RNA–Protein interactions for RNA: ENST00000475514.5

REPIN1-208, Transcript of replication initiator 1, human

TSL 5

Gene REPIN1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
REPIN1-208	ENST00000475514	SCAPER	Q9BY12	1400 aa		33.7	■■■□□ 2.99
REPIN1-208	ENST00000475514	PLCH2	O75038	1416 aa		33.68	■■■□□ 2.98
REPIN1-208	ENST00000475514	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.65	■■■□□ 2.98
REPIN1-208	ENST00000475514	MYO5C	Q9NQX4	1742 aa		33.64	■■■□□ 2.98
REPIN1-208	ENST00000475514	EHMT2	Q96KQ7	1210 aa		33.63	■■■□□ 2.97
REPIN1-208	ENST00000475514	ATP10A	O60312	1499 aa		33.58	■■■□□ 2.97
REPIN1-208	ENST00000475514	C9orf84	Q5VXU9	1444 aa		33.56	■■■□□ 2.96
REPIN1-208	ENST00000475514	EFCAB2	Q5VUJ9	269 aa		33.56	■■■□□ 2.96
REPIN1-208	ENST00000475514	ARHGEF12	Q9NZN5	1544 aa		33.56	■■■□□ 2.96
REPIN1-208	ENST00000475514	KIF14	Q15058	1648 aa		33.55	■■■□□ 2.96
REPIN1-208	ENST00000475514	CERK	Q8TCT0	537 aa		33.54	■■■□□ 2.96
REPIN1-208	ENST00000475514	FMN1	Q68DA7	1419 aa		33.53	■■■□□ 2.96
REPIN1-208	ENST00000475514	PREX1	Q8TCU6	1659 aa		33.53	■■■□□ 2.96
REPIN1-208	ENST00000475514	UBTF	P17480	764 aa	Known RBP	33.53	■■■□□ 2.96
REPIN1-208	ENST00000475514	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.49	■■■□□ 2.95
REPIN1-208	ENST00000475514	CEBPA	P49715	358 aa	Predicted RBP	33.48	■■■□□ 2.95
REPIN1-208	ENST00000475514	ARHGAP35	Q9NRY4	1499 aa		33.48	■■■□□ 2.95
REPIN1-208	ENST00000475514	ARHGAP5	Q13017	1502 aa		33.47	■■■□□ 2.95
REPIN1-208	ENST00000475514	ZNF518A	Q6AHZ1	1483 aa		33.45	■■■□□ 2.95
REPIN1-208	ENST00000475514	MYT1L	Q9UL68	1186 aa		33.43	■■■□□ 2.94
REPIN1-208	ENST00000475514	AFAP1	Q8N556	730 aa		33.42	■■■□□ 2.94
REPIN1-208	ENST00000475514	TRO	Q12816	1431 aa	Predicted RBP	33.42	■■■□□ 2.94
REPIN1-208	ENST00000475514	LRRIQ1	Q96JM4	1722 aa		33.42	■■■□□ 2.94
REPIN1-208	ENST00000475514	KDM5C	P41229	1560 aa		33.41	■■■□□ 2.94
REPIN1-208	ENST00000475514	CLIP1	P30622	1438 aa		33.38	■■■□□ 2.93
REPIN1-208	ENST00000475514	STRC	Q7RTU9	1775 aa		33.37	■■■□□ 2.93
REPIN1-208	ENST00000475514	DIP2C	Q9Y2E4	1556 aa		33.37	■■■□□ 2.93
REPIN1-208	ENST00000475514	CDC42BPB	Q9Y5S2	1711 aa		33.36	■■■□□ 2.93
REPIN1-208	ENST00000475514	SETD1B	Q9UPS6	1966 aa	Known RBP	33.34	■■■□□ 2.93
REPIN1-208	ENST00000475514	UHRF1BP1	Q6BDS2	1440 aa		33.33	■■■□□ 2.93
REPIN1-208	ENST00000475514	ABCA6	Q8N139	1617 aa		33.32	■■■□□ 2.92
REPIN1-208	ENST00000475514	DMRT2	Q9Y5R5	561 aa		33.28	■■■□□ 2.92
REPIN1-208	ENST00000475514	RERE	Q9P2R6	1566 aa		33.28	■■■□□ 2.92
REPIN1-208	ENST00000475514	C3	P01024	1663 aa		33.28	■■■□□ 2.92
REPIN1-208	ENST00000475514	PREX2	Q70Z35	1606 aa		33.26	■■■□□ 2.91
REPIN1-208	ENST00000475514	MLH3	Q9UHC1	1453 aa		33.25	■■■□□ 2.91
REPIN1-208	ENST00000475514	ITSN2	Q9NZM3	1697 aa		33.23	■■■□□ 2.91
REPIN1-208	ENST00000475514	ABCC1	P33527	1531 aa		33.23	■■■□□ 2.91
REPIN1-208	ENST00000475514	TRAPPC8	Q9Y2L5	1435 aa		33.22	■■■□□ 2.91
REPIN1-208	ENST00000475514	ESF1	Q9H501	851 aa	Known RBP	33.21	■■■□□ 2.91
REPIN1-208	ENST00000475514	AGL	P35573	1532 aa		33.18	■■■□□ 2.9
REPIN1-208	ENST00000475514	KIDINS220	Q9ULH0	1771 aa		33.16	■■■□□ 2.9
REPIN1-208	ENST00000475514	CCDC18	Q5T9S5	1454 aa		33.15	■■■□□ 2.9
REPIN1-208	ENST00000475514	CDC42BPA	Q5VT25	1732 aa		33.15	■■■□□ 2.9
REPIN1-208	ENST00000475514	CASKIN1	Q8WXD9	1431 aa		33.12	■■■□□ 2.89
REPIN1-208	ENST00000475514	DISP3	Q9P2K9	1392 aa		33.12	■■■□□ 2.89
REPIN1-208	ENST00000475514	PTPRT	O14522	1441 aa		33.11	■■■□□ 2.89
REPIN1-208	ENST00000475514	CHIC1	Q5VXU3	224 aa		33.1	■■■□□ 2.89
REPIN1-208	ENST00000475514	CNTLN	Q9NXG0	1405 aa		33.05	■■■□□ 2.88
REPIN1-208	ENST00000475514	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.04	■■■□□ 2.88
REPIN1-208	ENST00000475514	ILDR2	Q71H61	639 aa		33.03	■■■□□ 2.88
REPIN1-208	ENST00000475514	SAMD9L	Q8IVG5	1584 aa		33.03	■■■□□ 2.88
REPIN1-208	ENST00000475514	NCOA1	Q15788	1441 aa		33.01	■■■□□ 2.87
REPIN1-208	ENST00000475514	SUPT6H	Q7KZ85	1726 aa	Known RBP	33	■■■□□ 2.87
REPIN1-208	ENST00000475514	LTBP4	Q8N2S1	1624 aa		33	■■■□□ 2.87
REPIN1-208	ENST00000475514	SYCP2	Q9BX26	1530 aa		32.99	■■■□□ 2.87
REPIN1-208	ENST00000475514	MROH2A	A6NES4	1674 aa		32.99	■■■□□ 2.87
REPIN1-208	ENST00000475514	FYCO1	Q9BQS8	1478 aa		32.97	■■■□□ 2.87
REPIN1-208	ENST00000475514	CAMSAP1	Q5T5Y3	1602 aa		32.95	■■■□□ 2.87
REPIN1-208	ENST00000475514	SPAG9	O60271	1321 aa	Known RBP	32.94	■■■□□ 2.86
REPIN1-208	ENST00000475514	SPATA31D1	Q6ZQQ2	1576 aa		32.93	■■■□□ 2.86
REPIN1-208	ENST00000475514	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
REPIN1-208	ENST00000475514	NPAT	Q14207	1427 aa		32.93	■■■□□ 2.86
REPIN1-208	ENST00000475514	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.92	■■■□□ 2.86
REPIN1-208	ENST00000475514	ZMYM3	Q14202	1370 aa		32.91	■■■□□ 2.86
REPIN1-208	ENST00000475514	CLTC	Q00610	1675 aa	Known RBP	32.91	■■■□□ 2.86
REPIN1-208	ENST00000475514	ATP7A	Q04656	1500 aa		32.89	■■■□□ 2.86
REPIN1-208	ENST00000475514	IQSEC2	Q5JU85	1478 aa		32.87	■■■□□ 2.85
REPIN1-208	ENST00000475514	SOCS7	O14512	581 aa		32.86	■■■□□ 2.85
REPIN1-208	ENST00000475514	NCKAP5L	Q9HCH0	1330 aa		32.85	■■■□□ 2.85
REPIN1-208	ENST00000475514	INO80	Q9ULG1	1556 aa	Predicted RBP	32.85	■■■□□ 2.85
REPIN1-208	ENST00000475514	MYO3A	Q8NEV4	1616 aa		32.84	■■■□□ 2.85
REPIN1-208	ENST00000475514	PLXNC1	O60486	1568 aa		32.83	■■■□□ 2.85
REPIN1-208	ENST00000475514	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.82	■■■□□ 2.84
REPIN1-208	ENST00000475514	ZNF142	P52746	1687 aa	Predicted RBP	32.82	■■■□□ 2.84
REPIN1-208	ENST00000475514	A2M	P01023	1474 aa		32.81	■■■□□ 2.84
REPIN1-208	ENST00000475514	PLEKHH2	Q8IVE3	1493 aa		32.8	■■■□□ 2.84
REPIN1-208	ENST00000475514	KIAA1107	Q9UPP5	1409 aa		32.8	■■■□□ 2.84
REPIN1-208	ENST00000475514	CCNB3	Q8WWL7	1395 aa		32.79	■■■□□ 2.84
REPIN1-208	ENST00000475514	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.78	■■■□□ 2.84
REPIN1-208	ENST00000475514	GGT6	Q6P531	493 aa		32.78	■■■□□ 2.84
REPIN1-208	ENST00000475514	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.76	■■■□□ 2.84
REPIN1-208	ENST00000475514	PTPRK	Q15262	1439 aa		32.75	■■■□□ 2.83
REPIN1-208	ENST00000475514	ADGB	Q8N7X0	1667 aa		32.74	■■■□□ 2.83
REPIN1-208	ENST00000475514	PLA2R1	Q13018	1463 aa		32.72	■■■□□ 2.83
REPIN1-208	ENST00000475514	MTUS2	Q5JR59	1369 aa		32.71	■■■□□ 2.83
REPIN1-208	ENST00000475514	UBAP1L	F5GYI3	381 aa		32.7	■■■□□ 2.83
REPIN1-208	ENST00000475514	PKD2	Q13563	968 aa		32.7	■■■□□ 2.83
REPIN1-208	ENST00000475514	TCOF1	Q13428	1488 aa	Known RBP	32.67	■■■□□ 2.82
REPIN1-208	ENST00000475514	ZNF644	Q9H582	1327 aa	Predicted RBP	32.66	■■■□□ 2.82
REPIN1-208	ENST00000475514	TIAM1	Q13009	1591 aa		32.65	■■■□□ 2.82
REPIN1-208	ENST00000475514	PPP6R1	Q9UPN7	881 aa		32.61	■■■□□ 2.81
REPIN1-208	ENST00000475514	A2ML1	A8K2U0	1454 aa		32.59	■■■□□ 2.81
REPIN1-208	ENST00000475514	DNMT1	P26358	1616 aa	Known RBP	32.59	■■■□□ 2.81
REPIN1-208	ENST00000475514	MBD5	Q9P267	1494 aa		32.58	■■■□□ 2.81
REPIN1-208	ENST00000475514	EHBP1L1	Q8N3D4	1523 aa		32.56	■■■□□ 2.8
REPIN1-208	ENST00000475514	POLR1A	O95602	1720 aa	Predicted RBP	32.54	■■■□□ 2.8
REPIN1-208	ENST00000475514	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.52	■■■□□ 2.8
REPIN1-208	ENST00000475514	DHX29	Q7Z478	1369 aa	Known RBP	32.52	■■■□□ 2.8
REPIN1-208	ENST00000475514	TNR	Q92752	1358 aa		32.48	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms