RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 NAIPQ13075 1403 aa30.19■■■□□ 2.42
ITGA4-207ENST00000476089 AKNAQ7Z591 1439 aa30.18■■■□□ 2.42
ITGA4-207ENST00000476089 ABCC5O15440 1437 aa30.16■■■□□ 2.42
ITGA4-207ENST00000476089 RRP7BPQ9NSQ0 103 aa30.14■■■□□ 2.42
ITGA4-207ENST00000476089 KCNH8Q96L42 1107 aa30.13■■■□□ 2.41
ITGA4-207ENST00000476089 ROCK1Q13464 1354 aa30.12■■■□□ 2.41
ITGA4-207ENST00000476089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.41
ITGA4-207ENST00000476089 PREX2Q70Z35 1606 aa30.12■■■□□ 2.41
ITGA4-207ENST00000476089 GCC2Q8IWJ2 1684 aa30.12■■■□□ 2.41
ITGA4-207ENST00000476089 TTC37Q6PGP7 1564 aa30.09■■■□□ 2.41
ITGA4-207ENST00000476089 CDC42BPBQ9Y5S2 1711 aa30.07■■■□□ 2.4
ITGA4-207ENST00000476089 MYO5CQ9NQX4 1742 aa30.05■■■□□ 2.4
ITGA4-207ENST00000476089 NPM1P06748 294 aaKnown RBP eCLIP30.04■■■□□ 2.4
ITGA4-207ENST00000476089 ARHGAP5Q13017 1502 aa30.03■■■□□ 2.4
ITGA4-207ENST00000476089 CROCC2H7BZ55 1655 aa30.03■■■□□ 2.4
ITGA4-207ENST00000476089 WDR7Q9Y4E6 1490 aa30.02■■■□□ 2.4
ITGA4-207ENST00000476089 ACIN1Q9UKV3 1341 aaKnown RBP30■■■□□ 2.39
ITGA4-207ENST00000476089 MAPKBP1O60336 1514 aa30■■■□□ 2.39
ITGA4-207ENST00000476089 ADGBQ8N7X0 1667 aa30■■■□□ 2.39
ITGA4-207ENST00000476089 SAMD9LQ8IVG5 1584 aa29.98■■■□□ 2.39
ITGA4-207ENST00000476089 TSPY4P0CV99 314 aa29.96■■■□□ 2.39
ITGA4-207ENST00000476089 TSPY10P0CW01 314 aa29.96■■■□□ 2.39
ITGA4-207ENST00000476089 RSPH4AQ5TD94 716 aa29.96■■■□□ 2.39
ITGA4-207ENST00000476089 ARHGEF5Q12774 1597 aa29.96■■■□□ 2.39
ITGA4-207ENST00000476089 SHANK2Q9UPX8 1470 aa29.96■■■□□ 2.39
ITGA4-207ENST00000476089 PLCH2O75038 1416 aa29.95■■■□□ 2.39
ITGA4-207ENST00000476089 ADGRL2O95490 1459 aa29.95■■■□□ 2.39
ITGA4-207ENST00000476089 ANKRD30AQ9BXX3 1397 aa29.95■■■□□ 2.38
ITGA4-207ENST00000476089 HNRNPMP52272 730 aaKnown RBP eCLIP29.94■■■□□ 2.38
ITGA4-207ENST00000476089 NCOA1Q15788 1441 aa29.94■■■□□ 2.38
ITGA4-207ENST00000476089 PLEKHH2Q8IVE3 1493 aa29.94■■■□□ 2.38
ITGA4-207ENST00000476089 ASXL2Q76L83 1435 aa29.93■■■□□ 2.38
ITGA4-207ENST00000476089 MBD5Q9P267 1494 aa29.91■■■□□ 2.38
ITGA4-207ENST00000476089 EFCAB2Q5VUJ9 269 aa29.91■■■□□ 2.38
ITGA4-207ENST00000476089 TRIM52Q96A61 297 aa29.91■■■□□ 2.38
ITGA4-207ENST00000476089 CCDC141Q6ZP82 1450 aa29.91■■■□□ 2.38
ITGA4-207ENST00000476089 C9orf84Q5VXU9 1444 aa29.9■■■□□ 2.38
ITGA4-207ENST00000476089 KDM6BO15054 1643 aa29.9■■■□□ 2.38
ITGA4-207ENST00000476089 KIAA1107Q9UPP5 1409 aa29.87■■■□□ 2.37
ITGA4-207ENST00000476089 SYCP2Q9BX26 1530 aa29.87■■■□□ 2.37
ITGA4-207ENST00000476089 ARAP3Q8WWN8 1544 aa29.86■■■□□ 2.37
ITGA4-207ENST00000476089 ABCA9Q8IUA7 1624 aa29.84■■■□□ 2.37
ITGA4-207ENST00000476089 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
ITGA4-207ENST00000476089 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
ITGA4-207ENST00000476089 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
ITGA4-207ENST00000476089 NEUROD1Q13562 356 aa29.77■■■□□ 2.36
ITGA4-207ENST00000476089 CYB5RLQ6IPT4 315 aa29.77■■■□□ 2.36
ITGA4-207ENST00000476089 ANKRD50Q9ULJ7 1429 aa29.77■■■□□ 2.36
ITGA4-207ENST00000476089 SIN3AQ96ST3 1273 aa29.76■■■□□ 2.35
ITGA4-207ENST00000476089 MAST1Q9Y2H9 1570 aa29.75■■■□□ 2.35
ITGA4-207ENST00000476089 ABCC1P33527 1531 aa29.75■■■□□ 2.35
ITGA4-207ENST00000476089 MPHOSPH9Q99550 1183 aa29.75■■■□□ 2.35
ITGA4-207ENST00000476089 KIF15Q9NS87 1388 aa29.74■■■□□ 2.35
ITGA4-207ENST00000476089 TIMELESSQ9UNS1 1208 aa29.74■■■□□ 2.35
ITGA4-207ENST00000476089 ARHGEF12Q9NZN5 1544 aa29.71■■■□□ 2.35
ITGA4-207ENST00000476089 FANCAO15360 1455 aa29.71■■■□□ 2.35
ITGA4-207ENST00000476089 SLC4A1APQ9BWU0 796 aaKnown RBP29.66■■■□□ 2.34
ITGA4-207ENST00000476089 DENND4BO75064 1496 aaPredicted RBP29.65■■■□□ 2.34
ITGA4-207ENST00000476089 PLXNC1O60486 1568 aa29.64■■■□□ 2.33
ITGA4-207ENST00000476089 TRAPPC8Q9Y2L5 1435 aa29.62■■■□□ 2.33
ITGA4-207ENST00000476089 ZNF316A6NFI3 1004 aaPredicted RBP29.62■■■□□ 2.33
ITGA4-207ENST00000476089 CD109Q6YHK3 1445 aa29.62■■■□□ 2.33
ITGA4-207ENST00000476089 TONSLQ96HA7 1378 aa29.59■■■□□ 2.33
ITGA4-207ENST00000476089 ADGRL1O94910 1474 aa29.59■■■□□ 2.33
ITGA4-207ENST00000476089 PZPP20742 1482 aa29.58■■■□□ 2.33
ITGA4-207ENST00000476089 SPAG9O60271 1321 aaKnown RBP29.57■■■□□ 2.32
ITGA4-207ENST00000476089 CFAP74Q9C0B2 1584 aa29.56■■■□□ 2.32
ITGA4-207ENST00000476089 RTEL1-TNFRSF6BF6WH68 1400 aa29.55■■■□□ 2.32
ITGA4-207ENST00000476089 SCAPERQ9BY12 1400 aa29.55■■■□□ 2.32
ITGA4-207ENST00000476089 NUP155O75694 1391 aa29.55■■■□□ 2.32
ITGA4-207ENST00000476089 DUOX2Q9NRD8 1548 aa29.55■■■□□ 2.32
ITGA4-207ENST00000476089 AFAP1Q8N556 730 aa29.55■■■□□ 2.32
ITGA4-207ENST00000476089 FOXD1Q16676 465 aa29.53■■■□□ 2.32
ITGA4-207ENST00000476089 KDM5DQ9BY66 1539 aa29.51■■■□□ 2.32
ITGA4-207ENST00000476089 ANKRD30BQ9BXX2 1392 aa29.5■■■□□ 2.31
ITGA4-207ENST00000476089 ERBINQ96RT1 1412 aa29.49■■■□□ 2.31
ITGA4-207ENST00000476089 PPP1R15AO75807 674 aaPredicted RBP29.48■■■□□ 2.31
ITGA4-207ENST00000476089 ZFYVE16Q7Z3T8 1539 aa29.47■■■□□ 2.31
ITGA4-207ENST00000476089 PKD2Q13563 968 aa29.47■■■□□ 2.31
ITGA4-207ENST00000476089 MYT1LQ9UL68 1186 aa29.45■■■□□ 2.3
ITGA4-207ENST00000476089 ATP7AQ04656 1500 aa29.44■■■□□ 2.3
ITGA4-207ENST00000476089 GLI2P10070 1586 aa29.43■■■□□ 2.3
ITGA4-207ENST00000476089 INO80Q9ULG1 1556 aaPredicted RBP29.43■■■□□ 2.3
ITGA4-207ENST00000476089 ZNF518AQ6AHZ1 1483 aa29.42■■■□□ 2.3
ITGA4-207ENST00000476089 UNC13BO14795 1591 aa29.42■■■□□ 2.3
ITGA4-207ENST00000476089 NEO1Q92859 1461 aa29.41■■■□□ 2.3
ITGA4-207ENST00000476089 MAP3K4Q9Y6R4 1608 aa29.4■■■□□ 2.3
ITGA4-207ENST00000476089 FAM135AQ9P2D6 1515 aa29.39■■■□□ 2.29
ITGA4-207ENST00000476089 RPRD2Q5VT52 1461 aaKnown RBP29.39■■■□□ 2.29
ITGA4-207ENST00000476089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.37■■■□□ 2.29
ITGA4-207ENST00000476089 DIEXFQ68CQ4 756 aaKnown RBP29.36■■■□□ 2.29
ITGA4-207ENST00000476089 POGZQ7Z3K3 1410 aa29.35■■■□□ 2.29
ITGA4-207ENST00000476089 FAM69CQ0P6D2 419 aa29.34■■■□□ 2.29
ITGA4-207ENST00000476089 DIP2BQ9P265 1576 aa29.32■■■□□ 2.28
ITGA4-207ENST00000476089 IQGAP3Q86VI3 1631 aa29.32■■■□□ 2.28
ITGA4-207ENST00000476089 MAGI2Q86UL8 1455 aa29.31■■■□□ 2.28
ITGA4-207ENST00000476089 KDM5CP41229 1560 aa29.3■■■□□ 2.28
ITGA4-207ENST00000476089 KIDINS220Q9ULH0 1771 aa29.29■■■□□ 2.28
ITGA4-207ENST00000476089 DHX29Q7Z478 1369 aaKnown RBP29.28■■■□□ 2.28
ITGA4-207ENST00000476089 L3MBTL2Q969R5 705 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms