RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
SH3D19-207ENST00000478503 CCDC18Q5T9S5 1454 aa8.47□□□□□ -1.05
SH3D19-207ENST00000478503 MAP3K1Q13233 1512 aa8.46□□□□□ -1.05
SH3D19-207ENST00000478503 KDM2AQ9Y2K7 1162 aa8.46□□□□□ -1.05
SH3D19-207ENST00000478503 SUPT16HQ9Y5B9 1047 aaKnown RBP8.45□□□□□ -1.06
SH3D19-207ENST00000478503 MYOM3Q5VTT5 1437 aa8.45□□□□□ -1.06
SH3D19-207ENST00000478503 EFCAB5A4FU69 1503 aa8.45□□□□□ -1.06
SH3D19-207ENST00000478503 ANP32CO43423 234 aa8.45□□□□□ -1.06
SH3D19-207ENST00000478503 MAGI3Q5TCQ9 1506 aa8.44□□□□□ -1.06
SH3D19-207ENST00000478503 CUL7Q14999 1698 aa8.44□□□□□ -1.06
SH3D19-207ENST00000478503 NAIPQ13075 1403 aa8.44□□□□□ -1.06
SH3D19-207ENST00000478503 ERCC6Q03468 1493 aa8.44□□□□□ -1.06
SH3D19-207ENST00000478503 MPHOSPH9Q99550 1183 aa8.44□□□□□ -1.06
SH3D19-207ENST00000478503 GRIN2BQ13224 1484 aa8.43□□□□□ -1.06
SH3D19-207ENST00000478503 CFAP43Q8NDM7 1665 aa8.43□□□□□ -1.06
SH3D19-207ENST00000478503 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
SH3D19-207ENST00000478503 L3MBTL2Q969R5 705 aa8.42□□□□□ -1.06
SH3D19-207ENST00000478503 CTTNBP2Q8WZ74 1663 aa8.42□□□□□ -1.06
SH3D19-207ENST00000478503 NBR1Q14596 966 aa8.42□□□□□ -1.06
SH3D19-207ENST00000478503 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
SH3D19-207ENST00000478503 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
SH3D19-207ENST00000478503 IGSF3O75054 1194 aa8.41□□□□□ -1.06
SH3D19-207ENST00000478503 HFM1A2PYH4 1435 aa8.41□□□□□ -1.06
SH3D19-207ENST00000478503 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
SH3D19-207ENST00000478503 ANO8Q9HCE9 1232 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-207ENST00000478503 MRC2Q9UBG0 1479 aa8.4□□□□□ -1.06
SH3D19-207ENST00000478503 EPRSP07814 1512 aaKnown RBP8.4□□□□□ -1.06
SH3D19-207ENST00000478503 TARBP1Q13395 1621 aaKnown RBP8.4□□□□□ -1.07
SH3D19-207ENST00000478503 UACAQ9BZF9 1416 aa8.4□□□□□ -1.07
SH3D19-207ENST00000478503 PRG4Q92954 1404 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-207ENST00000478503 JPH4Q96JJ6 628 aa8.39□□□□□ -1.07
SH3D19-207ENST00000478503 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
SH3D19-207ENST00000478503 LRRIQ1Q96JM4 1722 aa8.39□□□□□ -1.07
SH3D19-207ENST00000478503 THOC2Q8NI27 1593 aaKnown RBP8.39□□□□□ -1.07
SH3D19-207ENST00000478503 ZBTB22O15209 634 aa8.38□□□□□ -1.07
SH3D19-207ENST00000478503 C11orf95C9JLR9 678 aaPredicted RBP8.38□□□□□ -1.07
SH3D19-207ENST00000478503 SAMD9Q5K651 1589 aa8.38□□□□□ -1.07
SH3D19-207ENST00000478503 HNRNPUQ00839 825 aaKnown RBP eCLIP8.38□□□□□ -1.07
SH3D19-207ENST00000478503 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
SH3D19-207ENST00000478503 IQGAP2Q13576 1575 aa8.38□□□□□ -1.07
SH3D19-207ENST00000478503 NBPF8Q3BBV2 869 aa8.37□□□□□ -1.07
SH3D19-207ENST00000478503 PTPN23Q9H3S7 1636 aa8.37□□□□□ -1.07
SH3D19-207ENST00000478503 ADRA2BP18089 450 aa8.37□□□□□ -1.07
SH3D19-207ENST00000478503 PLB1Q6P1J6 1458 aa8.37□□□□□ -1.07
SH3D19-207ENST00000478503 FAM9BQ8IZU0 186 aa8.37□□□□□ -1.07
SH3D19-207ENST00000478503 WASHC2AQ641Q2 1341 aa8.36□□□□□ -1.07
SH3D19-207ENST00000478503 KDM6BO15054 1643 aa8.36□□□□□ -1.07
SH3D19-207ENST00000478503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.36□□□□□ -1.07
SH3D19-207ENST00000478503 EIF4G2P78344 907 aaKnown RBP eCLIP8.36□□□□□ -1.07
SH3D19-207ENST00000478503 ZNF526Q8TF50 670 aaPredicted RBP8.35□□□□□ -1.07
SH3D19-207ENST00000478503 CCDC9Q9Y3X0 531 aaKnown RBP8.35□□□□□ -1.07
SH3D19-207ENST00000478503 EHBP1L1Q8N3D4 1523 aa8.35□□□□□ -1.07
SH3D19-207ENST00000478503 UGGT2Q9NYU1 1516 aa8.35□□□□□ -1.07
SH3D19-207ENST00000478503 HSP90B1P14625 803 aaKnown RBP8.35□□□□□ -1.07
SH3D19-207ENST00000478503 HNRNPMP52272 730 aaKnown RBP eCLIP8.35□□□□□ -1.072e-7■■■□□ 16
SH3D19-207ENST00000478503 SUPT6HQ7KZ85 1726 aaKnown RBP8.35□□□□□ -1.07
SH3D19-207ENST00000478503 PPP6R1Q9UPN7 881 aa8.34□□□□□ -1.07
SH3D19-207ENST00000478503 PLEKHD1A6NEE1 506 aa8.34□□□□□ -1.07
SH3D19-207ENST00000478503 PKD2Q13563 968 aa8.34□□□□□ -1.07
SH3D19-207ENST00000478503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.33□□□□□ -1.08
SH3D19-207ENST00000478503 ADAMTS12P58397 1594 aa8.33□□□□□ -1.08
SH3D19-207ENST00000478503 IFT140Q96RY7 1462 aa8.33□□□□□ -1.08
SH3D19-207ENST00000478503 NUP153P49790 1475 aaKnown RBP8.33□□□□□ -1.08
SH3D19-207ENST00000478503 DISP1Q96F81 1524 aa8.33□□□□□ -1.08
SH3D19-207ENST00000478503 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
SH3D19-207ENST00000478503 NAP1L5Q96NT1 182 aaPredicted RBP8.32□□□□□ -1.08
SH3D19-207ENST00000478503 DENND4BO75064 1496 aaPredicted RBP8.32□□□□□ -1.08
SH3D19-207ENST00000478503 CNKSR2Q8WXI2 1034 aa8.32□□□□□ -1.08
SH3D19-207ENST00000478503 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
SH3D19-207ENST00000478503 PBRM1Q86U86 1689 aa8.32□□□□□ -1.08
SH3D19-207ENST00000478503 ABCC5O15440 1437 aa8.32□□□□□ -1.08
SH3D19-207ENST00000478503 KIAA0586Q9BVV6 1533 aa8.32□□□□□ -1.08
SH3D19-207ENST00000478503 RGL3Q3MIN7 710 aa8.31□□□□□ -1.08
SH3D19-207ENST00000478503 HECW1Q76N89 1606 aa8.31□□□□□ -1.08
SH3D19-207ENST00000478503 DAPK1P53355 1430 aa8.31□□□□□ -1.08
SH3D19-207ENST00000478503 WDR62O43379 1518 aa8.3□□□□□ -1.08
SH3D19-207ENST00000478503 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
SH3D19-207ENST00000478503 CCER2I3L3R5 266 aa8.29□□□□□ -1.08
SH3D19-207ENST00000478503 TSPY4P0CV99 314 aa8.29□□□□□ -1.08
SH3D19-207ENST00000478503 TSPY10P0CW01 314 aa8.29□□□□□ -1.08
SH3D19-207ENST00000478503 TSHZ2Q9NRE2 1034 aa8.29□□□□□ -1.08
SH3D19-207ENST00000478503 EIF4G3O43432 1585 aaKnown RBP8.28□□□□□ -1.08
SH3D19-207ENST00000478503 MIA2Q96PC5 1412 aa8.28□□□□□ -1.08
SH3D19-207ENST00000478503 NUP155O75694 1391 aa8.27□□□□□ -1.08
SH3D19-207ENST00000478503 ANKRD30BQ9BXX2 1392 aa8.27□□□□□ -1.08
SH3D19-207ENST00000478503 ARHGEF11O15085 1522 aa8.27□□□□□ -1.08
SH3D19-207ENST00000478503 FGD1P98174 961 aa8.27□□□□□ -1.09
SH3D19-207ENST00000478503 KIAA0556O60303 1618 aa8.27□□□□□ -1.09
SH3D19-207ENST00000478503 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
SH3D19-207ENST00000478503 DCAF11Q8TEB1 546 aa8.26□□□□□ -1.09
SH3D19-207ENST00000478503 SALL2Q9Y467 1007 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-207ENST00000478503 TCOF1Q13428 1488 aaKnown RBP8.26□□□□□ -1.09
SH3D19-207ENST00000478503 KIF7Q2M1P5 1343 aa8.26□□□□□ -1.09
SH3D19-207ENST00000478503 TROQ12816 1431 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-207ENST00000478503 KDM5BQ9UGL1 1544 aa8.26□□□□□ -1.09
SH3D19-207ENST00000478503 CARMIL2Q6F5E8 1435 aa8.26□□□□□ -1.09
SH3D19-207ENST00000478503 PRKRIP1Q9H875 184 aaPredicted RBP8.25□□□□□ -1.09
SH3D19-207ENST00000478503 USP35Q9P2H5 1018 aa8.25□□□□□ -1.09
SH3D19-207ENST00000478503 GPATCH8Q9UKJ3 1502 aaKnown RBP8.25□□□□□ -1.09
SH3D19-207ENST00000478503 CEP170Q5SW79 1584 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms