RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 MAPKBP1O60336 1514 aa22.12■■□□□ 1.13
GCOM1-206ENST00000471563 CFDP1Q9UEE9 299 aaPredicted RBP22.12■■□□□ 1.13
GCOM1-206ENST00000471563 ZNF777Q9ULD5 760 aaPredicted RBP22.1■■□□□ 1.13
GCOM1-206ENST00000471563 ABCC2Q92887 1545 aa22.08■■□□□ 1.12
GCOM1-206ENST00000471563 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
GCOM1-206ENST00000471563 DAPK1P53355 1430 aa22.06■■□□□ 1.12
GCOM1-206ENST00000471563 ABCC5O15440 1437 aa22.06■■□□□ 1.12
GCOM1-206ENST00000471563 CAMSAP2Q08AD1 1489 aa22.05■■□□□ 1.12
GCOM1-206ENST00000471563 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
GCOM1-206ENST00000471563 DNMT1P26358 1616 aaKnown RBP22.02■■□□□ 1.12
GCOM1-206ENST00000471563 CDC42BPAQ5VT25 1732 aa22.01■■□□□ 1.11
GCOM1-206ENST00000471563 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
GCOM1-206ENST00000471563 SIN3AQ96ST3 1273 aa22■■□□□ 1.11
GCOM1-206ENST00000471563 KDM6BO15054 1643 aa22■■□□□ 1.11
GCOM1-206ENST00000471563 AKNAQ7Z591 1439 aa21.97■■□□□ 1.11
GCOM1-206ENST00000471563 KCNH8Q96L42 1107 aa21.96■■□□□ 1.11
GCOM1-206ENST00000471563 GCC2Q8IWJ2 1684 aa21.96■■□□□ 1.11
GCOM1-206ENST00000471563 UHRF1BP1LA0JNW5 1464 aa21.95■■□□□ 1.1
GCOM1-206ENST00000471563 ZCCHC11Q5TAX3 1644 aaKnown RBP21.94■■□□□ 1.1
GCOM1-206ENST00000471563 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
GCOM1-206ENST00000471563 KDM5BQ9UGL1 1544 aa21.93■■□□□ 1.1
GCOM1-206ENST00000471563 TTC37Q6PGP7 1564 aa21.92■■□□□ 1.1
GCOM1-206ENST00000471563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.91■■□□□ 1.1
GCOM1-206ENST00000471563 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
GCOM1-206ENST00000471563 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
GCOM1-206ENST00000471563 CDC42BPBQ9Y5S2 1711 aa21.88■■□□□ 1.09
GCOM1-206ENST00000471563 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
GCOM1-206ENST00000471563 PREX2Q70Z35 1606 aa21.86■■□□□ 1.09
GCOM1-206ENST00000471563 DENND4BO75064 1496 aaPredicted RBP21.85■■□□□ 1.09
GCOM1-206ENST00000471563 CROCC2H7BZ55 1655 aa21.85■■□□□ 1.09
GCOM1-206ENST00000471563 SAMD9LQ8IVG5 1584 aa21.85■■□□□ 1.09
GCOM1-206ENST00000471563 MBD5Q9P267 1494 aa21.83■■□□□ 1.09
GCOM1-206ENST00000471563 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
GCOM1-206ENST00000471563 ADGRL2O95490 1459 aa21.81■■□□□ 1.08
GCOM1-206ENST00000471563 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
GCOM1-206ENST00000471563 C9orf84Q5VXU9 1444 aa21.8■■□□□ 1.08
GCOM1-206ENST00000471563 ADGBQ8N7X0 1667 aa21.8■■□□□ 1.08
GCOM1-206ENST00000471563 FOXD1Q16676 465 aa21.8■■□□□ 1.08
GCOM1-206ENST00000471563 ANKRD30AQ9BXX3 1397 aa21.8■■□□□ 1.08
GCOM1-206ENST00000471563 TSPY4P0CV99 314 aa21.78■■□□□ 1.08
GCOM1-206ENST00000471563 TSPY10P0CW01 314 aa21.78■■□□□ 1.08
GCOM1-206ENST00000471563 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.08
GCOM1-206ENST00000471563 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
GCOM1-206ENST00000471563 SHANK2Q9UPX8 1470 aa21.76■■□□□ 1.07
GCOM1-206ENST00000471563 ARHGEF5Q12774 1597 aa21.75■■□□□ 1.07
GCOM1-206ENST00000471563 PLCH2O75038 1416 aa21.74■■□□□ 1.07
GCOM1-206ENST00000471563 WDR7Q9Y4E6 1490 aa21.74■■□□□ 1.07
GCOM1-206ENST00000471563 CCDC141Q6ZP82 1450 aa21.74■■□□□ 1.07
GCOM1-206ENST00000471563 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
GCOM1-206ENST00000471563 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
GCOM1-206ENST00000471563 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
GCOM1-206ENST00000471563 TIMELESSQ9UNS1 1208 aa21.71■■□□□ 1.07
GCOM1-206ENST00000471563 ASXL2Q76L83 1435 aa21.7■■□□□ 1.06
GCOM1-206ENST00000471563 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
GCOM1-206ENST00000471563 KIF15Q9NS87 1388 aa21.7■■□□□ 1.06
GCOM1-206ENST00000471563 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
GCOM1-206ENST00000471563 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
GCOM1-206ENST00000471563 RSPH4AQ5TD94 716 aa21.68■■□□□ 1.06
GCOM1-206ENST00000471563 PZPP20742 1482 aa21.67■■□□□ 1.06
GCOM1-206ENST00000471563 KIAA1107Q9UPP5 1409 aa21.67■■□□□ 1.06
GCOM1-206ENST00000471563 SUPT16HQ9Y5B9 1047 aaKnown RBP21.67■■□□□ 1.06
GCOM1-206ENST00000471563 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.06
GCOM1-206ENST00000471563 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.05
GCOM1-206ENST00000471563 ANKRD30BQ9BXX2 1392 aa21.63■■□□□ 1.05
GCOM1-206ENST00000471563 TRAPPC8Q9Y2L5 1435 aa21.61■■□□□ 1.05
GCOM1-206ENST00000471563 ABCC1P33527 1531 aa21.61■■□□□ 1.05
GCOM1-206ENST00000471563 NUP155O75694 1391 aa21.6■■□□□ 1.05
GCOM1-206ENST00000471563 ABCA9Q8IUA7 1624 aa21.59■■□□□ 1.05
GCOM1-206ENST00000471563 PKD2Q13563 968 aa21.58■■□□□ 1.05
GCOM1-206ENST00000471563 AFAP1Q8N556 730 aa21.58■■□□□ 1.05
GCOM1-206ENST00000471563 MAST1Q9Y2H9 1570 aa21.58■■□□□ 1.05
GCOM1-206ENST00000471563 FANCAO15360 1455 aa21.57■■□□□ 1.04
GCOM1-206ENST00000471563 CYB5RLQ6IPT4 315 aa21.56■■□□□ 1.04
GCOM1-206ENST00000471563 ARAP3Q8WWN8 1544 aa21.56■■□□□ 1.04
GCOM1-206ENST00000471563 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
GCOM1-206ENST00000471563 L3MBTL2Q969R5 705 aa21.53■■□□□ 1.04
GCOM1-206ENST00000471563 RPRD2Q5VT52 1461 aaKnown RBP21.52■■□□□ 1.04
GCOM1-206ENST00000471563 PLXNC1O60486 1568 aa21.51■■□□□ 1.03
GCOM1-206ENST00000471563 KDM5DQ9BY66 1539 aa21.49■■□□□ 1.03
GCOM1-206ENST00000471563 SPAG9O60271 1321 aaKnown RBP21.49■■□□□ 1.03
GCOM1-206ENST00000471563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.49■■□□□ 1.03
GCOM1-206ENST00000471563 SCAPERQ9BY12 1400 aa21.48■■□□□ 1.03
GCOM1-206ENST00000471563 ADGRL1O94910 1474 aa21.48■■□□□ 1.03
GCOM1-206ENST00000471563 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
GCOM1-206ENST00000471563 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
GCOM1-206ENST00000471563 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
GCOM1-206ENST00000471563 DUOX2Q9NRD8 1548 aa21.46■■□□□ 1.03
GCOM1-206ENST00000471563 FAM135AQ9P2D6 1515 aa21.45■■□□□ 1.02
GCOM1-206ENST00000471563 CD109Q6YHK3 1445 aa21.45■■□□□ 1.02
GCOM1-206ENST00000471563 TEX14Q8IWB6 1497 aa21.45■■□□□ 1.02
GCOM1-206ENST00000471563 ZFYVE16Q7Z3T8 1539 aa21.44■■□□□ 1.02
GCOM1-206ENST00000471563 TSHZ2Q9NRE2 1034 aa21.41■■□□□ 1.02
GCOM1-206ENST00000471563 RTEL1-TNFRSF6BF6WH68 1400 aa21.41■■□□□ 1.02
GCOM1-206ENST00000471563 ERBINQ96RT1 1412 aa21.41■■□□□ 1.02
GCOM1-206ENST00000471563 UNC13BO14795 1591 aa21.41■■□□□ 1.02
GCOM1-206ENST00000471563 MYT1LQ9UL68 1186 aa21.4■■□□□ 1.02
GCOM1-206ENST00000471563 NBPF8Q3BBV2 869 aa21.4■■□□□ 1.02
GCOM1-206ENST00000471563 ATP7AQ04656 1500 aa21.38■■□□□ 1.01
GCOM1-206ENST00000471563 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
GCOM1-206ENST00000471563 MAGI2Q86UL8 1455 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms