RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 LMTK3Q96Q04 1460 aa30.72■■■□□ 2.51
PRKCD-204ENST00000477794 YEATS2Q9ULM3 1422 aa30.71■■■□□ 2.51
PRKCD-204ENST00000477794 EHMT2Q96KQ7 1210 aa30.7■■■□□ 2.51
PRKCD-204ENST00000477794 CLIP1P30622 1438 aa30.66■■■□□ 2.5
PRKCD-204ENST00000477794 ARHGAP35Q9NRY4 1499 aa30.64■■■□□ 2.5
PRKCD-204ENST00000477794 MLECQ14165 292 aa30.64■■■□□ 2.5
PRKCD-204ENST00000477794 PLPPR3Q6T4P5 718 aa30.64■■■□□ 2.5
PRKCD-204ENST00000477794 ATP10AO60312 1499 aa30.62■■■□□ 2.49
PRKCD-204ENST00000477794 KIF14Q15058 1648 aa30.62■■■□□ 2.49
PRKCD-204ENST00000477794 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
PRKCD-204ENST00000477794 TROQ12816 1431 aaPredicted RBP30.61■■■□□ 2.49
PRKCD-204ENST00000477794 C9orf84Q5VXU9 1444 aa30.6■■■□□ 2.49
PRKCD-204ENST00000477794 ZNF518AQ6AHZ1 1483 aa30.59■■■□□ 2.49
PRKCD-204ENST00000477794 ARHGAP5Q13017 1502 aa30.56■■■□□ 2.48
PRKCD-204ENST00000477794 HSPA2P54652 639 aa30.55■■■□□ 2.48
PRKCD-204ENST00000477794 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
PRKCD-204ENST00000477794 MYT1LQ9UL68 1186 aa30.55■■■□□ 2.48
PRKCD-204ENST00000477794 FER1L4A9Z1Z3 1794 aa30.54■■■□□ 2.48
PRKCD-204ENST00000477794 ARHGEF12Q9NZN5 1544 aa30.49■■■□□ 2.47
PRKCD-204ENST00000477794 SIGLEC1Q9BZZ2 1709 aa30.49■■■□□ 2.47
PRKCD-204ENST00000477794 CCDC18Q5T9S5 1454 aa30.46■■■□□ 2.47
PRKCD-204ENST00000477794 AFAP1Q8N556 730 aa30.46■■■□□ 2.47
PRKCD-204ENST00000477794 KDM5CP41229 1560 aa30.45■■■□□ 2.46
PRKCD-204ENST00000477794 CASKIN1Q8WXD9 1431 aa30.41■■■□□ 2.46
PRKCD-204ENST00000477794 ESF1Q9H501 851 aaKnown RBP30.39■■■□□ 2.46
PRKCD-204ENST00000477794 MLH3Q9UHC1 1453 aa30.38■■■□□ 2.45
PRKCD-204ENST00000477794 DMRT2Q9Y5R5 561 aa30.37■■■□□ 2.45
PRKCD-204ENST00000477794 REREQ9P2R6 1566 aa30.36■■■□□ 2.45
PRKCD-204ENST00000477794 PREX1Q8TCU6 1659 aa30.36■■■□□ 2.45
PRKCD-204ENST00000477794 UHRF1BP1Q6BDS2 1440 aa30.34■■■□□ 2.45
PRKCD-204ENST00000477794 CEBPAP49715 358 aaPredicted RBP30.34■■■□□ 2.45
PRKCD-204ENST00000477794 CERKQ8TCT0 537 aa30.34■■■□□ 2.45
PRKCD-204ENST00000477794 PREX2Q70Z35 1606 aa30.33■■■□□ 2.45
PRKCD-204ENST00000477794 DIP2CQ9Y2E4 1556 aa30.32■■■□□ 2.45
PRKCD-204ENST00000477794 ABCC1P33527 1531 aa30.3■■■□□ 2.44
PRKCD-204ENST00000477794 FYCO1Q9BQS8 1478 aa30.3■■■□□ 2.44
PRKCD-204ENST00000477794 LRRIQ1Q96JM4 1722 aa30.3■■■□□ 2.44
PRKCD-204ENST00000477794 CDC42BPBQ9Y5S2 1711 aa30.3■■■□□ 2.44
PRKCD-204ENST00000477794 AGLP35573 1532 aa30.27■■■□□ 2.44
PRKCD-204ENST00000477794 TRAPPC8Q9Y2L5 1435 aa30.27■■■□□ 2.44
PRKCD-204ENST00000477794 SETD1BQ9UPS6 1966 aaKnown RBP30.25■■■□□ 2.43
PRKCD-204ENST00000477794 ABCA6Q8N139 1617 aa30.25■■■□□ 2.43
PRKCD-204ENST00000477794 CNTLNQ9NXG0 1405 aa30.23■■■□□ 2.43
PRKCD-204ENST00000477794 ITSN2Q9NZM3 1697 aa30.21■■■□□ 2.43
PRKCD-204ENST00000477794 ZNF777Q9ULD5 760 aaPredicted RBP30.21■■■□□ 2.43
PRKCD-204ENST00000477794 SPAG9O60271 1321 aaKnown RBP30.16■■■□□ 2.42
PRKCD-204ENST00000477794 CDC42BPAQ5VT25 1732 aa30.15■■■□□ 2.42
PRKCD-204ENST00000477794 PLEKHH2Q8IVE3 1493 aa30.14■■■□□ 2.42
PRKCD-204ENST00000477794 C3P01024 1663 aa30.12■■■□□ 2.41
PRKCD-204ENST00000477794 KIDINS220Q9ULH0 1771 aa30.12■■■□□ 2.41
PRKCD-204ENST00000477794 CFDP1Q9UEE9 299 aaPredicted RBP30.11■■■□□ 2.41
PRKCD-204ENST00000477794 GPATCH8Q9UKJ3 1502 aaKnown RBP30.11■■■□□ 2.41
PRKCD-204ENST00000477794 SAMD9LQ8IVG5 1584 aa30.11■■■□□ 2.41
PRKCD-204ENST00000477794 CCNB3Q8WWL7 1395 aa30.1■■■□□ 2.41
PRKCD-204ENST00000477794 PTPRTO14522 1441 aa30.1■■■□□ 2.41
PRKCD-204ENST00000477794 KIAA1107Q9UPP5 1409 aa30.09■■■□□ 2.41
PRKCD-204ENST00000477794 SYCP2Q9BX26 1530 aa30.08■■■□□ 2.41
PRKCD-204ENST00000477794 STRCQ7RTU9 1775 aa30.08■■■□□ 2.41
PRKCD-204ENST00000477794 MTUS2Q5JR59 1369 aa30.07■■■□□ 2.4
PRKCD-204ENST00000477794 NPATQ14207 1427 aa30.06■■■□□ 2.4
PRKCD-204ENST00000477794 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.4
PRKCD-204ENST00000477794 ATP7AQ04656 1500 aa30.01■■■□□ 2.4
PRKCD-204ENST00000477794 MROH2AA6NES4 1674 aa30■■■□□ 2.39
PRKCD-204ENST00000477794 ZMYM3Q14202 1370 aa30■■■□□ 2.39
PRKCD-204ENST00000477794 NCOA1Q15788 1441 aa29.97■■■□□ 2.39
PRKCD-204ENST00000477794 A2MP01023 1474 aa29.97■■■□□ 2.39
PRKCD-204ENST00000477794 PPP6R1Q9UPN7 881 aa29.96■■■□□ 2.39
PRKCD-204ENST00000477794 INO80Q9ULG1 1556 aaPredicted RBP29.94■■■□□ 2.38
PRKCD-204ENST00000477794 SUPT6HQ7KZ85 1726 aaKnown RBP29.93■■■□□ 2.38
PRKCD-204ENST00000477794 PLXNC1O60486 1568 aa29.91■■■□□ 2.38
PRKCD-204ENST00000477794 GGT6Q6P531 493 aa29.91■■■□□ 2.38
PRKCD-204ENST00000477794 IQSEC2Q5JU85 1478 aa29.89■■■□□ 2.38
PRKCD-204ENST00000477794 EHBP1L1Q8N3D4 1523 aa29.88■■■□□ 2.37
PRKCD-204ENST00000477794 CAMSAP1Q5T5Y3 1602 aa29.88■■■□□ 2.37
PRKCD-204ENST00000477794 PKD2Q13563 968 aa29.84■■■□□ 2.37
PRKCD-204ENST00000477794 CLTCQ00610 1675 aaKnown RBP29.84■■■□□ 2.37
PRKCD-204ENST00000477794 ADGBQ8N7X0 1667 aa29.84■■■□□ 2.37
PRKCD-204ENST00000477794 RTEL1-TNFRSF6BF6WH68 1400 aa29.83■■■□□ 2.37
PRKCD-204ENST00000477794 CEP162Q5TB80 1403 aa29.83■■■□□ 2.37
PRKCD-204ENST00000477794 DISP3Q9P2K9 1392 aa29.82■■■□□ 2.36
PRKCD-204ENST00000477794 LTBP4Q8N2S1 1624 aa29.82■■■□□ 2.36
PRKCD-204ENST00000477794 TIAM1Q13009 1591 aa29.81■■■□□ 2.36
PRKCD-204ENST00000477794 PLA2R1Q13018 1463 aa29.81■■■□□ 2.36
PRKCD-204ENST00000477794 PTPRKQ15262 1439 aa29.81■■■□□ 2.36
PRKCD-204ENST00000477794 ZNF644Q9H582 1327 aaPredicted RBP29.8■■■□□ 2.36
PRKCD-204ENST00000477794 NCKAP5LQ9HCH0 1330 aa29.78■■■□□ 2.36
PRKCD-204ENST00000477794 RSPH4AQ5TD94 716 aa29.78■■■□□ 2.36
PRKCD-204ENST00000477794 MBD5Q9P267 1494 aa29.78■■■□□ 2.36
PRKCD-204ENST00000477794 MYO3AQ8NEV4 1616 aa29.78■■■□□ 2.36
PRKCD-204ENST00000477794 ZNF142P52746 1687 aaPredicted RBP29.77■■■□□ 2.36
PRKCD-204ENST00000477794 CEP170BQ9Y4F5 1589 aaPredicted RBP29.77■■■□□ 2.36
PRKCD-204ENST00000477794 DHX29Q7Z478 1369 aaKnown RBP29.77■■■□□ 2.36
PRKCD-204ENST00000477794 CCDC141Q6ZP82 1450 aa29.72■■■□□ 2.35
PRKCD-204ENST00000477794 TCOF1Q13428 1488 aaKnown RBP29.7■■■□□ 2.35
PRKCD-204ENST00000477794 FAM135AQ9P2D6 1515 aa29.7■■■□□ 2.34
PRKCD-204ENST00000477794 ZNF335Q9H4Z2 1342 aaPredicted RBP29.7■■■□□ 2.34
PRKCD-204ENST00000477794 KIF3BO15066 747 aa29.69■■■□□ 2.34
PRKCD-204ENST00000477794 A2ML1A8K2U0 1454 aa29.68■■■□□ 2.34
PRKCD-204ENST00000477794 NCOA2Q15596 1464 aa29.68■■■□□ 2.34
PRKCD-204ENST00000477794 UBAP1LF5GYI3 381 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms