RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 ZNF644Q9H582 1327 aaPredicted RBP22.61■■□□□ 1.21
LINC00996-201ENST00000477392 CAMSAP2Q08AD1 1489 aa22.61■■□□□ 1.21
LINC00996-201ENST00000477392 GPATCH8Q9UKJ3 1502 aaKnown RBP22.6■■□□□ 1.21
LINC00996-201ENST00000477392 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
LINC00996-201ENST00000477392 ATP10BO94823 1461 aa22.58■■□□□ 1.2
LINC00996-201ENST00000477392 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
LINC00996-201ENST00000477392 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
LINC00996-201ENST00000477392 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
LINC00996-201ENST00000477392 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
LINC00996-201ENST00000477392 CDC42BPAQ5VT25 1732 aa22.56■■□□□ 1.2
LINC00996-201ENST00000477392 ADGBQ8N7X0 1667 aa22.56■■□□□ 1.2
LINC00996-201ENST00000477392 ABCC10Q5T3U5 1492 aa22.54■■□□□ 1.2
LINC00996-201ENST00000477392 YTHDC1Q96MU7 727 aaKnown RBP22.53■■□□□ 1.2
LINC00996-201ENST00000477392 CFDP1Q9UEE9 299 aaPredicted RBP22.51■■□□□ 1.19
LINC00996-201ENST00000477392 TRIM52Q96A61 297 aa22.5■■□□□ 1.19
LINC00996-201ENST00000477392 PTPRGP23470 1445 aa22.49■■□□□ 1.19
LINC00996-201ENST00000477392 ADGRL2O95490 1459 aa22.48■■□□□ 1.19
LINC00996-201ENST00000477392 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
LINC00996-201ENST00000477392 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
LINC00996-201ENST00000477392 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
LINC00996-201ENST00000477392 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
LINC00996-201ENST00000477392 ZNF777Q9ULD5 760 aaPredicted RBP22.4■■□□□ 1.18
LINC00996-201ENST00000477392 SHANK2Q9UPX8 1470 aa22.39■■□□□ 1.17
LINC00996-201ENST00000477392 PZPP20742 1482 aa22.38■■□□□ 1.17
LINC00996-201ENST00000477392 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
LINC00996-201ENST00000477392 PREX2Q70Z35 1606 aa22.37■■□□□ 1.17
LINC00996-201ENST00000477392 ANKRD30BQ9BXX2 1392 aa22.37■■□□□ 1.17
LINC00996-201ENST00000477392 CLASP1Q7Z460 1538 aa22.37■■□□□ 1.17
LINC00996-201ENST00000477392 CDC42BPBQ9Y5S2 1711 aa22.36■■□□□ 1.17
LINC00996-201ENST00000477392 FOXD1Q16676 465 aa22.35■■□□□ 1.17
LINC00996-201ENST00000477392 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
LINC00996-201ENST00000477392 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
LINC00996-201ENST00000477392 ABCC2Q92887 1545 aa22.34■■□□□ 1.17
LINC00996-201ENST00000477392 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
LINC00996-201ENST00000477392 RPRD2Q5VT52 1461 aaKnown RBP22.34■■□□□ 1.17
LINC00996-201ENST00000477392 DDX10Q13206 875 aaKnown RBP22.33■■□□□ 1.16
LINC00996-201ENST00000477392 C9orf84Q5VXU9 1444 aa22.32■■□□□ 1.16
LINC00996-201ENST00000477392 SAMD9LQ8IVG5 1584 aa22.32■■□□□ 1.16
LINC00996-201ENST00000477392 TEX14Q8IWB6 1497 aa22.31■■□□□ 1.16
LINC00996-201ENST00000477392 TTC37Q6PGP7 1564 aa22.3■■□□□ 1.16
LINC00996-201ENST00000477392 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
LINC00996-201ENST00000477392 MBD5Q9P267 1494 aa22.29■■□□□ 1.16
LINC00996-201ENST00000477392 ANKRD50Q9ULJ7 1429 aa22.28■■□□□ 1.16
LINC00996-201ENST00000477392 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
LINC00996-201ENST00000477392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.26■■□□□ 1.15
LINC00996-201ENST00000477392 KDM5DQ9BY66 1539 aa22.23■■□□□ 1.15
LINC00996-201ENST00000477392 KIAA1107Q9UPP5 1409 aa22.23■■□□□ 1.15
LINC00996-201ENST00000477392 CCDC141Q6ZP82 1450 aa22.23■■□□□ 1.15
LINC00996-201ENST00000477392 MYO5CQ9NQX4 1742 aa22.22■■□□□ 1.15
LINC00996-201ENST00000477392 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
LINC00996-201ENST00000477392 HNRNPMP52272 730 aaKnown RBP eCLIP22.2■■□□□ 1.14
LINC00996-201ENST00000477392 UHRF1BP1LA0JNW5 1464 aa22.19■■□□□ 1.14
LINC00996-201ENST00000477392 SYCP2Q9BX26 1530 aa22.19■■□□□ 1.14
LINC00996-201ENST00000477392 ARHGAP5Q13017 1502 aa22.18■■□□□ 1.14
LINC00996-201ENST00000477392 KCNH8Q96L42 1107 aa22.18■■□□□ 1.14
LINC00996-201ENST00000477392 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
LINC00996-201ENST00000477392 MAST1Q9Y2H9 1570 aa22.17■■□□□ 1.14
LINC00996-201ENST00000477392 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
LINC00996-201ENST00000477392 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
LINC00996-201ENST00000477392 HSPA5P11021 654 aaKnown RBP22.17■■□□□ 1.14
LINC00996-201ENST00000477392 PKD2Q13563 968 aa22.14■■□□□ 1.13
LINC00996-201ENST00000477392 NBPF8Q3BBV2 869 aa22.14■■□□□ 1.13
LINC00996-201ENST00000477392 NUP155O75694 1391 aa22.12■■□□□ 1.13
LINC00996-201ENST00000477392 EIF4G2P78344 907 aaKnown RBP eCLIP22.11■■□□□ 1.13
LINC00996-201ENST00000477392 RSPH4AQ5TD94 716 aa22.1■■□□□ 1.13
LINC00996-201ENST00000477392 PLXNC1O60486 1568 aa22.1■■□□□ 1.13
LINC00996-201ENST00000477392 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
LINC00996-201ENST00000477392 WASHC2AQ641Q2 1341 aa22.09■■□□□ 1.13
LINC00996-201ENST00000477392 CCER2I3L3R5 266 aa22.07■■□□□ 1.12
LINC00996-201ENST00000477392 ANP32CO43423 234 aa22.07■■□□□ 1.12
LINC00996-201ENST00000477392 UNC13BO14795 1591 aa22.06■■□□□ 1.12
LINC00996-201ENST00000477392 POLR1AO95602 1720 aaPredicted RBP22.06■■□□□ 1.12
LINC00996-201ENST00000477392 ARHGEF12Q9NZN5 1544 aa22.06■■□□□ 1.12
LINC00996-201ENST00000477392 SPATA31E1Q6ZUB1 1445 aa22.06■■□□□ 1.12
LINC00996-201ENST00000477392 FAM135AQ9P2D6 1515 aa22.05■■□□□ 1.12
LINC00996-201ENST00000477392 PLCH2O75038 1416 aa22.05■■□□□ 1.12
LINC00996-201ENST00000477392 ABCC1P33527 1531 aa22.03■■□□□ 1.12
LINC00996-201ENST00000477392 CCDC7Q96M83 1385 aa21.99■■□□□ 1.11
LINC00996-201ENST00000477392 CNTLNQ9NXG0 1405 aa21.98■■□□□ 1.11
LINC00996-201ENST00000477392 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
LINC00996-201ENST00000477392 UHRF1BP1Q6BDS2 1440 aa21.98■■□□□ 1.11
LINC00996-201ENST00000477392 IQGAP3Q86VI3 1631 aa21.97■■□□□ 1.11
LINC00996-201ENST00000477392 ARAP3Q8WWN8 1544 aa21.97■■□□□ 1.11
LINC00996-201ENST00000477392 DUOX2Q9NRD8 1548 aa21.97■■□□□ 1.11
LINC00996-201ENST00000477392 KDM5CP41229 1560 aa21.95■■□□□ 1.1
LINC00996-201ENST00000477392 MAGI2Q86UL8 1455 aa21.94■■□□□ 1.1
LINC00996-201ENST00000477392 RALGAPBQ86X10 1494 aa21.94■■□□□ 1.1
LINC00996-201ENST00000477392 EFCAB2Q5VUJ9 269 aa21.93■■□□□ 1.1
LINC00996-201ENST00000477392 WDR7Q9Y4E6 1490 aa21.93■■□□□ 1.1
LINC00996-201ENST00000477392 ERBINQ96RT1 1412 aa21.92■■□□□ 1.1
LINC00996-201ENST00000477392 TRAPPC8Q9Y2L5 1435 aa21.92■■□□□ 1.1
LINC00996-201ENST00000477392 BCORL1Q5H9F3 1711 aa21.91■■□□□ 1.1
LINC00996-201ENST00000477392 ABCA9Q8IUA7 1624 aa21.89■■□□□ 1.1
LINC00996-201ENST00000477392 KIF7Q2M1P5 1343 aa21.89■■□□□ 1.09
LINC00996-201ENST00000477392 USP47Q96K76 1375 aa21.89■■□□□ 1.09
LINC00996-201ENST00000477392 PLA2R1Q13018 1463 aa21.88■■□□□ 1.09
LINC00996-201ENST00000477392 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
LINC00996-201ENST00000477392 ZFYVE16Q7Z3T8 1539 aa21.87■■□□□ 1.09
LINC00996-201ENST00000477392 CCDC144AA2RUR9 1427 aa21.84■■□□□ 1.09
LINC00996-201ENST00000477392 RTEL1-TNFRSF6BF6WH68 1400 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms