 0.34
HM13-216ENST00000479096 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
HM13-216ENST00000479096 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
HM13-216ENST00000479096 ITSN2Q9NZM3 1697 aa17.16■□□□□ 0.34
HM13-216ENST00000479096 CCER1Q8TC90 406 aaPredicted RBP17.16■□□□□ 0.34
HM13-216ENST00000479096 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
HM13-216ENST00000479096 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
HM13-216ENST00000479096 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
HM13-216ENST00000479096 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
HM13-216ENST00000479096 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
HM13-216ENST00000479096 RICTORQ6R327 1708 aa17.1■□□□□ 0.33
HM13-216ENST00000479096 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
HM13-216ENST00000479096 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
HM13-216ENST00000479096 ARHGEF12Q9NZN5 1544 aa17.1■□□□□ 0.33
HM13-216ENST00000479096 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
HM13-216ENST00000479096 SIGLEC1Q9BZZ2 1709 aa17.09■□□□□ 0.33
HM13-216ENST00000479096 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
HM13-216ENST00000479096 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
HM13-216ENST00000479096 HSPA1LP34931 641 aa17.06■□□□□ 0.32
HM13-216ENST00000479096 ATP10AO60312 1499 aa17.05■□□□□ 0.32
HM13-216ENST00000479096 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
HM13-216ENST00000479096 MED1Q15648 1581 aaPredicted RBP17.05■□□□□ 0.32
HM13-216ENST00000479096 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
HM13-216ENST00000479096 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
HM13-216ENST00000479096 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
HM13-216ENST00000479096 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
HM13-216ENST00000479096 NCOA1Q15788 1441 aa17.02■□□□□ 0.31
HM13-216ENST00000479096 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.31
HM13-216ENST00000479096 MYO5CQ9NQX4 1742 aa17.01■□□□□ 0.31
HM13-216ENST00000479096 CAMSAP2Q08AD1 1489 aa17.01■□□□□ 0.31
HM13-216ENST00000479096 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
HM13-216ENST00000479096 SCAPERQ9BY12 1400 aa17■□□□□ 0.31
HM13-216ENST00000479096 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17■□□□□ 0.31
HM13-216ENST00000479096 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
HM13-216ENST00000479096 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
HM13-216ENST00000479096 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
HM13-216ENST00000479096 ZNF644Q9H582 1327 aaPredicted RBP16.99■□□□□ 0.31
HM13-216ENST00000479096 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
HM13-216ENST00000479096 PIP4K2BP78356 416 aa16.99■□□□□ 0.31
HM13-216ENST00000479096 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
HM13-216ENST00000479096 DAPK1P53355 1430 aa16.97■□□□□ 0.31
HM13-216ENST00000479096 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
HM13-216ENST00000479096 CHIC2Q9UKJ5 165 aa16.97■□□□□ 0.31
HM13-216ENST00000479096 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
HM13-216ENST00000479096 HFM1A2PYH4 1435 aa16.96■□□□□ 0.31
HM13-216ENST00000479096 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.31
HM13-216ENST00000479096 TOM1O60784 492 aa16.96■□□□□ 0.31
HM13-216ENST00000479096 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
HM13-216ENST00000479096 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.3
HM13-216ENST00000479096 ABCC5O15440 1437 aa16.95■□□□□ 0.3
HM13-216ENST00000479096 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
HM13-216ENST00000479096 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
HM13-216ENST00000479096 PLCH2O75038 1416 aa16.94■□□□□ 0.3
HM13-216ENST00000479096 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
HM13-216ENST00000479096 PLEKHH2Q8IVE3 1493 aa16.93■□□□□ 0.3
HM13-216ENST00000479096 ROCK1Q13464 1354 aa16.93■□□□□ 0.3
HM13-216ENST00000479096 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms