RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CAMSAP2Q08AD1 1489 aa22.28■■□□□ 1.16
RPUSD3-215ENST00000475470 CLASP1Q7Z460 1538 aa22.28■■□□□ 1.16
RPUSD3-215ENST00000475470 ROCK1Q13464 1354 aa22.28■■□□□ 1.16
RPUSD3-215ENST00000475470 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
RPUSD3-215ENST00000475470 TIMELESSQ9UNS1 1208 aa22.26■■□□□ 1.15
RPUSD3-215ENST00000475470 ABCC10Q5T3U5 1492 aa22.25■■□□□ 1.15
RPUSD3-215ENST00000475470 TRIM52Q96A61 297 aa22.23■■□□□ 1.15
RPUSD3-215ENST00000475470 CDC42BPAQ5VT25 1732 aa22.22■■□□□ 1.15
RPUSD3-215ENST00000475470 KDM6BO15054 1643 aa22.22■■□□□ 1.15
RPUSD3-215ENST00000475470 ABCC2Q92887 1545 aa22.2■■□□□ 1.14
RPUSD3-215ENST00000475470 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
RPUSD3-215ENST00000475470 TONSLQ96HA7 1378 aa22.14■■□□□ 1.13
RPUSD3-215ENST00000475470 CROCC2H7BZ55 1655 aa22.14■■□□□ 1.13
RPUSD3-215ENST00000475470 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.13
RPUSD3-215ENST00000475470 MPHOSPH9Q99550 1183 aa22.12■■□□□ 1.13
RPUSD3-215ENST00000475470 NCOA1Q15788 1441 aa22.12■■□□□ 1.13
RPUSD3-215ENST00000475470 PPP1R15AO75807 674 aaPredicted RBP22.11■■□□□ 1.13
RPUSD3-215ENST00000475470 ADGRL2O95490 1459 aa22.11■■□□□ 1.13
RPUSD3-215ENST00000475470 ANKRD30AQ9BXX3 1397 aa22.1■■□□□ 1.13
RPUSD3-215ENST00000475470 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
RPUSD3-215ENST00000475470 UHRF1BP1LA0JNW5 1464 aa22.09■■□□□ 1.13
RPUSD3-215ENST00000475470 PREX2Q70Z35 1606 aa22.07■■□□□ 1.12
RPUSD3-215ENST00000475470 CDC42BPBQ9Y5S2 1711 aa22.06■■□□□ 1.12
RPUSD3-215ENST00000475470 TSPY4P0CV99 314 aa22.06■■□□□ 1.12
RPUSD3-215ENST00000475470 TSPY10P0CW01 314 aa22.06■■□□□ 1.12
RPUSD3-215ENST00000475470 SHANK2Q9UPX8 1470 aa22.06■■□□□ 1.12
RPUSD3-215ENST00000475470 ZCCHC11Q5TAX3 1644 aaKnown RBP22.05■■□□□ 1.12
RPUSD3-215ENST00000475470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.05■■□□□ 1.12
RPUSD3-215ENST00000475470 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
RPUSD3-215ENST00000475470 C9orf84Q5VXU9 1444 aa22.04■■□□□ 1.12
RPUSD3-215ENST00000475470 MIER1Q8N108 512 aa22.04■■□□□ 1.12
RPUSD3-215ENST00000475470 TTC37Q6PGP7 1564 aa22.03■■□□□ 1.12
RPUSD3-215ENST00000475470 KCNH8Q96L42 1107 aa22.03■■□□□ 1.12
RPUSD3-215ENST00000475470 KDM5BQ9UGL1 1544 aa22.03■■□□□ 1.12
RPUSD3-215ENST00000475470 ARHGEF5Q12774 1597 aa22.03■■□□□ 1.12
RPUSD3-215ENST00000475470 SAMD9LQ8IVG5 1584 aa22.02■■□□□ 1.12
RPUSD3-215ENST00000475470 SLC4A1APQ9BWU0 796 aaKnown RBP22.01■■□□□ 1.11
RPUSD3-215ENST00000475470 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
RPUSD3-215ENST00000475470 MBD5Q9P267 1494 aa22■■□□□ 1.11
RPUSD3-215ENST00000475470 FOXD1Q16676 465 aa22■■□□□ 1.11
RPUSD3-215ENST00000475470 RSPH4AQ5TD94 716 aa21.99■■□□□ 1.11
RPUSD3-215ENST00000475470 ANKRD50Q9ULJ7 1429 aa21.99■■□□□ 1.11
RPUSD3-215ENST00000475470 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
RPUSD3-215ENST00000475470 CCDC141Q6ZP82 1450 aa21.97■■□□□ 1.11
RPUSD3-215ENST00000475470 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
RPUSD3-215ENST00000475470 ANKRD30BQ9BXX2 1392 aa21.95■■□□□ 1.1
RPUSD3-215ENST00000475470 PZPP20742 1482 aa21.94■■□□□ 1.1
RPUSD3-215ENST00000475470 SYCP2Q9BX26 1530 aa21.93■■□□□ 1.1
RPUSD3-215ENST00000475470 KIF15Q9NS87 1388 aa21.92■■□□□ 1.1
RPUSD3-215ENST00000475470 PLEKHH2Q8IVE3 1493 aa21.92■■□□□ 1.1
RPUSD3-215ENST00000475470 PLCH2O75038 1416 aa21.9■■□□□ 1.1
RPUSD3-215ENST00000475470 KIAA1107Q9UPP5 1409 aa21.89■■□□□ 1.1
RPUSD3-215ENST00000475470 RPRD2Q5VT52 1461 aaKnown RBP21.88■■□□□ 1.09
RPUSD3-215ENST00000475470 EFCAB2Q5VUJ9 269 aa21.88■■□□□ 1.09
RPUSD3-215ENST00000475470 NUP155O75694 1391 aa21.86■■□□□ 1.09
RPUSD3-215ENST00000475470 L3MBTL2Q969R5 705 aa21.86■■□□□ 1.09
RPUSD3-215ENST00000475470 PKD2Q13563 968 aa21.85■■□□□ 1.09
RPUSD3-215ENST00000475470 MAST1Q9Y2H9 1570 aa21.85■■□□□ 1.09
RPUSD3-215ENST00000475470 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
RPUSD3-215ENST00000475470 WDR7Q9Y4E6 1490 aa21.84■■□□□ 1.09
RPUSD3-215ENST00000475470 CENPBP07199 599 aaPredicted RBP21.84■■□□□ 1.09
RPUSD3-215ENST00000475470 KDM5DQ9BY66 1539 aa21.81■■□□□ 1.08
RPUSD3-215ENST00000475470 ARHGEF12Q9NZN5 1544 aa21.81■■□□□ 1.08
RPUSD3-215ENST00000475470 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
RPUSD3-215ENST00000475470 ABCC1P33527 1531 aa21.78■■□□□ 1.08
RPUSD3-215ENST00000475470 ARAP3Q8WWN8 1544 aa21.78■■□□□ 1.08
RPUSD3-215ENST00000475470 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.08
RPUSD3-215ENST00000475470 DDX10Q13206 875 aaKnown RBP21.77■■□□□ 1.08
RPUSD3-215ENST00000475470 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.08
RPUSD3-215ENST00000475470 PLXNC1O60486 1568 aa21.77■■□□□ 1.08
RPUSD3-215ENST00000475470 NPM1P06748 294 aaKnown RBP eCLIP21.75■■□□□ 1.07
RPUSD3-215ENST00000475470 ASXL2Q76L83 1435 aa21.75■■□□□ 1.07
RPUSD3-215ENST00000475470 ABCA9Q8IUA7 1624 aa21.72■■□□□ 1.07
RPUSD3-215ENST00000475470 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
RPUSD3-215ENST00000475470 DUOX2Q9NRD8 1548 aa21.71■■□□□ 1.07
RPUSD3-215ENST00000475470 FAM135AQ9P2D6 1515 aa21.71■■□□□ 1.07
RPUSD3-215ENST00000475470 EIF4G2P78344 907 aaKnown RBP eCLIP21.69■■□□□ 1.06
RPUSD3-215ENST00000475470 NBPF8Q3BBV2 869 aa21.69■■□□□ 1.06
RPUSD3-215ENST00000475470 FANCAO15360 1455 aa21.69■■□□□ 1.06
RPUSD3-215ENST00000475470 HSPA5P11021 654 aaKnown RBP21.68■■□□□ 1.06
RPUSD3-215ENST00000475470 UNC13BO14795 1591 aa21.68■■□□□ 1.06
RPUSD3-215ENST00000475470 SPAG9O60271 1321 aaKnown RBP21.67■■□□□ 1.06
RPUSD3-215ENST00000475470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.67■■□□□ 1.06
RPUSD3-215ENST00000475470 ERBINQ96RT1 1412 aa21.67■■□□□ 1.06
RPUSD3-215ENST00000475470 AFAP1Q8N556 730 aa21.66■■□□□ 1.06
RPUSD3-215ENST00000475470 RTEL1-TNFRSF6BF6WH68 1400 aa21.64■■□□□ 1.05
RPUSD3-215ENST00000475470 ADGRL1O94910 1474 aa21.61■■□□□ 1.05
RPUSD3-215ENST00000475470 IQGAP3Q86VI3 1631 aa21.6■■□□□ 1.05
RPUSD3-215ENST00000475470 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
RPUSD3-215ENST00000475470 SCAPERQ9BY12 1400 aa21.59■■□□□ 1.05
RPUSD3-215ENST00000475470 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.04
RPUSD3-215ENST00000475470 ZNF326Q5BKZ1 582 aaKnown RBP21.58■■□□□ 1.04
RPUSD3-215ENST00000475470 MYT1LQ9UL68 1186 aa21.56■■□□□ 1.04
RPUSD3-215ENST00000475470 ANP32CO43423 234 aa21.55■■□□□ 1.04
RPUSD3-215ENST00000475470 CCDC144AA2RUR9 1427 aa21.55■■□□□ 1.04
RPUSD3-215ENST00000475470 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
RPUSD3-215ENST00000475470 WASHC2AQ641Q2 1341 aa21.55■■□□□ 1.04
RPUSD3-215ENST00000475470 INO80Q9ULG1 1556 aaPredicted RBP21.54■■□□□ 1.04
RPUSD3-215ENST00000475470 CD109Q6YHK3 1445 aa21.53■■□□□ 1.04
RPUSD3-215ENST00000475470 UHRF1BP1Q6BDS2 1440 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms