RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 TTC37Q6PGP7 1564 aa16.87■□□□□ 0.29
PTP4A2-204ENST00000475464 RIMS1Q86UR5 1692 aaKnown RBP16.87■□□□□ 0.29
PTP4A2-204ENST00000475464 RICTORQ6R327 1708 aa16.87■□□□□ 0.29
PTP4A2-204ENST00000475464 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
PTP4A2-204ENST00000475464 ZMYM4Q5VZL5 1548 aa16.85■□□□□ 0.29
PTP4A2-204ENST00000475464 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
PTP4A2-204ENST00000475464 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
PTP4A2-204ENST00000475464 ATP10AO60312 1499 aa16.81■□□□□ 0.28
PTP4A2-204ENST00000475464 CEBPAP49715 358 aaPredicted RBP16.81■□□□□ 0.28
PTP4A2-204ENST00000475464 AFAP1Q8N556 730 aa16.81■□□□□ 0.28
PTP4A2-204ENST00000475464 CERKQ8TCT0 537 aa16.8■□□□□ 0.28
PTP4A2-204ENST00000475464 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
PTP4A2-204ENST00000475464 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
PTP4A2-204ENST00000475464 CLIP1P30622 1438 aa16.76■□□□□ 0.27
PTP4A2-204ENST00000475464 TROQ12816 1431 aaPredicted RBP16.75■□□□□ 0.27
PTP4A2-204ENST00000475464 SIGLEC1Q9BZZ2 1709 aa16.75■□□□□ 0.27
PTP4A2-204ENST00000475464 ESF1Q9H501 851 aaKnown RBP16.74■□□□□ 0.27
PTP4A2-204ENST00000475464 ARHGAP5Q13017 1502 aa16.74■□□□□ 0.27
PTP4A2-204ENST00000475464 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
PTP4A2-204ENST00000475464 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
PTP4A2-204ENST00000475464 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
PTP4A2-204ENST00000475464 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
PTP4A2-204ENST00000475464 FER1L4A9Z1Z3 1794 aa16.72■□□□□ 0.27
PTP4A2-204ENST00000475464 KIF14Q15058 1648 aa16.7■□□□□ 0.26
PTP4A2-204ENST00000475464 MYO5CQ9NQX4 1742 aa16.69■□□□□ 0.26
PTP4A2-204ENST00000475464 UHRF1BP1Q6BDS2 1440 aa16.68■□□□□ 0.26
PTP4A2-204ENST00000475464 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
PTP4A2-204ENST00000475464 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
PTP4A2-204ENST00000475464 KDM5CP41229 1560 aa16.64■□□□□ 0.25
PTP4A2-204ENST00000475464 MLH3Q9UHC1 1453 aa16.63■□□□□ 0.25
PTP4A2-204ENST00000475464 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
PTP4A2-204ENST00000475464 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
PTP4A2-204ENST00000475464 DIP2CQ9Y2E4 1556 aa16.6■□□□□ 0.25
PTP4A2-204ENST00000475464 CCDC18Q5T9S5 1454 aa16.6■□□□□ 0.25
PTP4A2-204ENST00000475464 HNRNPMP52272 730 aaKnown RBP eCLIP16.58■□□□□ 0.24
PTP4A2-204ENST00000475464 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
PTP4A2-204ENST00000475464 SPAG9O60271 1321 aaKnown RBP16.57■□□□□ 0.24
PTP4A2-204ENST00000475464 REREQ9P2R6 1566 aa16.56■□□□□ 0.24
PTP4A2-204ENST00000475464 AGLP35573 1532 aa16.56■□□□□ 0.24
PTP4A2-204ENST00000475464 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
PTP4A2-204ENST00000475464 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
PTP4A2-204ENST00000475464 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
PTP4A2-204ENST00000475464 ABCC1P33527 1531 aa16.55■□□□□ 0.24
PTP4A2-204ENST00000475464 PTPRTO14522 1441 aa16.55■□□□□ 0.24
PTP4A2-204ENST00000475464 CNTLNQ9NXG0 1405 aa16.55■□□□□ 0.24
PTP4A2-204ENST00000475464 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
PTP4A2-204ENST00000475464 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
PTP4A2-204ENST00000475464 PREX2Q70Z35 1606 aa16.53■□□□□ 0.24
PTP4A2-204ENST00000475464 LRRIQ1Q96JM4 1722 aa16.53■□□□□ 0.24
PTP4A2-204ENST00000475464 ZMYM3Q14202 1370 aa16.52■□□□□ 0.24
PTP4A2-204ENST00000475464 C3P01024 1663 aa16.5■□□□□ 0.23
PTP4A2-204ENST00000475464 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
PTP4A2-204ENST00000475464 GGT6Q6P531 493 aa16.5■□□□□ 0.23
PTP4A2-204ENST00000475464 GPATCH8Q9UKJ3 1502 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-204ENST00000475464 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
PTP4A2-204ENST00000475464 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
PTP4A2-204ENST00000475464 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
PTP4A2-204ENST00000475464 CCNB3Q8WWL7 1395 aa16.49■□□□□ 0.23
PTP4A2-204ENST00000475464 SAMD9LQ8IVG5 1584 aa16.48■□□□□ 0.23
PTP4A2-204ENST00000475464 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
PTP4A2-204ENST00000475464 KIDINS220Q9ULH0 1771 aa16.48■□□□□ 0.23
PTP4A2-204ENST00000475464 NPATQ14207 1427 aa16.47■□□□□ 0.23
PTP4A2-204ENST00000475464 SYCP2Q9BX26 1530 aa16.46■□□□□ 0.23
PTP4A2-204ENST00000475464 MTUS2Q5JR59 1369 aa16.46■□□□□ 0.23
PTP4A2-204ENST00000475464 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
PTP4A2-204ENST00000475464 CDC42BPAQ5VT25 1732 aa16.45■□□□□ 0.22
PTP4A2-204ENST00000475464 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
PTP4A2-204ENST00000475464 A2MP01023 1474 aa16.43■□□□□ 0.22
PTP4A2-204ENST00000475464 SOCS7O14512 581 aa16.43■□□□□ 0.22
PTP4A2-204ENST00000475464 PKD2Q13563 968 aa16.43■□□□□ 0.22
PTP4A2-204ENST00000475464 CAMSAP1Q5T5Y3 1602 aa16.43■□□□□ 0.22
PTP4A2-204ENST00000475464 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
PTP4A2-204ENST00000475464 LTBP4Q8N2S1 1624 aa16.42■□□□□ 0.22
PTP4A2-204ENST00000475464 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
PTP4A2-204ENST00000475464 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
PTP4A2-204ENST00000475464 ATP7AQ04656 1500 aa16.41■□□□□ 0.22
PTP4A2-204ENST00000475464 UBAP1LF5GYI3 381 aa16.41■□□□□ 0.22
PTP4A2-204ENST00000475464 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
PTP4A2-204ENST00000475464 IQSEC2Q5JU85 1478 aa16.39■□□□□ 0.21
PTP4A2-204ENST00000475464 PTPRKQ15262 1439 aa16.38■□□□□ 0.21
PTP4A2-204ENST00000475464 MROH2AA6NES4 1674 aa16.37■□□□□ 0.21
PTP4A2-204ENST00000475464 KIF3BO15066 747 aa16.35■□□□□ 0.21
PTP4A2-204ENST00000475464 PLXNC1O60486 1568 aa16.34■□□□□ 0.21
PTP4A2-204ENST00000475464 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
PTP4A2-204ENST00000475464 PLA2R1Q13018 1463 aa16.34■□□□□ 0.21
PTP4A2-204ENST00000475464 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
PTP4A2-204ENST00000475464 DHX29Q7Z478 1369 aaKnown RBP16.33■□□□□ 0.2
PTP4A2-204ENST00000475464 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
PTP4A2-204ENST00000475464 SPATA31D1Q6ZQQ2 1576 aa16.32■□□□□ 0.2
PTP4A2-204ENST00000475464 CEP170BQ9Y4F5 1589 aaPredicted RBP16.31■□□□□ 0.2
PTP4A2-204ENST00000475464 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
PTP4A2-204ENST00000475464 MBD5Q9P267 1494 aa16.31■□□□□ 0.2
PTP4A2-204ENST00000475464 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
PTP4A2-204ENST00000475464 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
PTP4A2-204ENST00000475464 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
PTP4A2-204ENST00000475464 RSPH4AQ5TD94 716 aa16.3■□□□□ 0.2
PTP4A2-204ENST00000475464 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
PTP4A2-204ENST00000475464 TNRQ92752 1358 aa16.29■□□□□ 0.2
PTP4A2-204ENST00000475464 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
PTP4A2-204ENST00000475464 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms