RNA–Protein interactions for RNA: ENST00000472861.1

SH3YL1-218, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 3

Gene SH3YL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-218ENST00000472861 NCOA1Q15788 1441 aa14.07□□□□□ -0.16
SH3YL1-218ENST00000472861 SETD1BQ9UPS6 1966 aaKnown RBP14.07□□□□□ -0.16
SH3YL1-218ENST00000472861 FOXD1Q16676 465 aa14.07□□□□□ -0.16
SH3YL1-218ENST00000472861 RGS17Q9UGC6 210 aaPredicted RBP14.07□□□□□ -0.16
SH3YL1-218ENST00000472861 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
SH3YL1-218ENST00000472861 PIP4K2BP78356 416 aa14.05□□□□□ -0.16
SH3YL1-218ENST00000472861 MAGI2Q86UL8 1455 aa14.04□□□□□ -0.16
SH3YL1-218ENST00000472861 ZFYVE16Q7Z3T8 1539 aa14.04□□□□□ -0.16
SH3YL1-218ENST00000472861 TOM1O60784 492 aa14.03□□□□□ -0.16
SH3YL1-218ENST00000472861 ZMYM4Q5VZL5 1548 aa14.03□□□□□ -0.16
SH3YL1-218ENST00000472861 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
SH3YL1-218ENST00000472861 EFCAB5A4FU69 1503 aa14.02□□□□□ -0.16
SH3YL1-218ENST00000472861 ATP10BO94823 1461 aa14.01□□□□□ -0.17
SH3YL1-218ENST00000472861 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
SH3YL1-218ENST00000472861 NCKAP5LQ9HCH0 1330 aa13.97□□□□□ -0.17
SH3YL1-218ENST00000472861 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
SH3YL1-218ENST00000472861 ATP10AO60312 1499 aa13.96□□□□□ -0.17
SH3YL1-218ENST00000472861 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
SH3YL1-218ENST00000472861 C9orf84Q5VXU9 1444 aa13.93□□□□□ -0.18
SH3YL1-218ENST00000472861 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
SH3YL1-218ENST00000472861 CAMSAP1Q5T5Y3 1602 aa13.92□□□□□ -0.18
SH3YL1-218ENST00000472861 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
SH3YL1-218ENST00000472861 PKD2Q13563 968 aa13.91□□□□□ -0.18
SH3YL1-218ENST00000472861 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
SH3YL1-218ENST00000472861 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
SH3YL1-218ENST00000472861 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
SH3YL1-218ENST00000472861 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
SH3YL1-218ENST00000472861 C3P01024 1663 aa13.85□□□□□ -0.19
SH3YL1-218ENST00000472861 PTPRKQ15262 1439 aa13.85□□□□□ -0.19
SH3YL1-218ENST00000472861 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
SH3YL1-218ENST00000472861 SCAPERQ9BY12 1400 aa13.84□□□□□ -0.19
SH3YL1-218ENST00000472861 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
SH3YL1-218ENST00000472861 TCOF1Q13428 1488 aaKnown RBP13.83□□□□□ -0.2
SH3YL1-218ENST00000472861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
SH3YL1-218ENST00000472861 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
SH3YL1-218ENST00000472861 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
SH3YL1-218ENST00000472861 CPS1P31327 1500 aa13.83□□□□□ -0.2
SH3YL1-218ENST00000472861 ALKQ9UM73 1620 aa13.82□□□□□ -0.2
SH3YL1-218ENST00000472861 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
SH3YL1-218ENST00000472861 NPATQ14207 1427 aa13.81□□□□□ -0.2
SH3YL1-218ENST00000472861 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
SH3YL1-218ENST00000472861 SRCAPQ6ZRS2 3230 aa13.78□□□□□ -0.2
SH3YL1-218ENST00000472861 SHANK2Q9UPX8 1470 aa13.77□□□□□ -0.21
SH3YL1-218ENST00000472861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.76□□□□□ -0.21
SH3YL1-218ENST00000472861 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
SH3YL1-218ENST00000472861 AGLP35573 1532 aa13.75□□□□□ -0.21
SH3YL1-218ENST00000472861 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
SH3YL1-218ENST00000472861 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
SH3YL1-218ENST00000472861 REREQ9P2R6 1566 aa13.72□□□□□ -0.21
SH3YL1-218ENST00000472861 PLCH2O75038 1416 aa13.71□□□□□ -0.22
SH3YL1-218ENST00000472861 ZMYM3Q14202 1370 aa13.71□□□□□ -0.22
SH3YL1-218ENST00000472861 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
SH3YL1-218ENST00000472861 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
SH3YL1-218ENST00000472861 CTTNBP2Q8WZ74 1663 aa13.69□□□□□ -0.22
SH3YL1-218ENST00000472861 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
SH3YL1-218ENST00000472861 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
SH3YL1-218ENST00000472861 DIP2CQ9Y2E4 1556 aa13.67□□□□□ -0.22
SH3YL1-218ENST00000472861 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
SH3YL1-218ENST00000472861 CEP170BQ9Y4F5 1589 aaPredicted RBP13.66□□□□□ -0.22
SH3YL1-218ENST00000472861 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
SH3YL1-218ENST00000472861 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
SH3YL1-218ENST00000472861 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
SH3YL1-218ENST00000472861 KDM5CP41229 1560 aa13.65□□□□□ -0.22
SH3YL1-218ENST00000472861 VWDEQ8N2E2 1590 aa13.63□□□□□ -0.23
SH3YL1-218ENST00000472861 SLC24A1O60721 1099 aa13.63□□□□□ -0.23
SH3YL1-218ENST00000472861 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
SH3YL1-218ENST00000472861 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
SH3YL1-218ENST00000472861 MROH2AA6NES4 1674 aa13.61□□□□□ -0.23
SH3YL1-218ENST00000472861 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
SH3YL1-218ENST00000472861 NEURL4Q96JN8 1562 aa13.6□□□□□ -0.23
SH3YL1-218ENST00000472861 ABCA6Q8N139 1617 aa13.59□□□□□ -0.23
SH3YL1-218ENST00000472861 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
SH3YL1-218ENST00000472861 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
SH3YL1-218ENST00000472861 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
SH3YL1-218ENST00000472861 A2ML1A8K2U0 1454 aa13.58□□□□□ -0.24
SH3YL1-218ENST00000472861 TRIM52Q96A61 297 aa13.57□□□□□ -0.24
SH3YL1-218ENST00000472861 RNF17Q9BXT8 1623 aaKnown RBP13.57□□□□□ -0.24
SH3YL1-218ENST00000472861 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
SH3YL1-218ENST00000472861 ANKLE2Q86XL3 938 aa13.56□□□□□ -0.24
SH3YL1-218ENST00000472861 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
SH3YL1-218ENST00000472861 MED14O60244 1454 aa13.52□□□□□ -0.25
SH3YL1-218ENST00000472861 SAMD9Q5K651 1589 aa13.52□□□□□ -0.25
SH3YL1-218ENST00000472861 POLR1AO95602 1720 aaPredicted RBP13.51□□□□□ -0.25
SH3YL1-218ENST00000472861 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
SH3YL1-218ENST00000472861 ZNF772Q68DY9 489 aaPredicted RBP13.51□□□□□ -0.25
SH3YL1-218ENST00000472861 PRXQ9BXM0 1461 aa13.49□□□□□ -0.25
SH3YL1-218ENST00000472861 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
SH3YL1-218ENST00000472861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.48□□□□□ -0.252e-7■■■■■ 34.1
SH3YL1-218ENST00000472861 RXRBP28702 533 aa13.48□□□□□ -0.25
SH3YL1-218ENST00000472861 SYNMO15061 1565 aa13.48□□□□□ -0.25
SH3YL1-218ENST00000472861 THEMISQ8N1K5 641 aaPredicted RBP13.47□□□□□ -0.25
SH3YL1-218ENST00000472861 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
SH3YL1-218ENST00000472861 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
SH3YL1-218ENST00000472861 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
SH3YL1-218ENST00000472861 MYO5CQ9NQX4 1742 aa13.45□□□□□ -0.26
SH3YL1-218ENST00000472861 CLTCQ00610 1675 aaKnown RBP13.45□□□□□ -0.26
SH3YL1-218ENST00000472861 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
SH3YL1-218ENST00000472861 JCADQ9P266 1359 aa13.44□□□□□ -0.26
SH3YL1-218ENST00000472861 DEPDC5O75140 1603 aa13.43□□□□□ -0.26
SH3YL1-218ENST00000472861 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms