RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 CDK13Q14004 1512 aaKnown RBP20.51■□□□□ 0.87
NELFCD-204ENST00000474543 DIP2BQ9P265 1576 aa20.5■□□□□ 0.87
NELFCD-204ENST00000474543 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
NELFCD-204ENST00000474543 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
NELFCD-204ENST00000474543 LRRIQ1Q96JM4 1722 aa20.46■□□□□ 0.87
NELFCD-204ENST00000474543 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
NELFCD-204ENST00000474543 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
NELFCD-204ENST00000474543 MTUS2Q5JR59 1369 aa20.43■□□□□ 0.86
NELFCD-204ENST00000474543 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
NELFCD-204ENST00000474543 HIRIP3Q9BW71 556 aaPredicted RBP20.43■□□□□ 0.86
NELFCD-204ENST00000474543 GLI2P10070 1586 aa20.42■□□□□ 0.86
NELFCD-204ENST00000474543 HFM1A2PYH4 1435 aa20.42■□□□□ 0.86
NELFCD-204ENST00000474543 PTPN23Q9H3S7 1636 aa20.4■□□□□ 0.86
NELFCD-204ENST00000474543 TSPOAP1O95153 1857 aa20.38■□□□□ 0.85
NELFCD-204ENST00000474543 NCOA2Q15596 1464 aa20.38■□□□□ 0.85
NELFCD-204ENST00000474543 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
NELFCD-204ENST00000474543 TSHZ2Q9NRE2 1034 aa20.37■□□□□ 0.85
NELFCD-204ENST00000474543 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
NELFCD-204ENST00000474543 MYOM3Q5VTT5 1437 aa20.37■□□□□ 0.85
NELFCD-204ENST00000474543 NAIPQ13075 1403 aa20.35■□□□□ 0.85
NELFCD-204ENST00000474543 SUPT6HQ7KZ85 1726 aaKnown RBP20.35■□□□□ 0.85
NELFCD-204ENST00000474543 TROQ12816 1431 aaPredicted RBP20.34■□□□□ 0.85
NELFCD-204ENST00000474543 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
NELFCD-204ENST00000474543 ANP32CO43423 234 aa20.34■□□□□ 0.85
NELFCD-204ENST00000474543 CD109Q6YHK3 1445 aa20.34■□□□□ 0.85
NELFCD-204ENST00000474543 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
NELFCD-204ENST00000474543 ABCA9Q8IUA7 1624 aa20.31■□□□□ 0.84
NELFCD-204ENST00000474543 MAGI3Q5TCQ9 1506 aa20.3■□□□□ 0.84
NELFCD-204ENST00000474543 FKBP8Q14318 412 aa20.29■□□□□ 0.84
NELFCD-204ENST00000474543 KIF14Q15058 1648 aa20.28■□□□□ 0.84
NELFCD-204ENST00000474543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.28■□□□□ 0.84
NELFCD-204ENST00000474543 PPRC1Q5VV67 1664 aaKnown RBP20.27■□□□□ 0.84
NELFCD-204ENST00000474543 BCANQ96GW7 911 aa20.26■□□□□ 0.83
NELFCD-204ENST00000474543 TEX14Q8IWB6 1497 aa20.26■□□□□ 0.83
NELFCD-204ENST00000474543 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
NELFCD-204ENST00000474543 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
NELFCD-204ENST00000474543 TCOF1Q13428 1488 aaKnown RBP20.21■□□□□ 0.83
NELFCD-204ENST00000474543 GCC2Q8IWJ2 1684 aa20.21■□□□□ 0.83
NELFCD-204ENST00000474543 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
NELFCD-204ENST00000474543 MYO5CQ9NQX4 1742 aa20.18■□□□□ 0.82
NELFCD-204ENST00000474543 PLCH2O75038 1416 aa20.17■□□□□ 0.82
NELFCD-204ENST00000474543 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
NELFCD-204ENST00000474543 NEFLP07196 543 aa20.17■□□□□ 0.82
NELFCD-204ENST00000474543 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
NELFCD-204ENST00000474543 FANCAO15360 1455 aa20.15■□□□□ 0.82
NELFCD-204ENST00000474543 KDM6BO15054 1643 aa20.15■□□□□ 0.82
NELFCD-204ENST00000474543 AKNAQ7Z591 1439 aa20.14■□□□□ 0.81
NELFCD-204ENST00000474543 EFCAB2Q5VUJ9 269 aa20.14■□□□□ 0.81
NELFCD-204ENST00000474543 NEO1Q92859 1461 aa20.13■□□□□ 0.81
NELFCD-204ENST00000474543 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
NELFCD-204ENST00000474543 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
NELFCD-204ENST00000474543 ARAP3Q8WWN8 1544 aa20.11■□□□□ 0.81
NELFCD-204ENST00000474543 CFAP74Q9C0B2 1584 aa20.11■□□□□ 0.81
NELFCD-204ENST00000474543 PREX2Q70Z35 1606 aa20.1■□□□□ 0.81
NELFCD-204ENST00000474543 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
NELFCD-204ENST00000474543 CDC42BPBQ9Y5S2 1711 aa20.1■□□□□ 0.81
NELFCD-204ENST00000474543 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
NELFCD-204ENST00000474543 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
NELFCD-204ENST00000474543 WASHC2AQ641Q2 1341 aa20.09■□□□□ 0.81
NELFCD-204ENST00000474543 COL17A1Q9UMD9 1497 aaPredicted RBP20.09■□□□□ 0.81
NELFCD-204ENST00000474543 CFDP1Q9UEE9 299 aaPredicted RBP20.09■□□□□ 0.81
NELFCD-204ENST00000474543 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.8
NELFCD-204ENST00000474543 MPHOSPH9Q99550 1183 aa20.06■□□□□ 0.8
NELFCD-204ENST00000474543 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
NELFCD-204ENST00000474543 RAPGEF3O95398 923 aa20.04■□□□□ 0.8
NELFCD-204ENST00000474543 ITSN2Q9NZM3 1697 aa20.04■□□□□ 0.8
NELFCD-204ENST00000474543 EIF4G2P78344 907 aaKnown RBP eCLIP20.03■□□□□ 0.8
NELFCD-204ENST00000474543 ANP32EQ9BTT0 268 aa20.03■□□□□ 0.8
NELFCD-204ENST00000474543 SCAPERQ9BY12 1400 aa20.03■□□□□ 0.8
NELFCD-204ENST00000474543 HNRNPUQ00839 825 aaKnown RBP eCLIP20.02■□□□□ 0.79
NELFCD-204ENST00000474543 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
NELFCD-204ENST00000474543 FOXD1Q16676 465 aa19.98■□□□□ 0.79
NELFCD-204ENST00000474543 CNTLNQ9NXG0 1405 aa19.98■□□□□ 0.79
NELFCD-204ENST00000474543 SAMD9LQ8IVG5 1584 aa19.98■□□□□ 0.79
NELFCD-204ENST00000474543 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
NELFCD-204ENST00000474543 ZNF644Q9H582 1327 aaPredicted RBP19.97■□□□□ 0.79
NELFCD-204ENST00000474543 ROCK1Q13464 1354 aa19.97■□□□□ 0.79
NELFCD-204ENST00000474543 DAPK1P53355 1430 aa19.97■□□□□ 0.79
NELFCD-204ENST00000474543 ABCC1P33527 1531 aa19.96■□□□□ 0.79
NELFCD-204ENST00000474543 ANKRD30BQ9BXX2 1392 aa19.96■□□□□ 0.79
NELFCD-204ENST00000474543 HNRNPMP52272 730 aaKnown RBP eCLIP19.95■□□□□ 0.78
NELFCD-204ENST00000474543 DNMT1P26358 1616 aaKnown RBP19.95■□□□□ 0.78
NELFCD-204ENST00000474543 C11orf95C9JLR9 678 aaPredicted RBP19.95■□□□□ 0.78
NELFCD-204ENST00000474543 RICTORQ6R327 1708 aa19.95■□□□□ 0.78
NELFCD-204ENST00000474543 NCOA1Q15788 1441 aa19.94■□□□□ 0.78
NELFCD-204ENST00000474543 POGZQ7Z3K3 1410 aa19.94■□□□□ 0.78
NELFCD-204ENST00000474543 PLEKHH2Q8IVE3 1493 aa19.94■□□□□ 0.78
NELFCD-204ENST00000474543 ARHGEF12Q9NZN5 1544 aa19.94■□□□□ 0.78
NELFCD-204ENST00000474543 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
NELFCD-204ENST00000474543 FRMPD1Q5SYB0 1578 aa19.94■□□□□ 0.78
NELFCD-204ENST00000474543 RPRD2Q5VT52 1461 aaKnown RBP19.94■□□□□ 0.78
NELFCD-204ENST00000474543 ABCC5O15440 1437 aa19.93■□□□□ 0.78
NELFCD-204ENST00000474543 CCDC7Q96M83 1385 aa19.93■□□□□ 0.78
NELFCD-204ENST00000474543 SYCP2Q9BX26 1530 aa19.92■□□□□ 0.78
NELFCD-204ENST00000474543 KIAA1107Q9UPP5 1409 aa19.92■□□□□ 0.78
NELFCD-204ENST00000474543 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
NELFCD-204ENST00000474543 ZNF518AQ6AHZ1 1483 aa19.91■□□□□ 0.78
NELFCD-204ENST00000474543 NBPF8Q3BBV2 869 aa19.91■□□□□ 0.78
NELFCD-204ENST00000474543 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
NELFCD-204ENST00000474543 TRAPPC8Q9Y2L5 1435 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms