RNA–Protein interactions for RNA: ENST00000473562.1

NOTCH4-203, Transcript of notch 4, humanhuman

TSL 1 (best)

Gene NOTCH4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-203ENST00000473562 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
NOTCH4-203ENST00000473562 CTTNBP2Q8WZ74 1663 aa17.95■□□□□ 0.46
NOTCH4-203ENST00000473562 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
NOTCH4-203ENST00000473562 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
NOTCH4-203ENST00000473562 NOP58Q9Y2X3 529 aaKnown RBP17.93■□□□□ 0.46
NOTCH4-203ENST00000473562 SKAP1Q86WV1 359 aa17.92■□□□□ 0.46
NOTCH4-203ENST00000473562 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
NOTCH4-203ENST00000473562 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
NOTCH4-203ENST00000473562 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
NOTCH4-203ENST00000473562 SUPT6HQ7KZ85 1726 aaKnown RBP17.91■□□□□ 0.46
NOTCH4-203ENST00000473562 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
NOTCH4-203ENST00000473562 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
NOTCH4-203ENST00000473562 ANKRD30BQ9BXX2 1392 aa17.86■□□□□ 0.45
NOTCH4-203ENST00000473562 EHBP1L1Q8N3D4 1523 aa17.85■□□□□ 0.45
NOTCH4-203ENST00000473562 CUL7Q14999 1698 aa17.84■□□□□ 0.45
NOTCH4-203ENST00000473562 PKD2Q13563 968 aa17.84■□□□□ 0.45
NOTCH4-203ENST00000473562 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
NOTCH4-203ENST00000473562 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
NOTCH4-203ENST00000473562 NUDCQ9Y266 331 aa17.83■□□□□ 0.45
NOTCH4-203ENST00000473562 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
NOTCH4-203ENST00000473562 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
NOTCH4-203ENST00000473562 RTN4Q9NQC3 1192 aaKnown RBP17.82■□□□□ 0.44
NOTCH4-203ENST00000473562 SAMD9Q5K651 1589 aa17.81■□□□□ 0.44
NOTCH4-203ENST00000473562 USP47Q96K76 1375 aa17.81■□□□□ 0.44
NOTCH4-203ENST00000473562 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
NOTCH4-203ENST00000473562 ANP32AP39687 249 aaKnown RBP17.8■□□□□ 0.44
NOTCH4-203ENST00000473562 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
NOTCH4-203ENST00000473562 PLIN1O60240 522 aa17.79■□□□□ 0.44
NOTCH4-203ENST00000473562 FBLN2P98095 1184 aa17.78■□□□□ 0.44
NOTCH4-203ENST00000473562 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
NOTCH4-203ENST00000473562 DHX29Q7Z478 1369 aaKnown RBP17.78■□□□□ 0.44
NOTCH4-203ENST00000473562 RPRD2Q5VT52 1461 aaKnown RBP17.78■□□□□ 0.44
NOTCH4-203ENST00000473562 TEX14Q8IWB6 1497 aa17.77■□□□□ 0.44
NOTCH4-203ENST00000473562 ST20-MTHFSA0A0A6YYL1 179 aa17.77■□□□□ 0.44
NOTCH4-203ENST00000473562 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
NOTCH4-203ENST00000473562 ZBTB47Q9UFB7 747 aaPredicted RBP17.77■□□□□ 0.44
NOTCH4-203ENST00000473562 ABCC5O15440 1437 aa17.77■□□□□ 0.44
NOTCH4-203ENST00000473562 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
NOTCH4-203ENST00000473562 DAPK1P53355 1430 aa17.77■□□□□ 0.43
NOTCH4-203ENST00000473562 SPATA31E1Q6ZUB1 1445 aa17.77■□□□□ 0.43
NOTCH4-203ENST00000473562 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
NOTCH4-203ENST00000473562 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
NOTCH4-203ENST00000473562 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
NOTCH4-203ENST00000473562 RGL3Q3MIN7 710 aa17.74■□□□□ 0.43
NOTCH4-203ENST00000473562 IPO9Q96P70 1041 aaKnown RBP17.74■□□□□ 0.43
NOTCH4-203ENST00000473562 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
NOTCH4-203ENST00000473562 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
NOTCH4-203ENST00000473562 GCC2Q8IWJ2 1684 aa17.73■□□□□ 0.43
NOTCH4-203ENST00000473562 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
NOTCH4-203ENST00000473562 SMG6Q86US8 1419 aaKnown RBP17.72■□□□□ 0.43
NOTCH4-203ENST00000473562 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
NOTCH4-203ENST00000473562 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
NOTCH4-203ENST00000473562 BCORL1Q5H9F3 1711 aa17.71■□□□□ 0.43
NOTCH4-203ENST00000473562 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
NOTCH4-203ENST00000473562 IL27Q8NEV9 243 aa17.69■□□□□ 0.42
NOTCH4-203ENST00000473562 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
NOTCH4-203ENST00000473562 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
NOTCH4-203ENST00000473562 PZPP20742 1482 aa17.65■□□□□ 0.42
NOTCH4-203ENST00000473562 MIA2Q96PC5 1412 aa17.65■□□□□ 0.42
NOTCH4-203ENST00000473562 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
NOTCH4-203ENST00000473562 NUP155O75694 1391 aa17.64■□□□□ 0.42
NOTCH4-203ENST00000473562 RCAN3Q9UKA8 241 aa17.64■□□□□ 0.41
NOTCH4-203ENST00000473562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
NOTCH4-203ENST00000473562 IQGAP2Q13576 1575 aa17.63■□□□□ 0.41
NOTCH4-203ENST00000473562 NBPF1Q3BBV0 1214 aa17.63■□□□□ 0.41
NOTCH4-203ENST00000473562 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
NOTCH4-203ENST00000473562 NEFMP07197 916 aa17.61■□□□□ 0.41
NOTCH4-203ENST00000473562 HNRNPMP52272 730 aaKnown RBP eCLIP17.61■□□□□ 0.41
NOTCH4-203ENST00000473562 PDE4AP27815 886 aa17.61■□□□□ 0.41
NOTCH4-203ENST00000473562 WDR62O43379 1518 aa17.61■□□□□ 0.41
NOTCH4-203ENST00000473562 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
NOTCH4-203ENST00000473562 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
NOTCH4-203ENST00000473562 C20orf194Q5TEA3 1177 aa17.59■□□□□ 0.41
NOTCH4-203ENST00000473562 NUP153P49790 1475 aaKnown RBP17.58■□□□□ 0.41
NOTCH4-203ENST00000473562 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
NOTCH4-203ENST00000473562 PLB1Q6P1J6 1458 aa17.57■□□□□ 0.4
NOTCH4-203ENST00000473562 KIAA1107Q9UPP5 1409 aa17.57■□□□□ 0.4
NOTCH4-203ENST00000473562 ROCK1Q13464 1354 aa17.57■□□□□ 0.4
NOTCH4-203ENST00000473562 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
NOTCH4-203ENST00000473562 MYBBP1AQ9BQG0 1328 aaKnown RBP17.56■□□□□ 0.4
NOTCH4-203ENST00000473562 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
NOTCH4-203ENST00000473562 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
NOTCH4-203ENST00000473562 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
NOTCH4-203ENST00000473562 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
NOTCH4-203ENST00000473562 ANKRD50Q9ULJ7 1429 aa17.53■□□□□ 0.4
NOTCH4-203ENST00000473562 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
NOTCH4-203ENST00000473562 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
NOTCH4-203ENST00000473562 MYT1LQ9UL68 1186 aa17.51■□□□□ 0.39
NOTCH4-203ENST00000473562 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
NOTCH4-203ENST00000473562 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
NOTCH4-203ENST00000473562 BACH2Q9BYV9 841 aa17.49■□□□□ 0.39
NOTCH4-203ENST00000473562 KDM5CP41229 1560 aa17.49■□□□□ 0.39
NOTCH4-203ENST00000473562 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
NOTCH4-203ENST00000473562 KIF14Q15058 1648 aa17.49■□□□□ 0.39
NOTCH4-203ENST00000473562 TSPY4P0CV99 314 aa17.49■□□□□ 0.39
NOTCH4-203ENST00000473562 TSPY10P0CW01 314 aa17.49■□□□□ 0.39
NOTCH4-203ENST00000473562 PANK3Q9H999 370 aa17.49■□□□□ 0.39
NOTCH4-203ENST00000473562 MBD5Q9P267 1494 aa17.48■□□□□ 0.39
NOTCH4-203ENST00000473562 GPATCH8Q9UKJ3 1502 aaKnown RBP17.48■□□□□ 0.39
NOTCH4-203ENST00000473562 NLRP13Q86W25 1043 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms