RNA–Protein interactions for RNA: ENST00000475892.5

SUPT20H-212, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best) BASIC

Gene SUPT20H, Length 2,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-212ENST00000475892 ABCC5O15440 1437 aa22.45■■□□□ 1.18
SUPT20H-212ENST00000475892 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
SUPT20H-212ENST00000475892 PREX2Q70Z35 1606 aa22.44■■□□□ 1.18
SUPT20H-212ENST00000475892 ADGRL2O95490 1459 aa22.44■■□□□ 1.18
SUPT20H-212ENST00000475892 TIMELESSQ9UNS1 1208 aa22.44■■□□□ 1.18
SUPT20H-212ENST00000475892 KDM5BQ9UGL1 1544 aa22.43■■□□□ 1.18
SUPT20H-212ENST00000475892 SHANK2Q9UPX8 1470 aa22.43■■□□□ 1.18
SUPT20H-212ENST00000475892 ARHGEF5Q12774 1597 aa22.41■■□□□ 1.18
SUPT20H-212ENST00000475892 ZCCHC11Q5TAX3 1644 aaKnown RBP22.4■■□□□ 1.18
SUPT20H-212ENST00000475892 CFDP1Q9UEE9 299 aaPredicted RBP22.39■■□□□ 1.17
SUPT20H-212ENST00000475892 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
SUPT20H-212ENST00000475892 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.16
SUPT20H-212ENST00000475892 MYO5CQ9NQX4 1742 aa22.33■■□□□ 1.16
SUPT20H-212ENST00000475892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.32■■□□□ 1.16
SUPT20H-212ENST00000475892 ARAP3Q8WWN8 1544 aa22.3■■□□□ 1.16
SUPT20H-212ENST00000475892 PLEKHH2Q8IVE3 1493 aa22.3■■□□□ 1.16
SUPT20H-212ENST00000475892 TTC37Q6PGP7 1564 aa22.29■■□□□ 1.16
SUPT20H-212ENST00000475892 RSPH4AQ5TD94 716 aa22.29■■□□□ 1.16
SUPT20H-212ENST00000475892 SAMD9LQ8IVG5 1584 aa22.28■■□□□ 1.16
SUPT20H-212ENST00000475892 MAST1Q9Y2H9 1570 aa22.28■■□□□ 1.16
SUPT20H-212ENST00000475892 NCOA1Q15788 1441 aa22.28■■□□□ 1.16
SUPT20H-212ENST00000475892 KDM6BO15054 1643 aa22.28■■□□□ 1.16
SUPT20H-212ENST00000475892 ZNF644Q9H582 1327 aaPredicted RBP22.27■■□□□ 1.16
SUPT20H-212ENST00000475892 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
SUPT20H-212ENST00000475892 MBD5Q9P267 1494 aa22.25■■□□□ 1.15
SUPT20H-212ENST00000475892 KIAA1107Q9UPP5 1409 aa22.25■■□□□ 1.15
SUPT20H-212ENST00000475892 OSCARQ8IYS5 282 aa22.24■■□□□ 1.15
SUPT20H-212ENST00000475892 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
SUPT20H-212ENST00000475892 CCDC141Q6ZP82 1450 aa22.23■■□□□ 1.15
SUPT20H-212ENST00000475892 CHIC2Q9UKJ5 165 aa22.22■■□□□ 1.15
SUPT20H-212ENST00000475892 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
SUPT20H-212ENST00000475892 PLCH2O75038 1416 aa22.2■■□□□ 1.14
SUPT20H-212ENST00000475892 ARHGAP5Q13017 1502 aa22.2■■□□□ 1.14
SUPT20H-212ENST00000475892 DENND4BO75064 1496 aaPredicted RBP22.19■■□□□ 1.14
SUPT20H-212ENST00000475892 KDM5DQ9BY66 1539 aa22.18■■□□□ 1.14
SUPT20H-212ENST00000475892 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
SUPT20H-212ENST00000475892 PLXNC1O60486 1568 aa22.16■■□□□ 1.14
SUPT20H-212ENST00000475892 ABCA9Q8IUA7 1624 aa22.15■■□□□ 1.14
SUPT20H-212ENST00000475892 ZNF777Q9ULD5 760 aaPredicted RBP22.14■■□□□ 1.13
SUPT20H-212ENST00000475892 DIEXFQ68CQ4 756 aaKnown RBP22.12■■□□□ 1.13
SUPT20H-212ENST00000475892 SYCP2Q9BX26 1530 aa22.12■■□□□ 1.13
SUPT20H-212ENST00000475892 TSPY4P0CV99 314 aa22.12■■□□□ 1.13
SUPT20H-212ENST00000475892 TSPY10P0CW01 314 aa22.12■■□□□ 1.13
SUPT20H-212ENST00000475892 ANKRD50Q9ULJ7 1429 aa22.12■■□□□ 1.13
SUPT20H-212ENST00000475892 ABCC1P33527 1531 aa22.12■■□□□ 1.13
SUPT20H-212ENST00000475892 MPHOSPH9Q99550 1183 aa22.11■■□□□ 1.13
SUPT20H-212ENST00000475892 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
SUPT20H-212ENST00000475892 PZPP20742 1482 aa22.09■■□□□ 1.13
SUPT20H-212ENST00000475892 TONSLQ96HA7 1378 aa22.08■■□□□ 1.13
SUPT20H-212ENST00000475892 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
SUPT20H-212ENST00000475892 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
SUPT20H-212ENST00000475892 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
SUPT20H-212ENST00000475892 ANKRD30BQ9BXX2 1392 aa22.04■■□□□ 1.12
SUPT20H-212ENST00000475892 KIF15Q9NS87 1388 aa22.04■■□□□ 1.12
SUPT20H-212ENST00000475892 UNC13BO14795 1591 aa22.03■■□□□ 1.12
SUPT20H-212ENST00000475892 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
SUPT20H-212ENST00000475892 RPRD2Q5VT52 1461 aaKnown RBP22.02■■□□□ 1.12
SUPT20H-212ENST00000475892 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.12
SUPT20H-212ENST00000475892 DUOX2Q9NRD8 1548 aa22.01■■□□□ 1.11
SUPT20H-212ENST00000475892 RTEL1-TNFRSF6BF6WH68 1400 aa22.01■■□□□ 1.11
SUPT20H-212ENST00000475892 ASXL2Q76L83 1435 aa22.01■■□□□ 1.11
SUPT20H-212ENST00000475892 ARHGEF12Q9NZN5 1544 aa22■■□□□ 1.11
SUPT20H-212ENST00000475892 CFAP74Q9C0B2 1584 aa22■■□□□ 1.11
SUPT20H-212ENST00000475892 ERBINQ96RT1 1412 aa21.98■■□□□ 1.11
SUPT20H-212ENST00000475892 KCNH8Q96L42 1107 aa21.96■■□□□ 1.11
SUPT20H-212ENST00000475892 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
SUPT20H-212ENST00000475892 MAGI2Q86UL8 1455 aa21.95■■□□□ 1.1
SUPT20H-212ENST00000475892 IQGAP3Q86VI3 1631 aa21.93■■□□□ 1.1
SUPT20H-212ENST00000475892 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
SUPT20H-212ENST00000475892 FANCAO15360 1455 aa21.92■■□□□ 1.1
SUPT20H-212ENST00000475892 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
SUPT20H-212ENST00000475892 TEX14Q8IWB6 1497 aa21.91■■□□□ 1.1
SUPT20H-212ENST00000475892 ZFYVE16Q7Z3T8 1539 aa21.91■■□□□ 1.1
SUPT20H-212ENST00000475892 FAM135AQ9P2D6 1515 aa21.89■■□□□ 1.09
SUPT20H-212ENST00000475892 NUP155O75694 1391 aa21.88■■□□□ 1.09
SUPT20H-212ENST00000475892 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
SUPT20H-212ENST00000475892 EIF2AK4Q9P2K8 1649 aaKnown RBP21.86■■□□□ 1.09
SUPT20H-212ENST00000475892 DEPDC5O75140 1603 aa21.84■■□□□ 1.09
SUPT20H-212ENST00000475892 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
SUPT20H-212ENST00000475892 ATP7AQ04656 1500 aa21.83■■□□□ 1.09
SUPT20H-212ENST00000475892 GLI2P10070 1586 aa21.82■■□□□ 1.08
SUPT20H-212ENST00000475892 PKD2Q13563 968 aa21.81■■□□□ 1.08
SUPT20H-212ENST00000475892 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
SUPT20H-212ENST00000475892 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
SUPT20H-212ENST00000475892 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
SUPT20H-212ENST00000475892 ATP10AO60312 1499 aa21.8■■□□□ 1.08
SUPT20H-212ENST00000475892 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
SUPT20H-212ENST00000475892 NEO1Q92859 1461 aa21.79■■□□□ 1.08
SUPT20H-212ENST00000475892 KDM5CP41229 1560 aa21.78■■□□□ 1.08
SUPT20H-212ENST00000475892 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
SUPT20H-212ENST00000475892 CD109Q6YHK3 1445 aa21.77■■□□□ 1.08
SUPT20H-212ENST00000475892 SCAPERQ9BY12 1400 aa21.77■■□□□ 1.07
SUPT20H-212ENST00000475892 FOXD1Q16676 465 aa21.76■■□□□ 1.07
SUPT20H-212ENST00000475892 L3MBTL2Q969R5 705 aa21.76■■□□□ 1.07
SUPT20H-212ENST00000475892 MAP3K4Q9Y6R4 1608 aa21.75■■□□□ 1.07
SUPT20H-212ENST00000475892 UHRF1BP1Q6BDS2 1440 aa21.75■■□□□ 1.07
SUPT20H-212ENST00000475892 VWDEQ8N2E2 1590 aa21.74■■□□□ 1.07
SUPT20H-212ENST00000475892 BCORL1Q5H9F3 1711 aa21.72■■□□□ 1.07
SUPT20H-212ENST00000475892 KIDINS220Q9ULH0 1771 aa21.72■■□□□ 1.07
SUPT20H-212ENST00000475892 MLH3Q9UHC1 1453 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms