RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 TROQ12816 1431 aaPredicted RBP7.66□□□□□ -1.18
CBWD1-212ENST00000475411 CNGB1Q14028 1251 aaPredicted RBP7.66□□□□□ -1.18
CBWD1-212ENST00000475411 RGL3Q3MIN7 710 aa7.66□□□□□ -1.18
CBWD1-212ENST00000475411 AKNAQ7Z591 1439 aa7.66□□□□□ -1.18
CBWD1-212ENST00000475411 NPM2Q86SE8 214 aaKnown RBP7.66□□□□□ -1.18
CBWD1-212ENST00000475411 DMRT2Q9Y5R5 561 aa7.65□□□□□ -1.18
CBWD1-212ENST00000475411 NUP155O75694 1391 aa7.65□□□□□ -1.19
CBWD1-212ENST00000475411 LMOD2Q6P5Q4 547 aa7.65□□□□□ -1.19
CBWD1-212ENST00000475411 RTL5Q5HYW3 569 aaPredicted RBP7.64□□□□□ -1.19
CBWD1-212ENST00000475411 THOC2Q8NI27 1593 aaKnown RBP7.64□□□□□ -1.19
CBWD1-212ENST00000475411 A0A0G2JS52 829 aa7.64□□□□□ -1.19
CBWD1-212ENST00000475411 EHBP1L1Q8N3D4 1523 aa7.63□□□□□ -1.19
CBWD1-212ENST00000475411 ZBTB7CA1YPR0 619 aa7.63□□□□□ -1.19
CBWD1-212ENST00000475411 SCAPERQ9BY12 1400 aa7.62□□□□□ -1.19
CBWD1-212ENST00000475411 DENND4BO75064 1496 aaPredicted RBP7.62□□□□□ -1.19
CBWD1-212ENST00000475411 NUP160Q12769 1436 aa7.61□□□□□ -1.19
CBWD1-212ENST00000475411 THEMISQ8N1K5 641 aaPredicted RBP7.61□□□□□ -1.19
CBWD1-212ENST00000475411 PBRM1Q86U86 1689 aa7.61□□□□□ -1.19
CBWD1-212ENST00000475411 KIF14Q15058 1648 aa7.61□□□□□ -1.19
CBWD1-212ENST00000475411 ASXL2Q76L83 1435 aa7.6□□□□□ -1.19
CBWD1-212ENST00000475411 ADGRL1O94910 1474 aa7.59□□□□□ -1.19
CBWD1-212ENST00000475411 PKD2Q13563 968 aa7.59□□□□□ -1.19
CBWD1-212ENST00000475411 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
CBWD1-212ENST00000475411 PPP6R1Q9UPN7 881 aa7.59□□□□□ -1.19
CBWD1-212ENST00000475411 VGFO15240 615 aaPredicted RBP7.59□□□□□ -1.19
CBWD1-212ENST00000475411 FOXD1Q16676 465 aa7.59□□□□□ -1.19
CBWD1-212ENST00000475411 ANP32CO43423 234 aa7.59□□□□□ -1.2
CBWD1-212ENST00000475411 EIF3AQ14152 1382 aaKnown RBP7.58□□□□□ -1.2
CBWD1-212ENST00000475411 WDR7Q9Y4E6 1490 aa7.58□□□□□ -1.2
CBWD1-212ENST00000475411 KIF15Q9NS87 1388 aa7.58□□□□□ -1.2
CBWD1-212ENST00000475411 SETD5Q9C0A6 1442 aa7.58□□□□□ -1.2
CBWD1-212ENST00000475411 PLEKHG5O94827 1062 aa7.57□□□□□ -1.2
CBWD1-212ENST00000475411 MEX3CQ5U5Q3 659 aaKnown RBP7.57□□□□□ -1.2
CBWD1-212ENST00000475411 ABCC2Q92887 1545 aa7.57□□□□□ -1.2
CBWD1-212ENST00000475411 ANKLE2Q86XL3 938 aa7.57□□□□□ -1.2
CBWD1-212ENST00000475411 EPRSP07814 1512 aaKnown RBP7.56□□□□□ -1.2
CBWD1-212ENST00000475411 MIA2Q96PC5 1412 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 RAPGEF3O95398 923 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 CFAP53Q96M91 514 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 CARD11Q9BXL7 1154 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 UGGT2Q9NYU1 1516 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 NCOA2Q15596 1464 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 ATF3P18847 181 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 EIF4G2P78344 907 aaKnown RBP eCLIP7.56□□□□□ -1.2
CBWD1-212ENST00000475411 KANK4Q5T7N3 995 aaPredicted RBP7.56□□□□□ -1.2
CBWD1-212ENST00000475411 AFAP1Q8N556 730 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 ABCA5Q8WWZ7 1642 aa7.56□□□□□ -1.2
CBWD1-212ENST00000475411 ZBTB47Q9UFB7 747 aaPredicted RBP7.55□□□□□ -1.2
CBWD1-212ENST00000475411 CEP170Q5SW79 1584 aa7.55□□□□□ -1.2
CBWD1-212ENST00000475411 SRPK2P78362 688 aaKnown RBP7.55□□□□□ -1.2
CBWD1-212ENST00000475411 FANCAO15360 1455 aa7.55□□□□□ -1.2
CBWD1-212ENST00000475411 HDGFL2Q7Z4V5 671 aaPredicted RBP7.55□□□□□ -1.2
CBWD1-212ENST00000475411 STAC3Q96MF2 364 aa7.55□□□□□ -1.2
CBWD1-212ENST00000475411 CCDC144AA2RUR9 1427 aa7.55□□□□□ -1.2
CBWD1-212ENST00000475411 ARHGEF11O15085 1522 aa7.55□□□□□ -1.2
CBWD1-212ENST00000475411 DCAF11Q8TEB1 546 aa7.54□□□□□ -1.2
CBWD1-212ENST00000475411 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
CBWD1-212ENST00000475411 FGD6Q6ZV73 1430 aa7.54□□□□□ -1.2
CBWD1-212ENST00000475411 EIF5BO60841 1220 aaKnown RBP7.53□□□□□ -1.2
CBWD1-212ENST00000475411 RAPGEF6Q8TEU7 1601 aa7.53□□□□□ -1.2
CBWD1-212ENST00000475411 SUPT6HQ7KZ85 1726 aaKnown RBP7.53□□□□□ -1.2
CBWD1-212ENST00000475411 TARBP1Q13395 1621 aaKnown RBP7.53□□□□□ -1.2
CBWD1-212ENST00000475411 STK26Q9P289 416 aa7.53□□□□□ -1.2
CBWD1-212ENST00000475411 LRRC9Q6ZRR7 1453 aa7.53□□□□□ -1.2
CBWD1-212ENST00000475411 CTTNBP2Q8WZ74 1663 aa7.53□□□□□ -1.2
CBWD1-212ENST00000475411 KIAA0556O60303 1618 aa7.53□□□□□ -1.2
CBWD1-212ENST00000475411 SLC52A1Q9NWF4 448 aa7.53□□□□□ -1.2
CBWD1-212ENST00000475411 CCDC141Q6ZP82 1450 aa7.52□□□□□ -1.21
CBWD1-212ENST00000475411 TMF1P82094 1093 aa7.52□□□□□ -1.21
CBWD1-212ENST00000475411 CLSPNQ9HAW4 1339 aa7.52□□□□□ -1.21
CBWD1-212ENST00000475411 DAXXQ9UER7 740 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-212ENST00000475411 C9orf84Q5VXU9 1444 aa7.52□□□□□ -1.21
CBWD1-212ENST00000475411 TIMELESSQ9UNS1 1208 aa7.51□□□□□ -1.21
CBWD1-212ENST00000475411 TXNDC2Q86VQ3 553 aa7.51□□□□□ -1.21
CBWD1-212ENST00000475411 NGDNQ8NEJ9 315 aaKnown RBP7.51□□□□□ -1.21
CBWD1-212ENST00000475411 ANKRD50Q9ULJ7 1429 aa7.51□□□□□ -1.21
CBWD1-212ENST00000475411 MPHOSPH9Q99550 1183 aa7.51□□□□□ -1.21
CBWD1-212ENST00000475411 PAK3O75914 559 aaPredicted RBP7.51□□□□□ -1.21
CBWD1-212ENST00000475411 GTF3C3Q9Y5Q9 886 aa7.51□□□□□ -1.21
CBWD1-212ENST00000475411 CHD1O14646 1710 aa7.5□□□□□ -1.21
CBWD1-212ENST00000475411 CSB-PGBD3P0DP91 1061 aa7.5□□□□□ -1.21
CBWD1-212ENST00000475411 KNSTRNQ9Y448 316 aa7.5□□□□□ -1.21
CBWD1-212ENST00000475411 CDK13Q14004 1512 aaKnown RBP7.5□□□□□ -1.21
CBWD1-212ENST00000475411 WDR43Q15061 677 aaKnown RBP eCLIP7.5□□□□□ -1.21
CBWD1-212ENST00000475411 PROSER2Q86WR7 435 aaPredicted RBP7.5□□□□□ -1.21
CBWD1-212ENST00000475411 NUDCQ9Y266 331 aa7.5□□□□□ -1.21
CBWD1-212ENST00000475411 ZNF518AQ6AHZ1 1483 aa7.5□□□□□ -1.21
CBWD1-212ENST00000475411 CNTLNQ9NXG0 1405 aa7.49□□□□□ -1.21
CBWD1-212ENST00000475411 ARAP1Q96P48 1450 aa7.49□□□□□ -1.21
CBWD1-212ENST00000475411 CANXP27824 592 aaKnown RBP7.49□□□□□ -1.21
CBWD1-212ENST00000475411 CFAP74Q9C0B2 1584 aa7.49□□□□□ -1.21
CBWD1-212ENST00000475411 PNNQ9H307 717 aaKnown RBP7.48□□□□□ -1.21
CBWD1-212ENST00000475411 TERF2IPQ9NYB0 399 aa7.48□□□□□ -1.21
CBWD1-212ENST00000475411 PLCH2O75038 1416 aa7.48□□□□□ -1.21
CBWD1-212ENST00000475411 BCL11AQ9H165 835 aa7.48□□□□□ -1.21
CBWD1-212ENST00000475411 SAFB2Q14151 953 aaKnown RBP eCLIP7.47□□□□□ -1.21
CBWD1-212ENST00000475411 ABCC10Q5T3U5 1492 aa7.47□□□□□ -1.21
CBWD1-212ENST00000475411 RRBP1Q9P2E9 1410 aaKnown RBP7.47□□□□□ -1.21
CBWD1-212ENST00000475411 UHRF1BP1LA0JNW5 1464 aa7.47□□□□□ -1.21
CBWD1-212ENST00000475411 NEO1Q92859 1461 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms