RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ABCC10Q5T3U5 1492 aa26.71■■□□□ 1.87
SEC61A2-213ENST00000475268 ABCC2Q92887 1545 aa26.71■■□□□ 1.87
SEC61A2-213ENST00000475268 SIN3AQ96ST3 1273 aa26.67■■□□□ 1.86
SEC61A2-213ENST00000475268 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
SEC61A2-213ENST00000475268 NEUROD1Q13562 356 aa26.65■■□□□ 1.86
SEC61A2-213ENST00000475268 ROCK1Q13464 1354 aa26.65■■□□□ 1.86
SEC61A2-213ENST00000475268 DIEXFQ68CQ4 756 aaKnown RBP26.64■■□□□ 1.85
SEC61A2-213ENST00000475268 KDM6BO15054 1643 aa26.62■■□□□ 1.85
SEC61A2-213ENST00000475268 TRIM52Q96A61 297 aa26.59■■□□□ 1.85
SEC61A2-213ENST00000475268 UHRF1BP1LA0JNW5 1464 aa26.57■■□□□ 1.84
SEC61A2-213ENST00000475268 ZCCHC11Q5TAX3 1644 aaKnown RBP26.53■■□□□ 1.84
SEC61A2-213ENST00000475268 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
SEC61A2-213ENST00000475268 CROCC2H7BZ55 1655 aa26.52■■□□□ 1.84
SEC61A2-213ENST00000475268 KDM5BQ9UGL1 1544 aa26.51■■□□□ 1.83
SEC61A2-213ENST00000475268 NCOA1Q15788 1441 aa26.5■■□□□ 1.83
SEC61A2-213ENST00000475268 KCNH8Q96L42 1107 aa26.5■■□□□ 1.83
SEC61A2-213ENST00000475268 TIMELESSQ9UNS1 1208 aa26.5■■□□□ 1.83
SEC61A2-213ENST00000475268 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
SEC61A2-213ENST00000475268 PREX2Q70Z35 1606 aa26.5■■□□□ 1.83
SEC61A2-213ENST00000475268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.5■■□□□ 1.83
SEC61A2-213ENST00000475268 TTC37Q6PGP7 1564 aa26.49■■□□□ 1.83
SEC61A2-213ENST00000475268 CDC42BPBQ9Y5S2 1711 aa26.48■■□□□ 1.83
SEC61A2-213ENST00000475268 ADGRL2O95490 1459 aa26.47■■□□□ 1.83
SEC61A2-213ENST00000475268 HNRNPMP52272 730 aaKnown RBP eCLIP26.46■■□□□ 1.83
SEC61A2-213ENST00000475268 MPHOSPH9Q99550 1183 aa26.46■■□□□ 1.83
SEC61A2-213ENST00000475268 ANKRD30AQ9BXX3 1397 aa26.46■■□□□ 1.83
SEC61A2-213ENST00000475268 ACIN1Q9UKV3 1341 aaKnown RBP26.46■■□□□ 1.83
SEC61A2-213ENST00000475268 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
SEC61A2-213ENST00000475268 SAMD9LQ8IVG5 1584 aa26.44■■□□□ 1.82
SEC61A2-213ENST00000475268 TSPY4P0CV99 314 aa26.43■■□□□ 1.82
SEC61A2-213ENST00000475268 TSPY10P0CW01 314 aa26.43■■□□□ 1.82
SEC61A2-213ENST00000475268 C9orf84Q5VXU9 1444 aa26.43■■□□□ 1.82
SEC61A2-213ENST00000475268 SHANK2Q9UPX8 1470 aa26.43■■□□□ 1.82
SEC61A2-213ENST00000475268 ARHGAP5Q13017 1502 aa26.42■■□□□ 1.82
SEC61A2-213ENST00000475268 TONSLQ96HA7 1378 aa26.41■■□□□ 1.82
SEC61A2-213ENST00000475268 MBD5Q9P267 1494 aa26.41■■□□□ 1.82
SEC61A2-213ENST00000475268 ARHGEF5Q12774 1597 aa26.4■■□□□ 1.82
SEC61A2-213ENST00000475268 MYO5CQ9NQX4 1742 aa26.39■■□□□ 1.82
SEC61A2-213ENST00000475268 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
SEC61A2-213ENST00000475268 CCDC141Q6ZP82 1450 aa26.35■■□□□ 1.81
SEC61A2-213ENST00000475268 FOXD1Q16676 465 aa26.35■■□□□ 1.81
SEC61A2-213ENST00000475268 RSPH4AQ5TD94 716 aa26.34■■□□□ 1.81
SEC61A2-213ENST00000475268 ANKRD50Q9ULJ7 1429 aa26.34■■□□□ 1.81
SEC61A2-213ENST00000475268 SLC4A1APQ9BWU0 796 aaKnown RBP26.34■■□□□ 1.81
SEC61A2-213ENST00000475268 SYCP2Q9BX26 1530 aa26.33■■□□□ 1.81
SEC61A2-213ENST00000475268 PLCH2O75038 1416 aa26.31■■□□□ 1.8
SEC61A2-213ENST00000475268 KIF15Q9NS87 1388 aa26.29■■□□□ 1.8
SEC61A2-213ENST00000475268 WDR7Q9Y4E6 1490 aa26.28■■□□□ 1.8
SEC61A2-213ENST00000475268 PLEKHH2Q8IVE3 1493 aa26.28■■□□□ 1.8
SEC61A2-213ENST00000475268 PZPP20742 1482 aa26.27■■□□□ 1.8
SEC61A2-213ENST00000475268 EFCAB2Q5VUJ9 269 aa26.27■■□□□ 1.8
SEC61A2-213ENST00000475268 KIAA1107Q9UPP5 1409 aa26.27■■□□□ 1.8
SEC61A2-213ENST00000475268 ANKRD30BQ9BXX2 1392 aa26.24■■□□□ 1.79
SEC61A2-213ENST00000475268 ARHGEF12Q9NZN5 1544 aa26.21■■□□□ 1.79
SEC61A2-213ENST00000475268 MAST1Q9Y2H9 1570 aa26.2■■□□□ 1.78
SEC61A2-213ENST00000475268 ASXL2Q76L83 1435 aa26.19■■□□□ 1.78
SEC61A2-213ENST00000475268 NUP155O75694 1391 aa26.19■■□□□ 1.78
SEC61A2-213ENST00000475268 NPM1P06748 294 aaKnown RBP eCLIP26.19■■□□□ 1.78
SEC61A2-213ENST00000475268 MIER1Q8N108 512 aa26.17■■□□□ 1.78
SEC61A2-213ENST00000475268 PKD2Q13563 968 aa26.16■■□□□ 1.78
SEC61A2-213ENST00000475268 ABCC1P33527 1531 aa26.16■■□□□ 1.78
SEC61A2-213ENST00000475268 ARAP3Q8WWN8 1544 aa26.15■■□□□ 1.78
SEC61A2-213ENST00000475268 RPRD2Q5VT52 1461 aaKnown RBP26.15■■□□□ 1.78
SEC61A2-213ENST00000475268 L3MBTL2Q969R5 705 aa26.12■■□□□ 1.77
SEC61A2-213ENST00000475268 ABCA9Q8IUA7 1624 aa26.12■■□□□ 1.77
SEC61A2-213ENST00000475268 TRAPPC8Q9Y2L5 1435 aa26.11■■□□□ 1.77
SEC61A2-213ENST00000475268 KDM5DQ9BY66 1539 aa26.1■■□□□ 1.77
SEC61A2-213ENST00000475268 PLXNC1O60486 1568 aa26.1■■□□□ 1.77
SEC61A2-213ENST00000475268 HIRIP3Q9BW71 556 aaPredicted RBP26.08■■□□□ 1.77
SEC61A2-213ENST00000475268 FANCAO15360 1455 aa26.08■■□□□ 1.76
SEC61A2-213ENST00000475268 AFAP1Q8N556 730 aa26.05■■□□□ 1.76
SEC61A2-213ENST00000475268 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
SEC61A2-213ENST00000475268 TEX14Q8IWB6 1497 aa26.03■■□□□ 1.76
SEC61A2-213ENST00000475268 SPAG9O60271 1321 aaKnown RBP26.03■■□□□ 1.76
SEC61A2-213ENST00000475268 FAM135AQ9P2D6 1515 aa26.01■■□□□ 1.75
SEC61A2-213ENST00000475268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26■■□□□ 1.75
SEC61A2-213ENST00000475268 UNC13BO14795 1591 aa25.99■■□□□ 1.75
SEC61A2-213ENST00000475268 ERBINQ96RT1 1412 aa25.98■■□□□ 1.75
SEC61A2-213ENST00000475268 ADGRL1O94910 1474 aa25.97■■□□□ 1.75
SEC61A2-213ENST00000475268 RTEL1-TNFRSF6BF6WH68 1400 aa25.96■■□□□ 1.75
SEC61A2-213ENST00000475268 SCAPERQ9BY12 1400 aa25.96■■□□□ 1.75
SEC61A2-213ENST00000475268 ZFYVE16Q7Z3T8 1539 aa25.95■■□□□ 1.74
SEC61A2-213ENST00000475268 DDX10Q13206 875 aaKnown RBP25.93■■□□□ 1.74
SEC61A2-213ENST00000475268 NBPF8Q3BBV2 869 aa25.93■■□□□ 1.74
SEC61A2-213ENST00000475268 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
SEC61A2-213ENST00000475268 CD109Q6YHK3 1445 aa25.92■■□□□ 1.74
SEC61A2-213ENST00000475268 MYT1LQ9UL68 1186 aa25.9■■□□□ 1.74
SEC61A2-213ENST00000475268 IQGAP3Q86VI3 1631 aa25.89■■□□□ 1.73
SEC61A2-213ENST00000475268 ATP7AQ04656 1500 aa25.88■■□□□ 1.73
SEC61A2-213ENST00000475268 MAGI2Q86UL8 1455 aa25.87■■□□□ 1.73
SEC61A2-213ENST00000475268 HSPA5P11021 654 aaKnown RBP25.87■■□□□ 1.73
SEC61A2-213ENST00000475268 INO80Q9ULG1 1556 aaPredicted RBP25.87■■□□□ 1.73
SEC61A2-213ENST00000475268 EIF4G2P78344 907 aaKnown RBP eCLIP25.86■■□□□ 1.73
SEC61A2-213ENST00000475268 YTHDC1Q96MU7 727 aaKnown RBP25.85■■□□□ 1.73
SEC61A2-213ENST00000475268 RIMBP3CA6NJZ7 1639 aa25.84■■□□□ 1.73
SEC61A2-213ENST00000475268 RIMBP3BA6NNM3 1639 aa25.84■■□□□ 1.73
SEC61A2-213ENST00000475268 RIMBP3Q9UFD9 1639 aa25.84■■□□□ 1.73
SEC61A2-213ENST00000475268 ZNF326Q5BKZ1 582 aaKnown RBP25.82■■□□□ 1.72
SEC61A2-213ENST00000475268 CFAP74Q9C0B2 1584 aa25.82■■□□□ 1.72
SEC61A2-213ENST00000475268 CCDC144AA2RUR9 1427 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms