RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 PREX2Q70Z35 1606 aa19.45■□□□□ 0.7
TMEM139-206ENST00000471161 HFM1A2PYH4 1435 aa19.44■□□□□ 0.7
TMEM139-206ENST00000471161 ABCC5O15440 1437 aa19.44■□□□□ 0.7
TMEM139-206ENST00000471161 DAPK1P53355 1430 aa19.44■□□□□ 0.7
TMEM139-206ENST00000471161 CHIC2Q9UKJ5 165 aa19.43■□□□□ 0.7
TMEM139-206ENST00000471161 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
TMEM139-206ENST00000471161 NAIPQ13075 1403 aa19.43■□□□□ 0.7
TMEM139-206ENST00000471161 KCNH8Q96L42 1107 aa19.42■□□□□ 0.7
TMEM139-206ENST00000471161 GCC2Q8IWJ2 1684 aa19.4■□□□□ 0.7
TMEM139-206ENST00000471161 MYO5CQ9NQX4 1742 aa19.39■□□□□ 0.7
TMEM139-206ENST00000471161 RRP7BPQ9NSQ0 103 aa19.39■□□□□ 0.69
TMEM139-206ENST00000471161 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
TMEM139-206ENST00000471161 CROCC2H7BZ55 1655 aa19.38■□□□□ 0.69
TMEM139-206ENST00000471161 SAMD9LQ8IVG5 1584 aa19.37■□□□□ 0.69
TMEM139-206ENST00000471161 WDR7Q9Y4E6 1490 aa19.37■□□□□ 0.69
TMEM139-206ENST00000471161 RIMBP3CA6NJZ7 1639 aa19.35■□□□□ 0.69
TMEM139-206ENST00000471161 RIMBP3BA6NNM3 1639 aa19.35■□□□□ 0.69
TMEM139-206ENST00000471161 RIMBP3Q9UFD9 1639 aa19.35■□□□□ 0.69
TMEM139-206ENST00000471161 ARHGAP5Q13017 1502 aa19.34■□□□□ 0.69
TMEM139-206ENST00000471161 ROCK1Q13464 1354 aa19.34■□□□□ 0.69
TMEM139-206ENST00000471161 KDM6BO15054 1643 aa19.34■□□□□ 0.69
TMEM139-206ENST00000471161 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
TMEM139-206ENST00000471161 ASXL2Q76L83 1435 aa19.34■□□□□ 0.69
TMEM139-206ENST00000471161 ADGBQ8N7X0 1667 aa19.33■□□□□ 0.68
TMEM139-206ENST00000471161 MAPKBP1O60336 1514 aa19.32■□□□□ 0.68
TMEM139-206ENST00000471161 PLCH2O75038 1416 aa19.31■□□□□ 0.68
TMEM139-206ENST00000471161 ARHGEF5Q12774 1597 aa19.31■□□□□ 0.68
TMEM139-206ENST00000471161 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
TMEM139-206ENST00000471161 HNRNPMP52272 730 aaKnown RBP eCLIP19.3■□□□□ 0.68
TMEM139-206ENST00000471161 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
TMEM139-206ENST00000471161 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
TMEM139-206ENST00000471161 ABCA9Q8IUA7 1624 aa19.28■□□□□ 0.68
TMEM139-206ENST00000471161 SYCP2Q9BX26 1530 aa19.27■□□□□ 0.68
TMEM139-206ENST00000471161 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
TMEM139-206ENST00000471161 SHANK2Q9UPX8 1470 aa19.27■□□□□ 0.68
TMEM139-206ENST00000471161 CYB5RLQ6IPT4 315 aa19.25■□□□□ 0.67
TMEM139-206ENST00000471161 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
TMEM139-206ENST00000471161 CCDC141Q6ZP82 1450 aa19.24■□□□□ 0.67
TMEM139-206ENST00000471161 ARAP3Q8WWN8 1544 aa19.24■□□□□ 0.67
TMEM139-206ENST00000471161 ARHGEF12Q9NZN5 1544 aa19.24■□□□□ 0.67
TMEM139-206ENST00000471161 EFCAB2Q5VUJ9 269 aa19.22■□□□□ 0.67
TMEM139-206ENST00000471161 PLEKHH2Q8IVE3 1493 aa19.22■□□□□ 0.67
TMEM139-206ENST00000471161 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
TMEM139-206ENST00000471161 ANKRD30AQ9BXX3 1397 aa19.22■□□□□ 0.67
TMEM139-206ENST00000471161 ABCC1P33527 1531 aa19.21■□□□□ 0.67
TMEM139-206ENST00000471161 TSPY4P0CV99 314 aa19.2■□□□□ 0.66
TMEM139-206ENST00000471161 TSPY10P0CW01 314 aa19.2■□□□□ 0.66
TMEM139-206ENST00000471161 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
TMEM139-206ENST00000471161 MAST1Q9Y2H9 1570 aa19.18■□□□□ 0.66
TMEM139-206ENST00000471161 DENND4BO75064 1496 aaPredicted RBP19.17■□□□□ 0.66
TMEM139-206ENST00000471161 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
TMEM139-206ENST00000471161 FANCAO15360 1455 aa19.15■□□□□ 0.66
TMEM139-206ENST00000471161 TRAPPC8Q9Y2L5 1435 aa19.15■□□□□ 0.66
TMEM139-206ENST00000471161 SIN3AQ96ST3 1273 aa19.14■□□□□ 0.66
TMEM139-206ENST00000471161 ANKRD50Q9ULJ7 1429 aa19.14■□□□□ 0.65
TMEM139-206ENST00000471161 KIF15Q9NS87 1388 aa19.14■□□□□ 0.65
TMEM139-206ENST00000471161 MPHOSPH9Q99550 1183 aa19.11■□□□□ 0.65
TMEM139-206ENST00000471161 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
TMEM139-206ENST00000471161 CD109Q6YHK3 1445 aa19.1■□□□□ 0.65
TMEM139-206ENST00000471161 ACIN1Q9UKV3 1341 aaKnown RBP19.09■□□□□ 0.65
TMEM139-206ENST00000471161 NEUROD1Q13562 356 aa19.08■□□□□ 0.65
TMEM139-206ENST00000471161 ADGRL1O94910 1474 aa19.08■□□□□ 0.64
TMEM139-206ENST00000471161 PZPP20742 1482 aa19.08■□□□□ 0.64
TMEM139-206ENST00000471161 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
TMEM139-206ENST00000471161 SCAPERQ9BY12 1400 aa19.06■□□□□ 0.64
TMEM139-206ENST00000471161 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
TMEM139-206ENST00000471161 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
TMEM139-206ENST00000471161 ZFYVE16Q7Z3T8 1539 aa19.03■□□□□ 0.64
TMEM139-206ENST00000471161 FOXD1Q16676 465 aa19.03■□□□□ 0.64
TMEM139-206ENST00000471161 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
TMEM139-206ENST00000471161 GLI2P10070 1586 aa19.02■□□□□ 0.64
TMEM139-206ENST00000471161 SPAG9O60271 1321 aaKnown RBP19.02■□□□□ 0.64
TMEM139-206ENST00000471161 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
TMEM139-206ENST00000471161 RTEL1-TNFRSF6BF6WH68 1400 aa19.01■□□□□ 0.63
TMEM139-206ENST00000471161 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
TMEM139-206ENST00000471161 KDM5DQ9BY66 1539 aa19.01■□□□□ 0.63
TMEM139-206ENST00000471161 DIP2BQ9P265 1576 aa19■□□□□ 0.63
TMEM139-206ENST00000471161 NUP155O75694 1391 aa18.98■□□□□ 0.63
TMEM139-206ENST00000471161 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
TMEM139-206ENST00000471161 UNC13BO14795 1591 aa18.97■□□□□ 0.63
TMEM139-206ENST00000471161 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
TMEM139-206ENST00000471161 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
TMEM139-206ENST00000471161 NEO1Q92859 1461 aa18.96■□□□□ 0.63
TMEM139-206ENST00000471161 ERBINQ96RT1 1412 aa18.96■□□□□ 0.63
TMEM139-206ENST00000471161 KIDINS220Q9ULH0 1771 aa18.95■□□□□ 0.62
TMEM139-206ENST00000471161 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
TMEM139-206ENST00000471161 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
TMEM139-206ENST00000471161 POGZQ7Z3K3 1410 aa18.94■□□□□ 0.62
TMEM139-206ENST00000471161 PKD2Q13563 968 aa18.94■□□□□ 0.62
TMEM139-206ENST00000471161 KDM5CP41229 1560 aa18.93■□□□□ 0.62
TMEM139-206ENST00000471161 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
TMEM139-206ENST00000471161 FAM135AQ9P2D6 1515 aa18.92■□□□□ 0.62
TMEM139-206ENST00000471161 TSPOAP1O95153 1857 aa18.91■□□□□ 0.62
TMEM139-206ENST00000471161 ZNF316A6NFI3 1004 aaPredicted RBP18.91■□□□□ 0.62
TMEM139-206ENST00000471161 MAGI2Q86UL8 1455 aa18.91■□□□□ 0.62
TMEM139-206ENST00000471161 PPRC1Q5VV67 1664 aaKnown RBP18.9■□□□□ 0.62
TMEM139-206ENST00000471161 PPP1R15AO75807 674 aaPredicted RBP18.9■□□□□ 0.62
TMEM139-206ENST00000471161 IQGAP3Q86VI3 1631 aa18.89■□□□□ 0.62
TMEM139-206ENST00000471161 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
TMEM139-206ENST00000471161 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms