RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 MLECQ14165 292 aa29.18■■■□□ 2.26
CUL4A-208ENST00000474116 FER1L4A9Z1Z3 1794 aa29.16■■■□□ 2.26
CUL4A-208ENST00000474116 ATP10AO60312 1499 aa29.12■■■□□ 2.25
CUL4A-208ENST00000474116 ARHGEF12Q9NZN5 1544 aa29.11■■■□□ 2.25
CUL4A-208ENST00000474116 CERKQ8TCT0 537 aa29.11■■■□□ 2.25
CUL4A-208ENST00000474116 EFCAB2Q5VUJ9 269 aa29.08■■■□□ 2.25
CUL4A-208ENST00000474116 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
CUL4A-208ENST00000474116 MYO5CQ9NQX4 1742 aa29.06■■■□□ 2.24
CUL4A-208ENST00000474116 FMN1Q68DA7 1419 aa29.03■■■□□ 2.24
CUL4A-208ENST00000474116 ATP1B4Q9UN42 357 aaPredicted RBP29.02■■■□□ 2.24
CUL4A-208ENST00000474116 PREX1Q8TCU6 1659 aa29.02■■■□□ 2.24
CUL4A-208ENST00000474116 CEBPAP49715 358 aaPredicted RBP29.01■■■□□ 2.23
CUL4A-208ENST00000474116 KIF14Q15058 1648 aa29.01■■■□□ 2.23
CUL4A-208ENST00000474116 CDK11AQ9UQ88 783 aaPredicted RBP29■■■□□ 2.23
CUL4A-208ENST00000474116 ARHGAP35Q9NRY4 1499 aa28.99■■■□□ 2.23
CUL4A-208ENST00000474116 ZNF518AQ6AHZ1 1483 aa28.97■■■□□ 2.23
CUL4A-208ENST00000474116 AFAP1Q8N556 730 aa28.97■■■□□ 2.23
CUL4A-208ENST00000474116 KDM5CP41229 1560 aa28.96■■■□□ 2.23
CUL4A-208ENST00000474116 UBTFP17480 764 aaKnown RBP28.96■■■□□ 2.23
CUL4A-208ENST00000474116 TROQ12816 1431 aaPredicted RBP28.94■■■□□ 2.22
CUL4A-208ENST00000474116 ARHGAP5Q13017 1502 aa28.93■■■□□ 2.22
CUL4A-208ENST00000474116 STRCQ7RTU9 1775 aa28.93■■■□□ 2.22
CUL4A-208ENST00000474116 EHMT2Q96KQ7 1210 aa28.92■■■□□ 2.22
CUL4A-208ENST00000474116 DIP2CQ9Y2E4 1556 aa28.89■■■□□ 2.22
CUL4A-208ENST00000474116 REREQ9P2R6 1566 aa28.88■■■□□ 2.21
CUL4A-208ENST00000474116 DMRT2Q9Y5R5 561 aa28.88■■■□□ 2.21
CUL4A-208ENST00000474116 LRRIQ1Q96JM4 1722 aa28.88■■■□□ 2.21
CUL4A-208ENST00000474116 CLIP1P30622 1438 aa28.86■■■□□ 2.21
CUL4A-208ENST00000474116 UHRF1BP1Q6BDS2 1440 aa28.86■■■□□ 2.21
CUL4A-208ENST00000474116 SETD1BQ9UPS6 1966 aaKnown RBP28.86■■■□□ 2.21
CUL4A-208ENST00000474116 MLH3Q9UHC1 1453 aa28.85■■■□□ 2.21
CUL4A-208ENST00000474116 CDC42BPBQ9Y5S2 1711 aa28.85■■■□□ 2.21
CUL4A-208ENST00000474116 MYT1LQ9UL68 1186 aa28.83■■■□□ 2.21
CUL4A-208ENST00000474116 ABCA6Q8N139 1617 aa28.83■■■□□ 2.21
CUL4A-208ENST00000474116 C3P01024 1663 aa28.8■■■□□ 2.2
CUL4A-208ENST00000474116 AGLP35573 1532 aa28.79■■■□□ 2.2
CUL4A-208ENST00000474116 TRAPPC8Q9Y2L5 1435 aa28.78■■■□□ 2.2
CUL4A-208ENST00000474116 PTPRTO14522 1441 aa28.77■■■□□ 2.2
CUL4A-208ENST00000474116 PREX2Q70Z35 1606 aa28.76■■■□□ 2.2
CUL4A-208ENST00000474116 ABCC1P33527 1531 aa28.76■■■□□ 2.19
CUL4A-208ENST00000474116 ITSN2Q9NZM3 1697 aa28.73■■■□□ 2.19
CUL4A-208ENST00000474116 KIDINS220Q9ULH0 1771 aa28.7■■■□□ 2.19
CUL4A-208ENST00000474116 CASKIN1Q8WXD9 1431 aa28.69■■■□□ 2.18
CUL4A-208ENST00000474116 ILDR2Q71H61 639 aa28.69■■■□□ 2.18
CUL4A-208ENST00000474116 ESF1Q9H501 851 aaKnown RBP28.69■■■□□ 2.18
CUL4A-208ENST00000474116 CCDC18Q5T9S5 1454 aa28.68■■■□□ 2.18
CUL4A-208ENST00000474116 DISP3Q9P2K9 1392 aa28.68■■■□□ 2.18
CUL4A-208ENST00000474116 CNTLNQ9NXG0 1405 aa28.66■■■□□ 2.18
CUL4A-208ENST00000474116 CDC42BPAQ5VT25 1732 aa28.66■■■□□ 2.18
CUL4A-208ENST00000474116 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
CUL4A-208ENST00000474116 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
CUL4A-208ENST00000474116 NCOA1Q15788 1441 aa28.63■■■□□ 2.17
CUL4A-208ENST00000474116 SAMD9LQ8IVG5 1584 aa28.6■■■□□ 2.17
CUL4A-208ENST00000474116 NPATQ14207 1427 aa28.58■■■□□ 2.17
CUL4A-208ENST00000474116 SOCS7O14512 581 aa28.57■■■□□ 2.16
CUL4A-208ENST00000474116 IQSEC2Q5JU85 1478 aa28.57■■■□□ 2.16
CUL4A-208ENST00000474116 MROH2AA6NES4 1674 aa28.57■■■□□ 2.16
CUL4A-208ENST00000474116 ZMYM3Q14202 1370 aa28.55■■■□□ 2.16
CUL4A-208ENST00000474116 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
CUL4A-208ENST00000474116 CAMSAP1Q5T5Y3 1602 aa28.54■■■□□ 2.16
CUL4A-208ENST00000474116 GPATCH8Q9UKJ3 1502 aaKnown RBP28.53■■■□□ 2.16
CUL4A-208ENST00000474116 FYCO1Q9BQS8 1478 aa28.53■■■□□ 2.16
CUL4A-208ENST00000474116 SPAG9O60271 1321 aaKnown RBP28.52■■■□□ 2.16
CUL4A-208ENST00000474116 HNRNPMP52272 730 aaKnown RBP eCLIP28.52■■■□□ 2.161e-8■■■■■ 91.7
CUL4A-208ENST00000474116 SYCP2Q9BX26 1530 aa28.52■■■□□ 2.16
CUL4A-208ENST00000474116 SUPT6HQ7KZ85 1726 aaKnown RBP28.49■■■□□ 2.15
CUL4A-208ENST00000474116 SPATA31D1Q6ZQQ2 1576 aa28.49■■■□□ 2.15
CUL4A-208ENST00000474116 NCKAP5LQ9HCH0 1330 aa28.46■■■□□ 2.15
CUL4A-208ENST00000474116 KIAA1107Q9UPP5 1409 aa28.46■■■□□ 2.15
CUL4A-208ENST00000474116 PLXNC1O60486 1568 aa28.45■■■□□ 2.15
CUL4A-208ENST00000474116 ATP7AQ04656 1500 aa28.45■■■□□ 2.15
CUL4A-208ENST00000474116 CLTCQ00610 1675 aaKnown RBP28.45■■■□□ 2.14
CUL4A-208ENST00000474116 INO80Q9ULG1 1556 aaPredicted RBP28.43■■■□□ 2.14
CUL4A-208ENST00000474116 A2MP01023 1474 aa28.42■■■□□ 2.14
CUL4A-208ENST00000474116 CFDP1Q9UEE9 299 aaPredicted RBP28.41■■■□□ 2.14
CUL4A-208ENST00000474116 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
CUL4A-208ENST00000474116 ZNF335Q9H4Z2 1342 aaPredicted RBP28.41■■■□□ 2.14
CUL4A-208ENST00000474116 PLEKHH2Q8IVE3 1493 aa28.4■■■□□ 2.14
CUL4A-208ENST00000474116 ZNF142P52746 1687 aaPredicted RBP28.4■■■□□ 2.14
CUL4A-208ENST00000474116 PLA2R1Q13018 1463 aa28.4■■■□□ 2.14
CUL4A-208ENST00000474116 MYO3AQ8NEV4 1616 aa28.4■■■□□ 2.14
CUL4A-208ENST00000474116 PKD2Q13563 968 aa28.38■■■□□ 2.13
CUL4A-208ENST00000474116 CEP170BQ9Y4F5 1589 aaPredicted RBP28.37■■■□□ 2.13
CUL4A-208ENST00000474116 TCOF1Q13428 1488 aaKnown RBP28.36■■■□□ 2.13
CUL4A-208ENST00000474116 GGT6Q6P531 493 aa28.36■■■□□ 2.13
CUL4A-208ENST00000474116 CCNB3Q8WWL7 1395 aa28.36■■■□□ 2.13
CUL4A-208ENST00000474116 PPP6R1Q9UPN7 881 aa28.34■■■□□ 2.13
CUL4A-208ENST00000474116 UBAP1LF5GYI3 381 aa28.32■■■□□ 2.12
CUL4A-208ENST00000474116 ADGBQ8N7X0 1667 aa28.3■■■□□ 2.12
CUL4A-208ENST00000474116 ZNF644Q9H582 1327 aaPredicted RBP28.28■■■□□ 2.12
CUL4A-208ENST00000474116 MBD5Q9P267 1494 aa28.27■■■□□ 2.12
CUL4A-208ENST00000474116 MTUS2Q5JR59 1369 aa28.26■■■□□ 2.12
CUL4A-208ENST00000474116 A2ML1A8K2U0 1454 aa28.24■■■□□ 2.11
CUL4A-208ENST00000474116 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
CUL4A-208ENST00000474116 DNMT1P26358 1616 aaKnown RBP28.23■■■□□ 2.11
CUL4A-208ENST00000474116 RTEL1-TNFRSF6BF6WH68 1400 aa28.22■■■□□ 2.11
CUL4A-208ENST00000474116 DHX29Q7Z478 1369 aaKnown RBP28.21■■■□□ 2.11
CUL4A-208ENST00000474116 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
CUL4A-208ENST00000474116 EHBP1L1Q8N3D4 1523 aa28.14■■■□□ 2.1
CUL4A-208ENST00000474116 CEP162Q5TB80 1403 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms