RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 ROCK1Q13464 1354 aa33.86■■■■□ 3.01
CCDC7-206ENST00000476558 CHIC2Q9UKJ5 165 aa33.83■■■■□ 3.01
CCDC7-206ENST00000476558 KDM5BQ9UGL1 1544 aa33.81■■■■□ 3
CCDC7-206ENST00000476558 RRP7BPQ9NSQ0 103 aa33.81■■■■□ 3
CCDC7-206ENST00000476558 ZCCHC11Q5TAX3 1644 aaKnown RBP33.77■■■■□ 3
CCDC7-206ENST00000476558 OSCARQ8IYS5 282 aa33.76■■■□□ 2.99
CCDC7-206ENST00000476558 CROCC2H7BZ55 1655 aa33.74■■■□□ 2.99
CCDC7-206ENST00000476558 KDM6BO15054 1643 aa33.73■■■□□ 2.99
CCDC7-206ENST00000476558 PREX2Q70Z35 1606 aa33.72■■■□□ 2.99
CCDC7-206ENST00000476558 CDC42BPBQ9Y5S2 1711 aa33.7■■■□□ 2.99
CCDC7-206ENST00000476558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.69■■■□□ 2.98
CCDC7-206ENST00000476558 ZNF777Q9ULD5 760 aaPredicted RBP33.69■■■□□ 2.98
CCDC7-206ENST00000476558 ADGRL2O95490 1459 aa33.68■■■□□ 2.98
CCDC7-206ENST00000476558 ADGBQ8N7X0 1667 aa33.67■■■□□ 2.98
CCDC7-206ENST00000476558 TTC37Q6PGP7 1564 aa33.67■■■□□ 2.98
CCDC7-206ENST00000476558 NCOA1Q15788 1441 aa33.64■■■□□ 2.98
CCDC7-206ENST00000476558 ZNF316A6NFI3 1004 aaPredicted RBP33.64■■■□□ 2.98
CCDC7-206ENST00000476558 ACIN1Q9UKV3 1341 aaKnown RBP33.63■■■□□ 2.97
CCDC7-206ENST00000476558 ARHGEF5Q12774 1597 aa33.62■■■□□ 2.97
CCDC7-206ENST00000476558 SHANK2Q9UPX8 1470 aa33.61■■■□□ 2.97
CCDC7-206ENST00000476558 SAMD9LQ8IVG5 1584 aa33.6■■■□□ 2.97
CCDC7-206ENST00000476558 SIN3AQ96ST3 1273 aa33.6■■■□□ 2.97
CCDC7-206ENST00000476558 MBD5Q9P267 1494 aa33.59■■■□□ 2.97
CCDC7-206ENST00000476558 TIMELESSQ9UNS1 1208 aa33.58■■■□□ 2.97
CCDC7-206ENST00000476558 DENND4BO75064 1496 aaPredicted RBP33.57■■■□□ 2.96
CCDC7-206ENST00000476558 MYO5CQ9NQX4 1742 aa33.56■■■□□ 2.96
CCDC7-206ENST00000476558 ANKRD30AQ9BXX3 1397 aa33.52■■■□□ 2.96
CCDC7-206ENST00000476558 C9orf84Q5VXU9 1444 aa33.5■■■□□ 2.95
CCDC7-206ENST00000476558 ARHGAP5Q13017 1502 aa33.5■■■□□ 2.95
CCDC7-206ENST00000476558 KCNH8Q96L42 1107 aa33.49■■■□□ 2.95
CCDC7-206ENST00000476558 HNRNPMP52272 730 aaKnown RBP eCLIP33.48■■■□□ 2.952e-6■■■■■ 31.6
CCDC7-206ENST00000476558 PLCH2O75038 1416 aa33.47■■■□□ 2.95
CCDC7-206ENST00000476558 NEUROD1Q13562 356 aa33.47■■■□□ 2.95
CCDC7-206ENST00000476558 RSPH4AQ5TD94 716 aa33.47■■■□□ 2.95
CCDC7-206ENST00000476558 TRIM52Q96A61 297 aa33.47■■■□□ 2.95
CCDC7-206ENST00000476558 CCDC141Q6ZP82 1450 aa33.46■■■□□ 2.95
CCDC7-206ENST00000476558 MPHOSPH9Q99550 1183 aa33.45■■■□□ 2.95
CCDC7-206ENST00000476558 KIAA1107Q9UPP5 1409 aa33.44■■■□□ 2.94
CCDC7-206ENST00000476558 WDR7Q9Y4E6 1490 aa33.44■■■□□ 2.94
CCDC7-206ENST00000476558 TSPY4P0CV99 314 aa33.42■■■□□ 2.94
CCDC7-206ENST00000476558 TSPY10P0CW01 314 aa33.42■■■□□ 2.94
CCDC7-206ENST00000476558 PLEKHH2Q8IVE3 1493 aa33.42■■■□□ 2.94
CCDC7-206ENST00000476558 SYCP2Q9BX26 1530 aa33.4■■■□□ 2.94
CCDC7-206ENST00000476558 ARAP3Q8WWN8 1544 aa33.39■■■□□ 2.94
CCDC7-206ENST00000476558 DIEXFQ68CQ4 756 aaKnown RBP33.39■■■□□ 2.94
CCDC7-206ENST00000476558 MAST1Q9Y2H9 1570 aa33.38■■■□□ 2.93
CCDC7-206ENST00000476558 ANKRD50Q9ULJ7 1429 aa33.37■■■□□ 2.93
CCDC7-206ENST00000476558 PZPP20742 1482 aa33.34■■■□□ 2.93
CCDC7-206ENST00000476558 PPP1R15AO75807 674 aaPredicted RBP33.32■■■□□ 2.93
CCDC7-206ENST00000476558 EFCAB2Q5VUJ9 269 aa33.32■■■□□ 2.93
CCDC7-206ENST00000476558 ARHGEF12Q9NZN5 1544 aa33.32■■■□□ 2.92
CCDC7-206ENST00000476558 ABCA9Q8IUA7 1624 aa33.32■■■□□ 2.92
CCDC7-206ENST00000476558 ASXL2Q76L83 1435 aa33.31■■■□□ 2.92
CCDC7-206ENST00000476558 KIF15Q9NS87 1388 aa33.3■■■□□ 2.92
CCDC7-206ENST00000476558 ABCC1P33527 1531 aa33.28■■■□□ 2.92
CCDC7-206ENST00000476558 TONSLQ96HA7 1378 aa33.27■■■□□ 2.92
CCDC7-206ENST00000476558 ANKRD30BQ9BXX2 1392 aa33.27■■■□□ 2.92
CCDC7-206ENST00000476558 SLC4A1APQ9BWU0 796 aaKnown RBP33.24■■■□□ 2.91
CCDC7-206ENST00000476558 PLXNC1O60486 1568 aa33.23■■■□□ 2.91
CCDC7-206ENST00000476558 KDM5DQ9BY66 1539 aa33.22■■■□□ 2.91
CCDC7-206ENST00000476558 FOXD1Q16676 465 aa33.19■■■□□ 2.9
CCDC7-206ENST00000476558 NPM1P06748 294 aaKnown RBP eCLIP33.18■■■□□ 2.9
CCDC7-206ENST00000476558 TRAPPC8Q9Y2L5 1435 aa33.15■■■□□ 2.9
CCDC7-206ENST00000476558 RPRD2Q5VT52 1461 aaKnown RBP33.14■■■□□ 2.9
CCDC7-206ENST00000476558 FANCAO15360 1455 aa33.12■■■□□ 2.89
CCDC7-206ENST00000476558 NUP155O75694 1391 aa33.11■■■□□ 2.89
CCDC7-206ENST00000476558 DUOX2Q9NRD8 1548 aa33.08■■■□□ 2.89
CCDC7-206ENST00000476558 RTEL1-TNFRSF6BF6WH68 1400 aa33.06■■■□□ 2.88
CCDC7-206ENST00000476558 UNC13BO14795 1591 aa33.06■■■□□ 2.88
CCDC7-206ENST00000476558 PKD2Q13563 968 aa33.05■■■□□ 2.88
CCDC7-206ENST00000476558 ERBINQ96RT1 1412 aa33.01■■■□□ 2.88
CCDC7-206ENST00000476558 TEX14Q8IWB6 1497 aa33■■■□□ 2.87
CCDC7-206ENST00000476558 ZFYVE16Q7Z3T8 1539 aa33■■■□□ 2.87
CCDC7-206ENST00000476558 RIMBP3CA6NJZ7 1639 aa32.99■■■□□ 2.87
CCDC7-206ENST00000476558 RIMBP3BA6NNM3 1639 aa32.99■■■□□ 2.87
CCDC7-206ENST00000476558 RIMBP3Q9UFD9 1639 aa32.99■■■□□ 2.87
CCDC7-206ENST00000476558 FAM135AQ9P2D6 1515 aa32.98■■■□□ 2.87
CCDC7-206ENST00000476558 AFAP1Q8N556 730 aa32.98■■■□□ 2.87
CCDC7-206ENST00000476558 L3MBTL2Q969R5 705 aa32.98■■■□□ 2.87
CCDC7-206ENST00000476558 ADGRL1O94910 1474 aa32.98■■■□□ 2.87
CCDC7-206ENST00000476558 SPAG9O60271 1321 aaKnown RBP32.97■■■□□ 2.87
CCDC7-206ENST00000476558 INO80Q9ULG1 1556 aaPredicted RBP32.95■■■□□ 2.87
CCDC7-206ENST00000476558 MAGI2Q86UL8 1455 aa32.95■■■□□ 2.87
CCDC7-206ENST00000476558 SCAPERQ9BY12 1400 aa32.95■■■□□ 2.87
CCDC7-206ENST00000476558 CD109Q6YHK3 1445 aa32.93■■■□□ 2.86
CCDC7-206ENST00000476558 IQGAP3Q86VI3 1631 aa32.92■■■□□ 2.86
CCDC7-206ENST00000476558 CFAP74Q9C0B2 1584 aa32.9■■■□□ 2.86
CCDC7-206ENST00000476558 ATP7AQ04656 1500 aa32.89■■■□□ 2.86
CCDC7-206ENST00000476558 CYB5RLQ6IPT4 315 aa32.88■■■□□ 2.85
CCDC7-206ENST00000476558 MIER1Q8N108 512 aa32.84■■■□□ 2.85
CCDC7-206ENST00000476558 ZNF518AQ6AHZ1 1483 aa32.8■■■□□ 2.84
CCDC7-206ENST00000476558 DEPDC5O75140 1603 aa32.77■■■□□ 2.84
CCDC7-206ENST00000476558 KIDINS220Q9ULH0 1771 aa32.77■■■□□ 2.84
CCDC7-206ENST00000476558 NBPF8Q3BBV2 869 aa32.77■■■□□ 2.84
CCDC7-206ENST00000476558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.76■■■□□ 2.83
CCDC7-206ENST00000476558 GLI2P10070 1586 aa32.76■■■□□ 2.83
CCDC7-206ENST00000476558 KDM5CP41229 1560 aa32.76■■■□□ 2.83
CCDC7-206ENST00000476558 NEO1Q92859 1461 aa32.76■■■□□ 2.83
CCDC7-206ENST00000476558 MAP3K4Q9Y6R4 1608 aa32.75■■■□□ 2.83
CCDC7-206ENST00000476558 PLA2R1Q13018 1463 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms