RNA–Protein interactions for RNA: ENST00000477859.1

ITGB8-203, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 5,573 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-203ENST00000477859 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
ITGB8-203ENST00000477859 GRIN2BQ13224 1484 aa11.43□□□□□ -0.58
ITGB8-203ENST00000477859 RBM19Q9Y4C8 960 aaKnown RBP11.43□□□□□ -0.58
ITGB8-203ENST00000477859 MPHOSPH9Q99550 1183 aa11.42□□□□□ -0.58
ITGB8-203ENST00000477859 WASHC2CQ9Y4E1 1318 aa11.42□□□□□ -0.58
ITGB8-203ENST00000477859 TOPBP1Q92547 1522 aa11.42□□□□□ -0.58
ITGB8-203ENST00000477859 RAB3GAP2Q9H2M9 1393 aa11.42□□□□□ -0.58
ITGB8-203ENST00000477859 CC2D1BQ5T0F9 858 aaKnown RBP11.42□□□□□ -0.58
ITGB8-203ENST00000477859 CDCA8Q53HL2 280 aa11.41□□□□□ -0.58
ITGB8-203ENST00000477859 HDGFP51858 240 aaKnown RBP11.41□□□□□ -0.58
ITGB8-203ENST00000477859 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
ITGB8-203ENST00000477859 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
ITGB8-203ENST00000477859 CUX1P39880 1505 aa11.39□□□□□ -0.59
ITGB8-203ENST00000477859 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
ITGB8-203ENST00000477859 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
ITGB8-203ENST00000477859 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
ITGB8-203ENST00000477859 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
ITGB8-203ENST00000477859 NEUROD2Q15784 382 aa11.38□□□□□ -0.59
ITGB8-203ENST00000477859 PRG4Q92954 1404 aaPredicted RBP11.37□□□□□ -0.59
ITGB8-203ENST00000477859 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
ITGB8-203ENST00000477859 ARXQ96QS3 562 aa11.36□□□□□ -0.59
ITGB8-203ENST00000477859 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
ITGB8-203ENST00000477859 TMF1P82094 1093 aa11.35□□□□□ -0.59
ITGB8-203ENST00000477859 NOP58Q9Y2X3 529 aaKnown RBP11.34□□□□□ -0.59
ITGB8-203ENST00000477859 LAS1LQ9Y4W2 734 aaKnown RBP11.34□□□□□ -0.59
ITGB8-203ENST00000477859 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
ITGB8-203ENST00000477859 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
ITGB8-203ENST00000477859 U2SURPO15042 1029 aaKnown RBP11.33□□□□□ -0.6
ITGB8-203ENST00000477859 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
ITGB8-203ENST00000477859 HSPA5P11021 654 aaKnown RBP11.33□□□□□ -0.6
ITGB8-203ENST00000477859 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
ITGB8-203ENST00000477859 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
ITGB8-203ENST00000477859 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
ITGB8-203ENST00000477859 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
ITGB8-203ENST00000477859 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
ITGB8-203ENST00000477859 EID1Q9Y6B2 187 aa11.3□□□□□ -0.6
ITGB8-203ENST00000477859 LAMC3Q9Y6N6 1575 aa11.3□□□□□ -0.6
ITGB8-203ENST00000477859 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
ITGB8-203ENST00000477859 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
ITGB8-203ENST00000477859 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
ITGB8-203ENST00000477859 KIF21BO75037 1637 aa11.28□□□□□ -0.6
ITGB8-203ENST00000477859 ERICH6BQ5W0A0 696 aa11.27□□□□□ -0.61
ITGB8-203ENST00000477859 MORC1Q86VD1 984 aa11.27□□□□□ -0.61
ITGB8-203ENST00000477859 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
ITGB8-203ENST00000477859 NUDCQ9Y266 331 aa11.27□□□□□ -0.61
ITGB8-203ENST00000477859 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
ITGB8-203ENST00000477859 ARHGAP5Q13017 1502 aa11.25□□□□□ -0.61
ITGB8-203ENST00000477859 HDGFL2Q7Z4V5 671 aaPredicted RBP11.24□□□□□ -0.61
ITGB8-203ENST00000477859 SYNJ2O15056 1496 aa11.23□□□□□ -0.61
ITGB8-203ENST00000477859 AFAP1Q8N556 730 aa11.23□□□□□ -0.61
ITGB8-203ENST00000477859 ARAP1Q96P48 1450 aa11.22□□□□□ -0.61
ITGB8-203ENST00000477859 PPP4R2Q9NY27 417 aa11.22□□□□□ -0.61
ITGB8-203ENST00000477859 CCDC144AA2RUR9 1427 aa11.22□□□□□ -0.61
ITGB8-203ENST00000477859 PHLDB1Q86UU1 1377 aa11.22□□□□□ -0.61
ITGB8-203ENST00000477859 CASKIN1Q8WXD9 1431 aa11.22□□□□□ -0.61
ITGB8-203ENST00000477859 MYH16Q9H6N6 1097 aa11.21□□□□□ -0.61
ITGB8-203ENST00000477859 URB2Q14146 1524 aaKnown RBP11.21□□□□□ -0.62
ITGB8-203ENST00000477859 ERICH3Q5RHP9 1530 aa11.21□□□□□ -0.62
ITGB8-203ENST00000477859 ANP32BQ92688 251 aaKnown RBP11.21□□□□□ -0.62
ITGB8-203ENST00000477859 MYOM3Q5VTT5 1437 aa11.2□□□□□ -0.62
ITGB8-203ENST00000477859 NCOA2Q15596 1464 aa11.2□□□□□ -0.62
ITGB8-203ENST00000477859 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
ITGB8-203ENST00000477859 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
ITGB8-203ENST00000477859 FGD6Q6ZV73 1430 aa11.2□□□□□ -0.62
ITGB8-203ENST00000477859 TIMELESSQ9UNS1 1208 aa11.2□□□□□ -0.62
ITGB8-203ENST00000477859 DDRGK1Q96HY6 314 aa11.19□□□□□ -0.62
ITGB8-203ENST00000477859 KIF15Q9NS87 1388 aa11.19□□□□□ -0.62
ITGB8-203ENST00000477859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.19□□□□□ -0.62
ITGB8-203ENST00000477859 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
ITGB8-203ENST00000477859 ZNF608Q9ULD9 1512 aaPredicted RBP11.18□□□□□ -0.62
ITGB8-203ENST00000477859 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
ITGB8-203ENST00000477859 EIF3AQ14152 1382 aaKnown RBP11.18□□□□□ -0.62
ITGB8-203ENST00000477859 NAP1L5Q96NT1 182 aaPredicted RBP11.17□□□□□ -0.62
ITGB8-203ENST00000477859 ABCA10Q8WWZ4 1543 aa11.17□□□□□ -0.62
ITGB8-203ENST00000477859 NPHP1O15259 732 aa11.17□□□□□ -0.62
ITGB8-203ENST00000477859 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
ITGB8-203ENST00000477859 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
ITGB8-203ENST00000477859 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
ITGB8-203ENST00000477859 HSP90AA1P07900 732 aaKnown RBP11.16□□□□□ -0.62
ITGB8-203ENST00000477859 FYCO1Q9BQS8 1478 aa11.15□□□□□ -0.62
ITGB8-203ENST00000477859 RAPGEF3O95398 923 aa11.15□□□□□ -0.62
ITGB8-203ENST00000477859 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.63
ITGB8-203ENST00000477859 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
ITGB8-203ENST00000477859 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
ITGB8-203ENST00000477859 LTV1Q96GA3 475 aaPredicted RBP11.14□□□□□ -0.63
ITGB8-203ENST00000477859 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
ITGB8-203ENST00000477859 CDK13Q14004 1512 aaKnown RBP11.14□□□□□ -0.63
ITGB8-203ENST00000477859 PHF23Q9BUL5 403 aaPredicted RBP11.14□□□□□ -0.63
ITGB8-203ENST00000477859 PEG3Q9GZU2 1588 aa11.13□□□□□ -0.63
ITGB8-203ENST00000477859 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
ITGB8-203ENST00000477859 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
ITGB8-203ENST00000477859 EFCAB5A4FU69 1503 aa11.13□□□□□ -0.63
ITGB8-203ENST00000477859 ST20-MTHFSA0A0A6YYL1 179 aa11.12□□□□□ -0.63
ITGB8-203ENST00000477859 U2AF1L5P0DN76 240 aaPredicted RBP11.12□□□□□ -0.63
ITGB8-203ENST00000477859 U2AF1Q01081 240 aaKnown RBP eCLIP11.12□□□□□ -0.63
ITGB8-203ENST00000477859 KIAA0586Q9BVV6 1533 aa11.12□□□□□ -0.63
ITGB8-203ENST00000477859 IQGAP2Q13576 1575 aa11.12□□□□□ -0.63
ITGB8-203ENST00000477859 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
ITGB8-203ENST00000477859 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
ITGB8-203ENST00000477859 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms