RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CERKQ8TCT0 537 aa34.2■■■■□ 3.07
PDLIM1-202ENST00000477757 SCAPERQ9BY12 1400 aa34.19■■■■□ 3.06
PDLIM1-202ENST00000477757 PLCH2O75038 1416 aa34.18■■■■□ 3.06
PDLIM1-202ENST00000477757 PREX1Q8TCU6 1659 aa34.15■■■■□ 3.06
PDLIM1-202ENST00000477757 MLECQ14165 292 aa34.15■■■■□ 3.06
PDLIM1-202ENST00000477757 C9orf84Q5VXU9 1444 aa34.13■■■■□ 3.05
PDLIM1-202ENST00000477757 ATP10AO60312 1499 aa34.13■■■■□ 3.05
PDLIM1-202ENST00000477757 MYO5CQ9NQX4 1742 aa34.09■■■■□ 3.05
PDLIM1-202ENST00000477757 ZNF518AQ6AHZ1 1483 aa34.01■■■■□ 3.04
PDLIM1-202ENST00000477757 KDM5CP41229 1560 aa34■■■■□ 3.03
PDLIM1-202ENST00000477757 EFCAB2Q5VUJ9 269 aa33.99■■■■□ 3.03
PDLIM1-202ENST00000477757 STRCQ7RTU9 1775 aa33.98■■■■□ 3.03
PDLIM1-202ENST00000477757 KIF14Q15058 1648 aa33.97■■■■□ 3.03
PDLIM1-202ENST00000477757 FMN1Q68DA7 1419 aa33.96■■■■□ 3.03
PDLIM1-202ENST00000477757 CEBPAP49715 358 aaPredicted RBP33.94■■■■□ 3.02
PDLIM1-202ENST00000477757 UHRF1BP1Q6BDS2 1440 aa33.94■■■■□ 3.02
PDLIM1-202ENST00000477757 REREQ9P2R6 1566 aa33.93■■■■□ 3.02
PDLIM1-202ENST00000477757 DIP2CQ9Y2E4 1556 aa33.92■■■■□ 3.02
PDLIM1-202ENST00000477757 ARHGAP5Q13017 1502 aa33.91■■■■□ 3.02
PDLIM1-202ENST00000477757 DMRT2Q9Y5R5 561 aa33.9■■■■□ 3.02
PDLIM1-202ENST00000477757 TROQ12816 1431 aaPredicted RBP33.88■■■■□ 3.01
PDLIM1-202ENST00000477757 CDK11AQ9UQ88 783 aaPredicted RBP33.87■■■■□ 3.01
PDLIM1-202ENST00000477757 ARHGAP35Q9NRY4 1499 aa33.85■■■■□ 3.01
PDLIM1-202ENST00000477757 ABCA6Q8N139 1617 aa33.84■■■■□ 3.01
PDLIM1-202ENST00000477757 DISP3Q9P2K9 1392 aa33.84■■■■□ 3.01
PDLIM1-202ENST00000477757 SETD1BQ9UPS6 1966 aaKnown RBP33.83■■■■□ 3.01
PDLIM1-202ENST00000477757 AFAP1Q8N556 730 aa33.83■■■■□ 3.01
PDLIM1-202ENST00000477757 CLIP1P30622 1438 aa33.82■■■■□ 3
PDLIM1-202ENST00000477757 ATP1B4Q9UN42 357 aaPredicted RBP33.82■■■■□ 3
PDLIM1-202ENST00000477757 C3P01024 1663 aa33.81■■■■□ 3
PDLIM1-202ENST00000477757 MLH3Q9UHC1 1453 aa33.81■■■■□ 3
PDLIM1-202ENST00000477757 PTPRTO14522 1441 aa33.8■■■■□ 3
PDLIM1-202ENST00000477757 AGLP35573 1532 aa33.79■■■■□ 3
PDLIM1-202ENST00000477757 LRRIQ1Q96JM4 1722 aa33.76■■■■□ 3
PDLIM1-202ENST00000477757 ILDR2Q71H61 639 aa33.76■■■□□ 2.99
PDLIM1-202ENST00000477757 CDC42BPBQ9Y5S2 1711 aa33.76■■■□□ 2.99
PDLIM1-202ENST00000477757 ABCC1P33527 1531 aa33.74■■■□□ 2.99
PDLIM1-202ENST00000477757 PREX2Q70Z35 1606 aa33.74■■■□□ 2.99
PDLIM1-202ENST00000477757 SPATA31D1Q6ZQQ2 1576 aa33.72■■■□□ 2.99
PDLIM1-202ENST00000477757 MYT1LQ9UL68 1186 aa33.71■■■□□ 2.99
PDLIM1-202ENST00000477757 SOCS7O14512 581 aa33.7■■■□□ 2.99
PDLIM1-202ENST00000477757 ITSN2Q9NZM3 1697 aa33.7■■■□□ 2.99
PDLIM1-202ENST00000477757 LTBP4Q8N2S1 1624 aa33.69■■■□□ 2.98
PDLIM1-202ENST00000477757 UBTFP17480 764 aaKnown RBP33.69■■■□□ 2.98
PDLIM1-202ENST00000477757 TRAPPC8Q9Y2L5 1435 aa33.69■■■□□ 2.98
PDLIM1-202ENST00000477757 IQSEC2Q5JU85 1478 aa33.67■■■□□ 2.98
PDLIM1-202ENST00000477757 NCOA1Q15788 1441 aa33.65■■■□□ 2.98
PDLIM1-202ENST00000477757 CNTLNQ9NXG0 1405 aa33.65■■■□□ 2.98
PDLIM1-202ENST00000477757 KIDINS220Q9ULH0 1771 aa33.63■■■□□ 2.97
PDLIM1-202ENST00000477757 ESF1Q9H501 851 aaKnown RBP33.62■■■□□ 2.97
PDLIM1-202ENST00000477757 EHMT2Q96KQ7 1210 aa33.61■■■□□ 2.97
PDLIM1-202ENST00000477757 CCDC18Q5T9S5 1454 aa33.58■■■□□ 2.97
PDLIM1-202ENST00000477757 MROH2AA6NES4 1674 aa33.58■■■□□ 2.97
PDLIM1-202ENST00000477757 NPATQ14207 1427 aa33.55■■■□□ 2.96
PDLIM1-202ENST00000477757 CDC42BPAQ5VT25 1732 aa33.54■■■□□ 2.96
PDLIM1-202ENST00000477757 CASKIN1Q8WXD9 1431 aa33.53■■■□□ 2.96
PDLIM1-202ENST00000477757 SAMD9LQ8IVG5 1584 aa33.52■■■□□ 2.96
PDLIM1-202ENST00000477757 CAMSAP1Q5T5Y3 1602 aa33.52■■■□□ 2.96
PDLIM1-202ENST00000477757 ZNF142P52746 1687 aaPredicted RBP33.44■■■□□ 2.94
PDLIM1-202ENST00000477757 SYCP2Q9BX26 1530 aa33.43■■■□□ 2.94
PDLIM1-202ENST00000477757 ZMYM3Q14202 1370 aa33.41■■■□□ 2.94
PDLIM1-202ENST00000477757 MYO3AQ8NEV4 1616 aa33.41■■■□□ 2.94
PDLIM1-202ENST00000477757 PLXNC1O60486 1568 aa33.4■■■□□ 2.94
PDLIM1-202ENST00000477757 FYCO1Q9BQS8 1478 aa33.39■■■□□ 2.94
PDLIM1-202ENST00000477757 PLA2R1Q13018 1463 aa33.38■■■□□ 2.93
PDLIM1-202ENST00000477757 SUPT6HQ7KZ85 1726 aaKnown RBP33.38■■■□□ 2.93
PDLIM1-202ENST00000477757 ATP7AQ04656 1500 aa33.38■■■□□ 2.93
PDLIM1-202ENST00000477757 INO80Q9ULG1 1556 aaPredicted RBP33.37■■■□□ 2.93
PDLIM1-202ENST00000477757 CLTCQ00610 1675 aaKnown RBP33.36■■■□□ 2.93
PDLIM1-202ENST00000477757 SPAG9O60271 1321 aaKnown RBP33.35■■■□□ 2.93
PDLIM1-202ENST00000477757 CEP170BQ9Y4F5 1589 aaPredicted RBP33.34■■■□□ 2.93
PDLIM1-202ENST00000477757 GPATCH8Q9UKJ3 1502 aaKnown RBP33.34■■■□□ 2.93
PDLIM1-202ENST00000477757 ZNF335Q9H4Z2 1342 aaPredicted RBP33.33■■■□□ 2.93
PDLIM1-202ENST00000477757 TCOF1Q13428 1488 aaKnown RBP33.33■■■□□ 2.93
PDLIM1-202ENST00000477757 NCKAP5LQ9HCH0 1330 aa33.32■■■□□ 2.93
PDLIM1-202ENST00000477757 ZNF777Q9ULD5 760 aaPredicted RBP33.31■■■□□ 2.92
PDLIM1-202ENST00000477757 PTPRKQ15262 1439 aa33.3■■■□□ 2.92
PDLIM1-202ENST00000477757 KIAA1107Q9UPP5 1409 aa33.3■■■□□ 2.92
PDLIM1-202ENST00000477757 A2MP01023 1474 aa33.3■■■□□ 2.92
PDLIM1-202ENST00000477757 PKD2Q13563 968 aa33.29■■■□□ 2.92
PDLIM1-202ENST00000477757 PLEKHH2Q8IVE3 1493 aa33.29■■■□□ 2.92
PDLIM1-202ENST00000477757 UBAP1LF5GYI3 381 aa33.26■■■□□ 2.91
PDLIM1-202ENST00000477757 HNRNPMP52272 730 aaKnown RBP eCLIP33.25■■■□□ 2.911e-6■■■■□ 23
PDLIM1-202ENST00000477757 ADGBQ8N7X0 1667 aa33.2■■■□□ 2.9
PDLIM1-202ENST00000477757 CHIC1Q5VXU3 224 aa33.17■■■□□ 2.9
PDLIM1-202ENST00000477757 CFDP1Q9UEE9 299 aaPredicted RBP33.16■■■□□ 2.9
PDLIM1-202ENST00000477757 A2ML1A8K2U0 1454 aa33.15■■■□□ 2.9
PDLIM1-202ENST00000477757 CCNB3Q8WWL7 1395 aa33.14■■■□□ 2.9
PDLIM1-202ENST00000477757 GGT6Q6P531 493 aa33.14■■■□□ 2.9
PDLIM1-202ENST00000477757 PPP6R1Q9UPN7 881 aa33.14■■■□□ 2.9
PDLIM1-202ENST00000477757 DNMT1P26358 1616 aaKnown RBP33.13■■■□□ 2.89
PDLIM1-202ENST00000477757 POLR1AO95602 1720 aaPredicted RBP33.08■■■□□ 2.89
PDLIM1-202ENST00000477757 NEURL4Q96JN8 1562 aa33.06■■■□□ 2.88
PDLIM1-202ENST00000477757 TIAM1Q13009 1591 aa33.05■■■□□ 2.88
PDLIM1-202ENST00000477757 CPS1P31327 1500 aa33.05■■■□□ 2.88
PDLIM1-202ENST00000477757 MTUS2Q5JR59 1369 aa33.04■■■□□ 2.88
PDLIM1-202ENST00000477757 MBD5Q9P267 1494 aa33.04■■■□□ 2.88
PDLIM1-202ENST00000477757 MED1Q15648 1581 aaPredicted RBP33.03■■■□□ 2.88
PDLIM1-202ENST00000477757 RTEL1-TNFRSF6BF6WH68 1400 aa33.02■■■□□ 2.88
PDLIM1-202ENST00000477757 FAM135AQ9P2D6 1515 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms