RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 GCC2Q8IWJ2 1684 aa12.74□□□□□ -0.37
CDHR3-211ENST00000478080 KIF14Q15058 1648 aa12.74□□□□□ -0.37
CDHR3-211ENST00000478080 DENND4BO75064 1496 aaPredicted RBP12.74□□□□□ -0.37
CDHR3-211ENST00000478080 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
CDHR3-211ENST00000478080 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
CDHR3-211ENST00000478080 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
CDHR3-211ENST00000478080 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.37
CDHR3-211ENST00000478080 AKNAQ7Z591 1439 aa12.71□□□□□ -0.38
CDHR3-211ENST00000478080 DNMT1P26358 1616 aaKnown RBP12.71□□□□□ -0.38
CDHR3-211ENST00000478080 ATP10BO94823 1461 aa12.7□□□□□ -0.38
CDHR3-211ENST00000478080 ABCA8O94911 1581 aa12.7□□□□□ -0.38
CDHR3-211ENST00000478080 PLEKHD1A6NEE1 506 aa12.7□□□□□ -0.38
CDHR3-211ENST00000478080 CHD1O14646 1710 aa12.69□□□□□ -0.38
CDHR3-211ENST00000478080 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
CDHR3-211ENST00000478080 PTPRGP23470 1445 aa12.68□□□□□ -0.38
CDHR3-211ENST00000478080 ROCK1Q13464 1354 aa12.67□□□□□ -0.38
CDHR3-211ENST00000478080 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
CDHR3-211ENST00000478080 KDM5BQ9UGL1 1544 aa12.67□□□□□ -0.38
CDHR3-211ENST00000478080 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
CDHR3-211ENST00000478080 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
CDHR3-211ENST00000478080 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
CDHR3-211ENST00000478080 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
CDHR3-211ENST00000478080 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
CDHR3-211ENST00000478080 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
CDHR3-211ENST00000478080 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
CDHR3-211ENST00000478080 L3MBTL2Q969R5 705 aa12.61□□□□□ -0.39
CDHR3-211ENST00000478080 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDHR3-211ENST00000478080 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
CDHR3-211ENST00000478080 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.4
CDHR3-211ENST00000478080 PZPP20742 1482 aa12.57□□□□□ -0.4
CDHR3-211ENST00000478080 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
CDHR3-211ENST00000478080 ANKRD30AQ9BXX3 1397 aa12.57□□□□□ -0.4
CDHR3-211ENST00000478080 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
CDHR3-211ENST00000478080 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
CDHR3-211ENST00000478080 HSPA5P11021 654 aaKnown RBP12.56□□□□□ -0.4
CDHR3-211ENST00000478080 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
CDHR3-211ENST00000478080 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
CDHR3-211ENST00000478080 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
CDHR3-211ENST00000478080 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
CDHR3-211ENST00000478080 TSPY4P0CV99 314 aa12.54□□□□□ -0.4
CDHR3-211ENST00000478080 TSPY10P0CW01 314 aa12.54□□□□□ -0.4
CDHR3-211ENST00000478080 PKD2Q13563 968 aa12.54□□□□□ -0.4
CDHR3-211ENST00000478080 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
CDHR3-211ENST00000478080 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
CDHR3-211ENST00000478080 MBD5Q9P267 1494 aa12.52□□□□□ -0.41
CDHR3-211ENST00000478080 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.41
CDHR3-211ENST00000478080 TTC37Q6PGP7 1564 aa12.51□□□□□ -0.41
CDHR3-211ENST00000478080 NUP155O75694 1391 aa12.51□□□□□ -0.41
CDHR3-211ENST00000478080 WASHC2AQ641Q2 1341 aa12.51□□□□□ -0.41
CDHR3-211ENST00000478080 ANP32CO43423 234 aa12.51□□□□□ -0.41
CDHR3-211ENST00000478080 EIF4G2P78344 907 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDHR3-211ENST00000478080 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
CDHR3-211ENST00000478080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDHR3-211ENST00000478080 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
CDHR3-211ENST00000478080 SHANK2Q9UPX8 1470 aa12.49□□□□□ -0.41
CDHR3-211ENST00000478080 KIAA1107Q9UPP5 1409 aa12.49□□□□□ -0.41
CDHR3-211ENST00000478080 C11orf95C9JLR9 678 aaPredicted RBP12.49□□□□□ -0.41
CDHR3-211ENST00000478080 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
CDHR3-211ENST00000478080 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
CDHR3-211ENST00000478080 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
CDHR3-211ENST00000478080 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
CDHR3-211ENST00000478080 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
CDHR3-211ENST00000478080 CCDC141Q6ZP82 1450 aa12.47□□□□□ -0.41
CDHR3-211ENST00000478080 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.41
CDHR3-211ENST00000478080 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
CDHR3-211ENST00000478080 CCER2I3L3R5 266 aa12.43□□□□□ -0.42
CDHR3-211ENST00000478080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDHR3-211ENST00000478080 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
CDHR3-211ENST00000478080 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
CDHR3-211ENST00000478080 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
CDHR3-211ENST00000478080 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
CDHR3-211ENST00000478080 CCDC7Q96M83 1385 aa12.4□□□□□ -0.42
CDHR3-211ENST00000478080 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.42
CDHR3-211ENST00000478080 KDM5DQ9BY66 1539 aa12.39□□□□□ -0.43
CDHR3-211ENST00000478080 UHRF1BP1LA0JNW5 1464 aa12.39□□□□□ -0.43
CDHR3-211ENST00000478080 FAM135AQ9P2D6 1515 aa12.38□□□□□ -0.43
CDHR3-211ENST00000478080 PLCH2O75038 1416 aa12.38□□□□□ -0.43
CDHR3-211ENST00000478080 KIF7Q2M1P5 1343 aa12.38□□□□□ -0.43
CDHR3-211ENST00000478080 PLEKHH2Q8IVE3 1493 aa12.37□□□□□ -0.43
CDHR3-211ENST00000478080 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
CDHR3-211ENST00000478080 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
CDHR3-211ENST00000478080 CNTLNQ9NXG0 1405 aa12.37□□□□□ -0.43
CDHR3-211ENST00000478080 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
CDHR3-211ENST00000478080 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
CDHR3-211ENST00000478080 TRAPPC8Q9Y2L5 1435 aa12.36□□□□□ -0.43
CDHR3-211ENST00000478080 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
CDHR3-211ENST00000478080 MAST1Q9Y2H9 1570 aa12.35□□□□□ -0.43
CDHR3-211ENST00000478080 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
CDHR3-211ENST00000478080 USP47Q96K76 1375 aa12.35□□□□□ -0.43
CDHR3-211ENST00000478080 CNGB1Q14028 1251 aaPredicted RBP12.34□□□□□ -0.43
CDHR3-211ENST00000478080 RGL3Q3MIN7 710 aa12.34□□□□□ -0.43
CDHR3-211ENST00000478080 BCORL1Q5H9F3 1711 aa12.32□□□□□ -0.44
CDHR3-211ENST00000478080 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
CDHR3-211ENST00000478080 ABCC1P33527 1531 aa12.32□□□□□ -0.44
CDHR3-211ENST00000478080 PLXNC1O60486 1568 aa12.32□□□□□ -0.44
CDHR3-211ENST00000478080 PLA2R1Q13018 1463 aa12.32□□□□□ -0.44
CDHR3-211ENST00000478080 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
CDHR3-211ENST00000478080 UNC13BO14795 1591 aa12.31□□□□□ -0.44
CDHR3-211ENST00000478080 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
CDHR3-211ENST00000478080 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms