RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ABCC5O15440 1437 aa26.56■■□□□ 1.84
VARS2-206ENST00000473916 ZNF777Q9ULD5 760 aaPredicted RBP26.55■■□□□ 1.84
VARS2-206ENST00000473916 KDM6BO15054 1643 aa26.55■■□□□ 1.84
VARS2-206ENST00000473916 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
VARS2-206ENST00000473916 UHRF1BP1LA0JNW5 1464 aa26.53■■□□□ 1.84
VARS2-206ENST00000473916 TTC37Q6PGP7 1564 aa26.51■■□□□ 1.84
VARS2-206ENST00000473916 CDC42BPBQ9Y5S2 1711 aa26.5■■□□□ 1.83
VARS2-206ENST00000473916 KDM5BQ9UGL1 1544 aa26.49■■□□□ 1.83
VARS2-206ENST00000473916 AKNAQ7Z591 1439 aa26.48■■□□□ 1.83
VARS2-206ENST00000473916 CROCC2H7BZ55 1655 aa26.47■■□□□ 1.83
VARS2-206ENST00000473916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.83
VARS2-206ENST00000473916 PREX2Q70Z35 1606 aa26.46■■□□□ 1.83
VARS2-206ENST00000473916 KCNH8Q96L42 1107 aa26.42■■□□□ 1.82
VARS2-206ENST00000473916 ROCK1Q13464 1354 aa26.41■■□□□ 1.82
VARS2-206ENST00000473916 ADGBQ8N7X0 1667 aa26.41■■□□□ 1.82
VARS2-206ENST00000473916 SAMD9LQ8IVG5 1584 aa26.4■■□□□ 1.82
VARS2-206ENST00000473916 MYO5CQ9NQX4 1742 aa26.38■■□□□ 1.81
VARS2-206ENST00000473916 SIN3AQ96ST3 1273 aa26.38■■□□□ 1.81
VARS2-206ENST00000473916 ARHGAP5Q13017 1502 aa26.34■■□□□ 1.81
VARS2-206ENST00000473916 HNRNPMP52272 730 aaKnown RBP eCLIP26.32■■□□□ 1.8
VARS2-206ENST00000473916 NCOA1Q15788 1441 aa26.32■■□□□ 1.8
VARS2-206ENST00000473916 NEUROD1Q13562 356 aa26.31■■□□□ 1.8
VARS2-206ENST00000473916 DENND4BO75064 1496 aaPredicted RBP26.31■■□□□ 1.8
VARS2-206ENST00000473916 ADGRL2O95490 1459 aa26.31■■□□□ 1.8
VARS2-206ENST00000473916 MBD5Q9P267 1494 aa26.31■■□□□ 1.8
VARS2-206ENST00000473916 TRIM52Q96A61 297 aa26.29■■□□□ 1.8
VARS2-206ENST00000473916 ARHGEF5Q12774 1597 aa26.29■■□□□ 1.8
VARS2-206ENST00000473916 SYCP2Q9BX26 1530 aa26.28■■□□□ 1.8
VARS2-206ENST00000473916 C9orf84Q5VXU9 1444 aa26.27■■□□□ 1.8
VARS2-206ENST00000473916 SHANK2Q9UPX8 1470 aa26.27■■□□□ 1.8
VARS2-206ENST00000473916 WDR7Q9Y4E6 1490 aa26.26■■□□□ 1.79
VARS2-206ENST00000473916 ANKRD30AQ9BXX3 1397 aa26.23■■□□□ 1.79
VARS2-206ENST00000473916 ZNF316A6NFI3 1004 aaPredicted RBP26.22■■□□□ 1.79
VARS2-206ENST00000473916 CCDC141Q6ZP82 1450 aa26.22■■□□□ 1.79
VARS2-206ENST00000473916 PLCH2O75038 1416 aa26.22■■□□□ 1.79
VARS2-206ENST00000473916 ASXL2Q76L83 1435 aa26.2■■□□□ 1.78
VARS2-206ENST00000473916 ARHGEF12Q9NZN5 1544 aa26.19■■□□□ 1.78
VARS2-206ENST00000473916 MPHOSPH9Q99550 1183 aa26.19■■□□□ 1.78
VARS2-206ENST00000473916 TSPY4P0CV99 314 aa26.17■■□□□ 1.78
VARS2-206ENST00000473916 TSPY10P0CW01 314 aa26.17■■□□□ 1.78
VARS2-206ENST00000473916 FOXD1Q16676 465 aa26.16■■□□□ 1.78
VARS2-206ENST00000473916 ANKRD50Q9ULJ7 1429 aa26.15■■□□□ 1.78
VARS2-206ENST00000473916 ABCA9Q8IUA7 1624 aa26.14■■□□□ 1.77
VARS2-206ENST00000473916 ABCC1P33527 1531 aa26.13■■□□□ 1.77
VARS2-206ENST00000473916 KIF15Q9NS87 1388 aa26.12■■□□□ 1.77
VARS2-206ENST00000473916 PZPP20742 1482 aa26.12■■□□□ 1.77
VARS2-206ENST00000473916 KIAA1107Q9UPP5 1409 aa26.12■■□□□ 1.77
VARS2-206ENST00000473916 PLEKHH2Q8IVE3 1493 aa26.11■■□□□ 1.77
VARS2-206ENST00000473916 EFCAB2Q5VUJ9 269 aa26.1■■□□□ 1.77
VARS2-206ENST00000473916 MAST1Q9Y2H9 1570 aa26.1■■□□□ 1.77
VARS2-206ENST00000473916 ARAP3Q8WWN8 1544 aa26.07■■□□□ 1.76
VARS2-206ENST00000473916 DIEXFQ68CQ4 756 aaKnown RBP26.07■■□□□ 1.76
VARS2-206ENST00000473916 RSPH4AQ5TD94 716 aa26.07■■□□□ 1.76
VARS2-206ENST00000473916 SLC4A1APQ9BWU0 796 aaKnown RBP26.06■■□□□ 1.76
VARS2-206ENST00000473916 TRAPPC8Q9Y2L5 1435 aa26.06■■□□□ 1.76
VARS2-206ENST00000473916 NPM1P06748 294 aaKnown RBP eCLIP26.05■■□□□ 1.76
VARS2-206ENST00000473916 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
VARS2-206ENST00000473916 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
VARS2-206ENST00000473916 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
VARS2-206ENST00000473916 TONSLQ96HA7 1378 aa26.05■■□□□ 1.76
VARS2-206ENST00000473916 TIMELESSQ9UNS1 1208 aa26.03■■□□□ 1.76
VARS2-206ENST00000473916 FANCAO15360 1455 aa26.02■■□□□ 1.76
VARS2-206ENST00000473916 PLXNC1O60486 1568 aa26.02■■□□□ 1.76
VARS2-206ENST00000473916 ANKRD30BQ9BXX2 1392 aa26■■□□□ 1.75
VARS2-206ENST00000473916 PPP1R15AO75807 674 aaPredicted RBP26■■□□□ 1.75
VARS2-206ENST00000473916 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
VARS2-206ENST00000473916 CYB5RLQ6IPT4 315 aa25.98■■□□□ 1.75
VARS2-206ENST00000473916 NUP155O75694 1391 aa25.96■■□□□ 1.75
VARS2-206ENST00000473916 AFAP1Q8N556 730 aa25.95■■□□□ 1.75
VARS2-206ENST00000473916 KDM5DQ9BY66 1539 aa25.95■■□□□ 1.74
VARS2-206ENST00000473916 PKD2Q13563 968 aa25.92■■□□□ 1.74
VARS2-206ENST00000473916 ADGRL1O94910 1474 aa25.92■■□□□ 1.74
VARS2-206ENST00000473916 ZFYVE16Q7Z3T8 1539 aa25.92■■□□□ 1.74
VARS2-206ENST00000473916 RPRD2Q5VT52 1461 aaKnown RBP25.9■■□□□ 1.74
VARS2-206ENST00000473916 DUOX2Q9NRD8 1548 aa25.89■■□□□ 1.74
VARS2-206ENST00000473916 UNC13BO14795 1591 aa25.89■■□□□ 1.73
VARS2-206ENST00000473916 SCAPERQ9BY12 1400 aa25.88■■□□□ 1.73
VARS2-206ENST00000473916 SPAG9O60271 1321 aaKnown RBP25.88■■□□□ 1.73
VARS2-206ENST00000473916 CD109Q6YHK3 1445 aa25.87■■□□□ 1.73
VARS2-206ENST00000473916 FAM135AQ9P2D6 1515 aa25.87■■□□□ 1.73
VARS2-206ENST00000473916 INO80Q9ULG1 1556 aaPredicted RBP25.86■■□□□ 1.73
VARS2-206ENST00000473916 TEX14Q8IWB6 1497 aa25.84■■□□□ 1.73
VARS2-206ENST00000473916 L3MBTL2Q969R5 705 aa25.83■■□□□ 1.73
VARS2-206ENST00000473916 ATP7AQ04656 1500 aa25.83■■□□□ 1.73
VARS2-206ENST00000473916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.82■■□□□ 1.72
VARS2-206ENST00000473916 ERBINQ96RT1 1412 aa25.82■■□□□ 1.72
VARS2-206ENST00000473916 RTEL1-TNFRSF6BF6WH68 1400 aa25.81■■□□□ 1.72
VARS2-206ENST00000473916 HIRIP3Q9BW71 556 aaPredicted RBP25.79■■□□□ 1.72
VARS2-206ENST00000473916 IQGAP3Q86VI3 1631 aa25.79■■□□□ 1.72
VARS2-206ENST00000473916 CFAP74Q9C0B2 1584 aa25.78■■□□□ 1.72
VARS2-206ENST00000473916 MAGI2Q86UL8 1455 aa25.77■■□□□ 1.72
VARS2-206ENST00000473916 KIDINS220Q9ULH0 1771 aa25.76■■□□□ 1.71
VARS2-206ENST00000473916 MAP3K4Q9Y6R4 1608 aa25.74■■□□□ 1.71
VARS2-206ENST00000473916 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
VARS2-206ENST00000473916 ZNF518AQ6AHZ1 1483 aa25.72■■□□□ 1.71
VARS2-206ENST00000473916 POGZQ7Z3K3 1410 aa25.7■■□□□ 1.7
VARS2-206ENST00000473916 MIER1Q8N108 512 aa25.7■■□□□ 1.7
VARS2-206ENST00000473916 NBPF8Q3BBV2 869 aa25.69■■□□□ 1.7
VARS2-206ENST00000473916 KDM5CP41229 1560 aa25.68■■□□□ 1.7
VARS2-206ENST00000473916 DEPDC5O75140 1603 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms