RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 KDM5BQ9UGL1 1544 aa20.1■□□□□ 0.81
UBXN11-214ENST00000475591 FOXD1Q16676 465 aa20.1■□□□□ 0.81
UBXN11-214ENST00000475591 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
UBXN11-214ENST00000475591 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
UBXN11-214ENST00000475591 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
UBXN11-214ENST00000475591 DNMT1P26358 1616 aaKnown RBP20.08■□□□□ 0.81
UBXN11-214ENST00000475591 MPHOSPH9Q99550 1183 aa20.08■□□□□ 0.8
UBXN11-214ENST00000475591 KIF14Q15058 1648 aa20.08■□□□□ 0.8
UBXN11-214ENST00000475591 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
UBXN11-214ENST00000475591 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
UBXN11-214ENST00000475591 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
UBXN11-214ENST00000475591 CAMSAP2Q08AD1 1489 aa20.03■□□□□ 0.8
UBXN11-214ENST00000475591 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
UBXN11-214ENST00000475591 ABCA8O94911 1581 aa19.98■□□□□ 0.79
UBXN11-214ENST00000475591 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
UBXN11-214ENST00000475591 ITSN2Q9NZM3 1697 aa19.97■□□□□ 0.79
UBXN11-214ENST00000475591 ATP10BO94823 1461 aa19.96■□□□□ 0.79
UBXN11-214ENST00000475591 L3MBTL2Q969R5 705 aa19.95■□□□□ 0.78
UBXN11-214ENST00000475591 PLEKHD1A6NEE1 506 aa19.94■□□□□ 0.78
UBXN11-214ENST00000475591 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
UBXN11-214ENST00000475591 ANKRD30BQ9BXX2 1392 aa19.93■□□□□ 0.78
UBXN11-214ENST00000475591 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
UBXN11-214ENST00000475591 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
UBXN11-214ENST00000475591 ABCC10Q5T3U5 1492 aa19.89■□□□□ 0.78
UBXN11-214ENST00000475591 CDC42BPAQ5VT25 1732 aa19.89■□□□□ 0.78
UBXN11-214ENST00000475591 PTPRGP23470 1445 aa19.88■□□□□ 0.77
UBXN11-214ENST00000475591 CROCC2H7BZ55 1655 aa19.88■□□□□ 0.77
UBXN11-214ENST00000475591 PZPP20742 1482 aa19.88■□□□□ 0.77
UBXN11-214ENST00000475591 CHD1O14646 1710 aa19.88■□□□□ 0.77
UBXN11-214ENST00000475591 ADGBQ8N7X0 1667 aa19.88■□□□□ 0.77
UBXN11-214ENST00000475591 ANP32CO43423 234 aa19.87■□□□□ 0.77
UBXN11-214ENST00000475591 RPRD2Q5VT52 1461 aaKnown RBP19.87■□□□□ 0.77
UBXN11-214ENST00000475591 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
UBXN11-214ENST00000475591 NBPF8Q3BBV2 869 aa19.84■□□□□ 0.77
UBXN11-214ENST00000475591 TEX14Q8IWB6 1497 aa19.84■□□□□ 0.77
UBXN11-214ENST00000475591 WASHC2AQ641Q2 1341 aa19.83■□□□□ 0.77
UBXN11-214ENST00000475591 ANKRD30AQ9BXX3 1397 aa19.83■□□□□ 0.76
UBXN11-214ENST00000475591 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
UBXN11-214ENST00000475591 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
UBXN11-214ENST00000475591 C9orf84Q5VXU9 1444 aa19.8■□□□□ 0.76
UBXN11-214ENST00000475591 ANKRD50Q9ULJ7 1429 aa19.8■□□□□ 0.76
UBXN11-214ENST00000475591 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
UBXN11-214ENST00000475591 ERCC6L2Q5T890 1561 aa19.79■□□□□ 0.76
UBXN11-214ENST00000475591 PKD2Q13563 968 aa19.78■□□□□ 0.76
UBXN11-214ENST00000475591 C11orf95C9JLR9 678 aaPredicted RBP19.77■□□□□ 0.76
UBXN11-214ENST00000475591 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
UBXN11-214ENST00000475591 KIAA1107Q9UPP5 1409 aa19.76■□□□□ 0.75
UBXN11-214ENST00000475591 SHANK2Q9UPX8 1470 aa19.74■□□□□ 0.75
UBXN11-214ENST00000475591 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
UBXN11-214ENST00000475591 TSPY4P0CV99 314 aa19.73■□□□□ 0.75
UBXN11-214ENST00000475591 TSPY10P0CW01 314 aa19.73■□□□□ 0.75
UBXN11-214ENST00000475591 NUP155O75694 1391 aa19.72■□□□□ 0.75
UBXN11-214ENST00000475591 MBD5Q9P267 1494 aa19.72■□□□□ 0.75
UBXN11-214ENST00000475591 SAMD9LQ8IVG5 1584 aa19.72■□□□□ 0.75
UBXN11-214ENST00000475591 CDC42BPBQ9Y5S2 1711 aa19.72■□□□□ 0.75
UBXN11-214ENST00000475591 KIF15Q9NS87 1388 aa19.71■□□□□ 0.75
UBXN11-214ENST00000475591 ZNF326Q5BKZ1 582 aaKnown RBP19.69■□□□□ 0.74
UBXN11-214ENST00000475591 PREX2Q70Z35 1606 aa19.69■□□□□ 0.74
UBXN11-214ENST00000475591 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
UBXN11-214ENST00000475591 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
UBXN11-214ENST00000475591 ARHGEF5Q12774 1597 aa19.68■□□□□ 0.74
UBXN11-214ENST00000475591 SPATA31E1Q6ZUB1 1445 aa19.67■□□□□ 0.74
UBXN11-214ENST00000475591 CNTLNQ9NXG0 1405 aa19.66■□□□□ 0.74
UBXN11-214ENST00000475591 CCDC141Q6ZP82 1450 aa19.65■□□□□ 0.74
UBXN11-214ENST00000475591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.65■□□□□ 0.74
UBXN11-214ENST00000475591 SYCP2Q9BX26 1530 aa19.64■□□□□ 0.74
UBXN11-214ENST00000475591 ABCC2Q92887 1545 aa19.64■□□□□ 0.73
UBXN11-214ENST00000475591 MYT1Q01538 1121 aa19.63■□□□□ 0.73
UBXN11-214ENST00000475591 ARHGAP5Q13017 1502 aa19.63■□□□□ 0.73
UBXN11-214ENST00000475591 KIF7Q2M1P5 1343 aa19.63■□□□□ 0.73
UBXN11-214ENST00000475591 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
UBXN11-214ENST00000475591 CCDC184Q52MB2 194 aa19.6■□□□□ 0.73
UBXN11-214ENST00000475591 CLASP1Q7Z460 1538 aa19.57■□□□□ 0.72
UBXN11-214ENST00000475591 USP47Q96K76 1375 aa19.57■□□□□ 0.72
UBXN11-214ENST00000475591 BCANQ96GW7 911 aa19.57■□□□□ 0.72
UBXN11-214ENST00000475591 KDM2AQ9Y2K7 1162 aa19.56■□□□□ 0.72
UBXN11-214ENST00000475591 FKBP8Q14318 412 aa19.55■□□□□ 0.72
UBXN11-214ENST00000475591 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
UBXN11-214ENST00000475591 HNRNPUQ00839 825 aaKnown RBP eCLIP19.55■□□□□ 0.72
UBXN11-214ENST00000475591 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
UBXN11-214ENST00000475591 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
UBXN11-214ENST00000475591 RSPH4AQ5TD94 716 aa19.54■□□□□ 0.72
UBXN11-214ENST00000475591 BCORL1Q5H9F3 1711 aa19.54■□□□□ 0.72
UBXN11-214ENST00000475591 POLR3GLQ9BT43 218 aa19.54■□□□□ 0.72
UBXN11-214ENST00000475591 ZCCHC11Q5TAX3 1644 aaKnown RBP19.54■□□□□ 0.72
UBXN11-214ENST00000475591 ARHGEF12Q9NZN5 1544 aa19.53■□□□□ 0.72
UBXN11-214ENST00000475591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.724e-6■■■■□ 19.8
UBXN11-214ENST00000475591 POLR1AO95602 1720 aaPredicted RBP19.52■□□□□ 0.72
UBXN11-214ENST00000475591 KDM5CP41229 1560 aa19.51■□□□□ 0.71
UBXN11-214ENST00000475591 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
UBXN11-214ENST00000475591 UHRF1BP1Q6BDS2 1440 aa19.5■□□□□ 0.71
UBXN11-214ENST00000475591 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
UBXN11-214ENST00000475591 MAST1Q9Y2H9 1570 aa19.5■□□□□ 0.71
UBXN11-214ENST00000475591 RALGAPBQ86X10 1494 aa19.49■□□□□ 0.71
UBXN11-214ENST00000475591 PLEKHH2Q8IVE3 1493 aa19.49■□□□□ 0.71
UBXN11-214ENST00000475591 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
UBXN11-214ENST00000475591 PLCH2O75038 1416 aa19.47■□□□□ 0.71
UBXN11-214ENST00000475591 FAM9BQ8IZU0 186 aa19.46■□□□□ 0.71
UBXN11-214ENST00000475591 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
UBXN11-214ENST00000475591 UHRF1BP1LA0JNW5 1464 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms