RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 FER1L4A9Z1Z3 1794 aa18.39■□□□□ 0.53
PDCD11-204ENST00000478543 AKNAQ7Z591 1439 aa18.39■□□□□ 0.53
PDCD11-204ENST00000478543 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
PDCD11-204ENST00000478543 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
PDCD11-204ENST00000478543 FANCAO15360 1455 aa18.37■□□□□ 0.53
PDCD11-204ENST00000478543 FYCO1Q9BQS8 1478 aa18.37■□□□□ 0.53
PDCD11-204ENST00000478543 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
PDCD11-204ENST00000478543 ZFYVE16Q7Z3T8 1539 aa18.36■□□□□ 0.53
PDCD11-204ENST00000478543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDCD11-204ENST00000478543 MLECQ14165 292 aa18.34■□□□□ 0.53
PDCD11-204ENST00000478543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
PDCD11-204ENST00000478543 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
PDCD11-204ENST00000478543 PREX1Q8TCU6 1659 aa18.33■□□□□ 0.52
PDCD11-204ENST00000478543 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.52
PDCD11-204ENST00000478543 ARHGEF12Q9NZN5 1544 aa18.32■□□□□ 0.52
PDCD11-204ENST00000478543 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
PDCD11-204ENST00000478543 CFAP74Q9C0B2 1584 aa18.31■□□□□ 0.52
PDCD11-204ENST00000478543 LRRIQ1Q96JM4 1722 aa18.31■□□□□ 0.52
PDCD11-204ENST00000478543 APLP2Q06481 763 aa18.29■□□□□ 0.52
PDCD11-204ENST00000478543 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
PDCD11-204ENST00000478543 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
PDCD11-204ENST00000478543 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
PDCD11-204ENST00000478543 TIAM1Q13009 1591 aa18.25■□□□□ 0.51
PDCD11-204ENST00000478543 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
PDCD11-204ENST00000478543 PPARGC1BQ86YN6 1023 aaKnown RBP18.24■□□□□ 0.51
PDCD11-204ENST00000478543 LTBP4Q8N2S1 1624 aa18.22■□□□□ 0.51
PDCD11-204ENST00000478543 SCAPERQ9BY12 1400 aa18.22■□□□□ 0.51
PDCD11-204ENST00000478543 PLEKHD1A6NEE1 506 aa18.21■□□□□ 0.51
PDCD11-204ENST00000478543 MAP3K1Q13233 1512 aa18.2■□□□□ 0.5
PDCD11-204ENST00000478543 ATP10AO60312 1499 aa18.2■□□□□ 0.5
PDCD11-204ENST00000478543 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
PDCD11-204ENST00000478543 KANK4Q5T7N3 995 aaPredicted RBP18.18■□□□□ 0.5
PDCD11-204ENST00000478543 PLCH2O75038 1416 aa18.17■□□□□ 0.5
PDCD11-204ENST00000478543 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
PDCD11-204ENST00000478543 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
PDCD11-204ENST00000478543 C3P01024 1663 aa18.15■□□□□ 0.5
PDCD11-204ENST00000478543 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
PDCD11-204ENST00000478543 PTPRTO14522 1441 aa18.14■□□□□ 0.49
PDCD11-204ENST00000478543 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
PDCD11-204ENST00000478543 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
PDCD11-204ENST00000478543 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
PDCD11-204ENST00000478543 KDM5CP41229 1560 aa18.11■□□□□ 0.49
PDCD11-204ENST00000478543 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
PDCD11-204ENST00000478543 KIF14Q15058 1648 aa18.1■□□□□ 0.49
PDCD11-204ENST00000478543 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
PDCD11-204ENST00000478543 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
PDCD11-204ENST00000478543 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.49
PDCD11-204ENST00000478543 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.49
PDCD11-204ENST00000478543 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
PDCD11-204ENST00000478543 AFAP1Q8N556 730 aa18.06■□□□□ 0.48
PDCD11-204ENST00000478543 IQSEC2Q5JU85 1478 aa18.06■□□□□ 0.48
PDCD11-204ENST00000478543 ZNF518AQ6AHZ1 1483 aa18.06■□□□□ 0.48
PDCD11-204ENST00000478543 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
PDCD11-204ENST00000478543 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
PDCD11-204ENST00000478543 NCOA2Q15596 1464 aa18.02■□□□□ 0.48
PDCD11-204ENST00000478543 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
PDCD11-204ENST00000478543 TRAPPC8Q9Y2L5 1435 aa17.99■□□□□ 0.47
PDCD11-204ENST00000478543 ARHGAP5Q13017 1502 aa17.99■□□□□ 0.47
PDCD11-204ENST00000478543 CAMSAP1Q5T5Y3 1602 aa17.99■□□□□ 0.47
PDCD11-204ENST00000478543 CDC42BPBQ9Y5S2 1711 aa17.99■□□□□ 0.47
PDCD11-204ENST00000478543 AGLP35573 1532 aa17.98■□□□□ 0.47
PDCD11-204ENST00000478543 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
PDCD11-204ENST00000478543 MLH3Q9UHC1 1453 aa17.97■□□□□ 0.47
PDCD11-204ENST00000478543 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
PDCD11-204ENST00000478543 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
PDCD11-204ENST00000478543 NCKAP5LQ9HCH0 1330 aa17.94■□□□□ 0.46
PDCD11-204ENST00000478543 ABCC1P33527 1531 aa17.93■□□□□ 0.46
PDCD11-204ENST00000478543 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
PDCD11-204ENST00000478543 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
PDCD11-204ENST00000478543 MYOM3Q5VTT5 1437 aa17.91■□□□□ 0.46
PDCD11-204ENST00000478543 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
PDCD11-204ENST00000478543 MED1Q15648 1581 aaPredicted RBP17.9■□□□□ 0.46
PDCD11-204ENST00000478543 PREX2Q70Z35 1606 aa17.9■□□□□ 0.46
PDCD11-204ENST00000478543 MROH2AA6NES4 1674 aa17.9■□□□□ 0.46
PDCD11-204ENST00000478543 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.46
PDCD11-204ENST00000478543 GPATCH8Q9UKJ3 1502 aaKnown RBP17.89■□□□□ 0.45
PDCD11-204ENST00000478543 MYO3AQ8NEV4 1616 aa17.88■□□□□ 0.45
PDCD11-204ENST00000478543 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
PDCD11-204ENST00000478543 NPATQ14207 1427 aa17.88■□□□□ 0.45
PDCD11-204ENST00000478543 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
PDCD11-204ENST00000478543 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
PDCD11-204ENST00000478543 TCOF1Q13428 1488 aaKnown RBP17.87■□□□□ 0.45
PDCD11-204ENST00000478543 CLTCQ00610 1675 aaKnown RBP17.84■□□□□ 0.45
PDCD11-204ENST00000478543 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
PDCD11-204ENST00000478543 ZMYM3Q14202 1370 aa17.84■□□□□ 0.45
PDCD11-204ENST00000478543 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
PDCD11-204ENST00000478543 CFDP1Q9UEE9 299 aaPredicted RBP17.84■□□□□ 0.45
PDCD11-204ENST00000478543 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.45
PDCD11-204ENST00000478543 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.45
PDCD11-204ENST00000478543 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.45
PDCD11-204ENST00000478543 PLA2R1Q13018 1463 aa17.83■□□□□ 0.45
PDCD11-204ENST00000478543 HSPA1LP34931 641 aa17.83■□□□□ 0.44
PDCD11-204ENST00000478543 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
PDCD11-204ENST00000478543 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
PDCD11-204ENST00000478543 MIA2Q96PC5 1412 aa17.82■□□□□ 0.44
PDCD11-204ENST00000478543 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
PDCD11-204ENST00000478543 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
PDCD11-204ENST00000478543 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
PDCD11-204ENST00000478543 ZNF644Q9H582 1327 aaPredicted RBP17.79■□□□□ 0.44
PDCD11-204ENST00000478543 CAMSAP2Q08AD1 1489 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms