RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 CNTLNQ9NXG0 1405 aa19.3■□□□□ 0.68
ABCF3-210ENST00000473311 ERICH6BQ5W0A0 696 aa19.3■□□□□ 0.68
ABCF3-210ENST00000473311 IRX6P78412 446 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-210ENST00000473311 DAPK1P53355 1430 aa19.27■□□□□ 0.68
ABCF3-210ENST00000473311 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-210ENST00000473311 CCDC7Q96M83 1385 aa19.25■□□□□ 0.67
ABCF3-210ENST00000473311 CCDC184Q52MB2 194 aa19.24■□□□□ 0.67
ABCF3-210ENST00000473311 NCOA1Q15788 1441 aa19.24■□□□□ 0.67
ABCF3-210ENST00000473311 ROCK1Q13464 1354 aa19.24■□□□□ 0.67
ABCF3-210ENST00000473311 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
ABCF3-210ENST00000473311 RPRD2Q5VT52 1461 aaKnown RBP19.23■□□□□ 0.67
ABCF3-210ENST00000473311 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
ABCF3-210ENST00000473311 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-210ENST00000473311 DNMT1P26358 1616 aaKnown RBP19.23■□□□□ 0.67
ABCF3-210ENST00000473311 NBPF8Q3BBV2 869 aa19.22■□□□□ 0.67
ABCF3-210ENST00000473311 PRKRIP1Q9H875 184 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-210ENST00000473311 ABCC5O15440 1437 aa19.22■□□□□ 0.67
ABCF3-210ENST00000473311 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
ABCF3-210ENST00000473311 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
ABCF3-210ENST00000473311 FAM9BQ8IZU0 186 aa19.2■□□□□ 0.66
ABCF3-210ENST00000473311 TEX14Q8IWB6 1497 aa19.19■□□□□ 0.66
ABCF3-210ENST00000473311 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
ABCF3-210ENST00000473311 KIAA0556O60303 1618 aa19.19■□□□□ 0.66
ABCF3-210ENST00000473311 NUP153P49790 1475 aaKnown RBP19.18■□□□□ 0.66
ABCF3-210ENST00000473311 CDK11AQ9UQ88 783 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-210ENST00000473311 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
ABCF3-210ENST00000473311 KIAA0586Q9BVV6 1533 aa19.17■□□□□ 0.66
ABCF3-210ENST00000473311 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
ABCF3-210ENST00000473311 RAPGEF6Q8TEU7 1601 aa19.15■□□□□ 0.66
ABCF3-210ENST00000473311 KIF7Q2M1P5 1343 aa19.15■□□□□ 0.66
ABCF3-210ENST00000473311 UBE2Q2Q8WVN8 375 aa19.15■□□□□ 0.66
ABCF3-210ENST00000473311 SPATA31E1Q6ZUB1 1445 aa19.12■□□□□ 0.65
ABCF3-210ENST00000473311 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
ABCF3-210ENST00000473311 POLR1AO95602 1720 aaPredicted RBP19.12■□□□□ 0.65
ABCF3-210ENST00000473311 MSH5O43196 834 aa19.1■□□□□ 0.65
ABCF3-210ENST00000473311 ZBED9Q6R2W3 1325 aa19.1■□□□□ 0.65
ABCF3-210ENST00000473311 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
ABCF3-210ENST00000473311 CFDP1Q9UEE9 299 aaPredicted RBP19.1■□□□□ 0.65
ABCF3-210ENST00000473311 PRG4Q92954 1404 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-210ENST00000473311 PPP4R2Q9NY27 417 aa19.09■□□□□ 0.65
ABCF3-210ENST00000473311 PZPP20742 1482 aa19.09■□□□□ 0.65
ABCF3-210ENST00000473311 CAMSAP2Q08AD1 1489 aa19.09■□□□□ 0.65
ABCF3-210ENST00000473311 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.65
ABCF3-210ENST00000473311 GRIN2AQ12879 1464 aa19.08■□□□□ 0.64
ABCF3-210ENST00000473311 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-210ENST00000473311 ZNF326Q5BKZ1 582 aaKnown RBP19.06■□□□□ 0.64
ABCF3-210ENST00000473311 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-210ENST00000473311 POLR3GLQ9BT43 218 aa19.06■□□□□ 0.64
ABCF3-210ENST00000473311 ITSN2Q9NZM3 1697 aa19.06■□□□□ 0.64
ABCF3-210ENST00000473311 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
ABCF3-210ENST00000473311 SALL2Q9Y467 1007 aaPredicted RBP19.05■□□□□ 0.64
ABCF3-210ENST00000473311 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.64
ABCF3-210ENST00000473311 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
ABCF3-210ENST00000473311 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
ABCF3-210ENST00000473311 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.64
ABCF3-210ENST00000473311 PKD2Q13563 968 aa19.01■□□□□ 0.63
ABCF3-210ENST00000473311 KIF14Q15058 1648 aa19.01■□□□□ 0.63
ABCF3-210ENST00000473311 USP47Q96K76 1375 aa19.01■□□□□ 0.63
ABCF3-210ENST00000473311 B4GALNT3Q6L9W6 998 aa19■□□□□ 0.63
ABCF3-210ENST00000473311 MBD5Q9P267 1494 aa19■□□□□ 0.63
ABCF3-210ENST00000473311 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
ABCF3-210ENST00000473311 CROCC2H7BZ55 1655 aa18.98■□□□□ 0.63
ABCF3-210ENST00000473311 ADGRL2O95490 1459 aa18.98■□□□□ 0.63
ABCF3-210ENST00000473311 BCORL1Q5H9F3 1711 aa18.98■□□□□ 0.63
ABCF3-210ENST00000473311 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
ABCF3-210ENST00000473311 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
ABCF3-210ENST00000473311 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
ABCF3-210ENST00000473311 FBLN2P98095 1184 aa18.96■□□□□ 0.63
ABCF3-210ENST00000473311 ANKRD50Q9ULJ7 1429 aa18.95■□□□□ 0.62
ABCF3-210ENST00000473311 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
ABCF3-210ENST00000473311 KDM5CP41229 1560 aa18.93■□□□□ 0.62
ABCF3-210ENST00000473311 CCDC136Q96JN2 1154 aa18.92■□□□□ 0.62
ABCF3-210ENST00000473311 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
ABCF3-210ENST00000473311 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
ABCF3-210ENST00000473311 NUP155O75694 1391 aa18.91■□□□□ 0.62
ABCF3-210ENST00000473311 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
ABCF3-210ENST00000473311 ARID4BQ4LE39 1312 aaPredicted RBP18.9■□□□□ 0.62
ABCF3-210ENST00000473311 SYNJ2O15056 1496 aa18.89■□□□□ 0.62
ABCF3-210ENST00000473311 PLEKHD1A6NEE1 506 aa18.89■□□□□ 0.61
ABCF3-210ENST00000473311 CARD11Q9BXL7 1154 aa18.89■□□□□ 0.61
ABCF3-210ENST00000473311 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
ABCF3-210ENST00000473311 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
ABCF3-210ENST00000473311 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
ABCF3-210ENST00000473311 C9orf84Q5VXU9 1444 aa18.87■□□□□ 0.61
ABCF3-210ENST00000473311 RALGAPBQ86X10 1494 aa18.87■□□□□ 0.61
ABCF3-210ENST00000473311 SENP3-EIF4A1A0A087X0R7 540 aa18.87■□□□□ 0.61
ABCF3-210ENST00000473311 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
ABCF3-210ENST00000473311 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
ABCF3-210ENST00000473311 UHRF1BP1Q6BDS2 1440 aa18.86■□□□□ 0.61
ABCF3-210ENST00000473311 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
ABCF3-210ENST00000473311 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
ABCF3-210ENST00000473311 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
ABCF3-210ENST00000473311 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
ABCF3-210ENST00000473311 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
ABCF3-210ENST00000473311 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
ABCF3-210ENST00000473311 ARHGEF12Q9NZN5 1544 aa18.83■□□□□ 0.6
ABCF3-210ENST00000473311 ABCC10Q5T3U5 1492 aa18.82■□□□□ 0.6
ABCF3-210ENST00000473311 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
ABCF3-210ENST00000473311 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
ABCF3-210ENST00000473311 DCAF11Q8TEB1 546 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms