RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
U2AF1-210ENST00000478282 MAGI3Q5TCQ9 1506 aa20.74■□□□□ 0.91
U2AF1-210ENST00000478282 MSH5O43196 834 aa20.73■□□□□ 0.91
U2AF1-210ENST00000478282 FGD6Q6ZV73 1430 aa20.73■□□□□ 0.91
U2AF1-210ENST00000478282 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
U2AF1-210ENST00000478282 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
U2AF1-210ENST00000478282 ATP10BO94823 1461 aa20.72■□□□□ 0.91
U2AF1-210ENST00000478282 FANCIQ9NVI1 1328 aa20.7■□□□□ 0.9
U2AF1-210ENST00000478282 HFM1A2PYH4 1435 aa20.7■□□□□ 0.9
U2AF1-210ENST00000478282 PTPN23Q9H3S7 1636 aa20.7■□□□□ 0.9
U2AF1-210ENST00000478282 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
U2AF1-210ENST00000478282 ZCCHC11Q5TAX3 1644 aaKnown RBP20.68■□□□□ 0.9
U2AF1-210ENST00000478282 HNRNPUQ00839 825 aaKnown RBP eCLIP20.67■□□□□ 0.9
U2AF1-210ENST00000478282 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
U2AF1-210ENST00000478282 PTPRKQ15262 1439 aa20.64■□□□□ 0.89
U2AF1-210ENST00000478282 SUPT6HQ7KZ85 1726 aaKnown RBP20.61■□□□□ 0.89
U2AF1-210ENST00000478282 NAIPQ13075 1403 aa20.61■□□□□ 0.89
U2AF1-210ENST00000478282 ERICH6BQ5W0A0 696 aa20.6■□□□□ 0.89
U2AF1-210ENST00000478282 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
U2AF1-210ENST00000478282 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.89
U2AF1-210ENST00000478282 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.88
U2AF1-210ENST00000478282 WASHC2AQ641Q2 1341 aa20.55■□□□□ 0.88
U2AF1-210ENST00000478282 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
U2AF1-210ENST00000478282 NCOA2Q15596 1464 aa20.54■□□□□ 0.88
U2AF1-210ENST00000478282 MYOM3Q5VTT5 1437 aa20.54■□□□□ 0.88
U2AF1-210ENST00000478282 KIF14Q15058 1648 aa20.53■□□□□ 0.88
U2AF1-210ENST00000478282 PPP4R2Q9NY27 417 aa20.52■□□□□ 0.88
U2AF1-210ENST00000478282 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
U2AF1-210ENST00000478282 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.88
U2AF1-210ENST00000478282 CNTLNQ9NXG0 1405 aa20.5■□□□□ 0.87
U2AF1-210ENST00000478282 GCC2Q8IWJ2 1684 aa20.47■□□□□ 0.87
U2AF1-210ENST00000478282 WDR7Q9Y4E6 1490 aa20.46■□□□□ 0.87
U2AF1-210ENST00000478282 CDC42BPAQ5VT25 1732 aa20.45■□□□□ 0.86
U2AF1-210ENST00000478282 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
U2AF1-210ENST00000478282 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.86
U2AF1-210ENST00000478282 PLEKHD1A6NEE1 506 aa20.44■□□□□ 0.86
U2AF1-210ENST00000478282 DENND4BO75064 1496 aaPredicted RBP20.44■□□□□ 0.86
U2AF1-210ENST00000478282 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
U2AF1-210ENST00000478282 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
U2AF1-210ENST00000478282 ASXL2Q76L83 1435 aa20.43■□□□□ 0.86
U2AF1-210ENST00000478282 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
U2AF1-210ENST00000478282 ABCA9Q8IUA7 1624 aa20.42■□□□□ 0.86
U2AF1-210ENST00000478282 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
U2AF1-210ENST00000478282 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
U2AF1-210ENST00000478282 TCOF1Q13428 1488 aaKnown RBP20.41■□□□□ 0.86
U2AF1-210ENST00000478282 GPATCH8Q9UKJ3 1502 aaKnown RBP20.4■□□□□ 0.86
U2AF1-210ENST00000478282 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
U2AF1-210ENST00000478282 MIA2Q96PC5 1412 aa20.4■□□□□ 0.86
U2AF1-210ENST00000478282 NCOA1Q15788 1441 aa20.4■□□□□ 0.86
U2AF1-210ENST00000478282 CYB5RLQ6IPT4 315 aa20.4■□□□□ 0.86
U2AF1-210ENST00000478282 DNAJC5Q9H3Z4 198 aa20.4■□□□□ 0.86
U2AF1-210ENST00000478282 ZBED9Q6R2W3 1325 aa20.39■□□□□ 0.86
U2AF1-210ENST00000478282 CDC42BPBQ9Y5S2 1711 aa20.39■□□□□ 0.85
U2AF1-210ENST00000478282 PRKRIP1Q9H875 184 aaPredicted RBP20.39■□□□□ 0.85
U2AF1-210ENST00000478282 AKNAQ7Z591 1439 aa20.38■□□□□ 0.85
U2AF1-210ENST00000478282 CCDC7Q96M83 1385 aa20.38■□□□□ 0.85
U2AF1-210ENST00000478282 ARAP3Q8WWN8 1544 aa20.38■□□□□ 0.85
U2AF1-210ENST00000478282 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
U2AF1-210ENST00000478282 MYO5CQ9NQX4 1742 aa20.37■□□□□ 0.85
U2AF1-210ENST00000478282 GLI2P10070 1586 aa20.36■□□□□ 0.85
U2AF1-210ENST00000478282 KDM6BO15054 1643 aa20.35■□□□□ 0.85
U2AF1-210ENST00000478282 B4GALNT3Q6L9W6 998 aa20.35■□□□□ 0.85
U2AF1-210ENST00000478282 FAM9BQ8IZU0 186 aa20.35■□□□□ 0.85
U2AF1-210ENST00000478282 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
U2AF1-210ENST00000478282 C11orf95C9JLR9 678 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-210ENST00000478282 POLR1AO95602 1720 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-210ENST00000478282 L3MBTL2Q969R5 705 aa20.32■□□□□ 0.84
U2AF1-210ENST00000478282 CHIC2Q9UKJ5 165 aa20.31■□□□□ 0.84
U2AF1-210ENST00000478282 MAP3K4Q9Y6R4 1608 aa20.3■□□□□ 0.84
U2AF1-210ENST00000478282 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
U2AF1-210ENST00000478282 MPHOSPH9Q99550 1183 aa20.29■□□□□ 0.84
U2AF1-210ENST00000478282 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
U2AF1-210ENST00000478282 PLCH2O75038 1416 aa20.29■□□□□ 0.84
U2AF1-210ENST00000478282 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
U2AF1-210ENST00000478282 DEKP35659 375 aaKnown RBP20.25■□□□□ 0.83
U2AF1-210ENST00000478282 KIF13AQ9H1H9 1805 aa20.24■□□□□ 0.83
U2AF1-210ENST00000478282 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
U2AF1-210ENST00000478282 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
U2AF1-210ENST00000478282 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
U2AF1-210ENST00000478282 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
U2AF1-210ENST00000478282 TEX14Q8IWB6 1497 aa20.24■□□□□ 0.83
U2AF1-210ENST00000478282 SPATA31E1Q6ZUB1 1445 aa20.23■□□□□ 0.83
U2AF1-210ENST00000478282 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
U2AF1-210ENST00000478282 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
U2AF1-210ENST00000478282 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
U2AF1-210ENST00000478282 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
U2AF1-210ENST00000478282 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
U2AF1-210ENST00000478282 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
U2AF1-210ENST00000478282 FOXD1Q16676 465 aa20.2■□□□□ 0.82
U2AF1-210ENST00000478282 PPRC1Q5VV67 1664 aaKnown RBP20.2■□□□□ 0.82
U2AF1-210ENST00000478282 MBD5Q9P267 1494 aa20.19■□□□□ 0.82
U2AF1-210ENST00000478282 KIAA1107Q9UPP5 1409 aa20.18■□□□□ 0.82
U2AF1-210ENST00000478282 CFAP74Q9C0B2 1584 aa20.18■□□□□ 0.82
U2AF1-210ENST00000478282 ABCC1P33527 1531 aa20.18■□□□□ 0.82
U2AF1-210ENST00000478282 ARHGAP5Q13017 1502 aa20.18■□□□□ 0.82
U2AF1-210ENST00000478282 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
U2AF1-210ENST00000478282 RNF123Q5XPI4 1314 aa20.16■□□□□ 0.82
U2AF1-210ENST00000478282 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
U2AF1-210ENST00000478282 PAK3O75914 559 aaPredicted RBP20.15■□□□□ 0.82
U2AF1-210ENST00000478282 NUDCQ9Y266 331 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms