RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
SFXN3-205ENST00000470252 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
SFXN3-205ENST00000470252 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
SFXN3-205ENST00000470252 EPRSP07814 1512 aaKnown RBP18.11■□□□□ 0.49
SFXN3-205ENST00000470252 MRS2Q9HD23 443 aa18.1■□□□□ 0.49
SFXN3-205ENST00000470252 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
SFXN3-205ENST00000470252 CDK13Q14004 1512 aaKnown RBP18.09■□□□□ 0.49
SFXN3-205ENST00000470252 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.48
SFXN3-205ENST00000470252 ERICH6Q7L0X2 663 aa18.08■□□□□ 0.48
SFXN3-205ENST00000470252 ARID3CA6NKF2 412 aa18.06■□□□□ 0.48
SFXN3-205ENST00000470252 IQGAP2Q13576 1575 aa18.06■□□□□ 0.48
SFXN3-205ENST00000470252 PBRM1Q86U86 1689 aa18.05■□□□□ 0.48
SFXN3-205ENST00000470252 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
SFXN3-205ENST00000470252 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
SFXN3-205ENST00000470252 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
SFXN3-205ENST00000470252 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
SFXN3-205ENST00000470252 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
SFXN3-205ENST00000470252 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
SFXN3-205ENST00000470252 TEX14Q8IWB6 1497 aa18.03■□□□□ 0.48
SFXN3-205ENST00000470252 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.48
SFXN3-205ENST00000470252 B4GALNT3Q6L9W6 998 aa18.02■□□□□ 0.48
SFXN3-205ENST00000470252 DAPK1P53355 1430 aa18.01■□□□□ 0.47
SFXN3-205ENST00000470252 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
SFXN3-205ENST00000470252 ROCK1Q13464 1354 aa17.99■□□□□ 0.47
SFXN3-205ENST00000470252 DNMT1P26358 1616 aaKnown RBP17.99■□□□□ 0.47
SFXN3-205ENST00000470252 SPATA31E1Q6ZUB1 1445 aa17.99■□□□□ 0.47
SFXN3-205ENST00000470252 PRKCSHP14314 528 aaPredicted RBP17.98■□□□□ 0.47
SFXN3-205ENST00000470252 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
SFXN3-205ENST00000470252 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
SFXN3-205ENST00000470252 ABCC5O15440 1437 aa17.96■□□□□ 0.47
SFXN3-205ENST00000470252 ZNF644Q9H582 1327 aaPredicted RBP17.93■□□□□ 0.46
SFXN3-205ENST00000470252 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
SFXN3-205ENST00000470252 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
SFXN3-205ENST00000470252 SMG6Q86US8 1419 aaKnown RBP17.89■□□□□ 0.45
SFXN3-205ENST00000470252 POLR3GLQ9BT43 218 aa17.89■□□□□ 0.45
SFXN3-205ENST00000470252 BCORL1Q5H9F3 1711 aa17.88■□□□□ 0.45
SFXN3-205ENST00000470252 DHX29Q7Z478 1369 aaKnown RBP17.88■□□□□ 0.45
SFXN3-205ENST00000470252 PZPP20742 1482 aa17.87■□□□□ 0.45
SFXN3-205ENST00000470252 KIAA0556O60303 1618 aa17.86■□□□□ 0.45
SFXN3-205ENST00000470252 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
SFXN3-205ENST00000470252 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
SFXN3-205ENST00000470252 RAPGEF6Q8TEU7 1601 aa17.85■□□□□ 0.45
SFXN3-205ENST00000470252 NUP153P49790 1475 aaKnown RBP17.85■□□□□ 0.45
SFXN3-205ENST00000470252 USP47Q96K76 1375 aa17.85■□□□□ 0.45
SFXN3-205ENST00000470252 MBD5Q9P267 1494 aa17.85■□□□□ 0.45
SFXN3-205ENST00000470252 NUDCQ9Y266 331 aa17.84■□□□□ 0.45
SFXN3-205ENST00000470252 KIF14Q15058 1648 aa17.84■□□□□ 0.45
SFXN3-205ENST00000470252 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
SFXN3-205ENST00000470252 CAMSAP2Q08AD1 1489 aa17.82■□□□□ 0.44
SFXN3-205ENST00000470252 MYT1LQ9UL68 1186 aa17.81■□□□□ 0.44
SFXN3-205ENST00000470252 KDM5CP41229 1560 aa17.81■□□□□ 0.44
SFXN3-205ENST00000470252 KIAA1107Q9UPP5 1409 aa17.81■□□□□ 0.44
SFXN3-205ENST00000470252 ITSN2Q9NZM3 1697 aa17.81■□□□□ 0.44
SFXN3-205ENST00000470252 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
SFXN3-205ENST00000470252 NOP58Q9Y2X3 529 aaKnown RBP17.79■□□□□ 0.44
SFXN3-205ENST00000470252 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
SFXN3-205ENST00000470252 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
SFXN3-205ENST00000470252 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
SFXN3-205ENST00000470252 KIAA0586Q9BVV6 1533 aa17.79■□□□□ 0.44
SFXN3-205ENST00000470252 CROCC2H7BZ55 1655 aa17.78■□□□□ 0.44
SFXN3-205ENST00000470252 PKD2Q13563 968 aa17.77■□□□□ 0.44
SFXN3-205ENST00000470252 PRG4Q92954 1404 aaPredicted RBP17.77■□□□□ 0.44
SFXN3-205ENST00000470252 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
SFXN3-205ENST00000470252 FBLN2P98095 1184 aa17.76■□□□□ 0.43
SFXN3-205ENST00000470252 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
SFXN3-205ENST00000470252 TROQ12816 1431 aaPredicted RBP17.76■□□□□ 0.43
SFXN3-205ENST00000470252 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
SFXN3-205ENST00000470252 PNISRQ8TF01 805 aaKnown RBP17.74■□□□□ 0.43
SFXN3-205ENST00000470252 ADGRL2O95490 1459 aa17.74■□□□□ 0.43
SFXN3-205ENST00000470252 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
SFXN3-205ENST00000470252 DEKP35659 375 aaKnown RBP17.74■□□□□ 0.43
SFXN3-205ENST00000470252 ROCK2O75116 1388 aaKnown RBP17.73■□□□□ 0.43
SFXN3-205ENST00000470252 GPATCH8Q9UKJ3 1502 aaKnown RBP17.73■□□□□ 0.43
SFXN3-205ENST00000470252 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
SFXN3-205ENST00000470252 ANKRD30AQ9BXX3 1397 aa17.72■□□□□ 0.43
SFXN3-205ENST00000470252 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
SFXN3-205ENST00000470252 NBR1Q14596 966 aa17.71■□□□□ 0.43
SFXN3-205ENST00000470252 ADCY10Q96PN6 1610 aa17.71■□□□□ 0.42
SFXN3-205ENST00000470252 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
SFXN3-205ENST00000470252 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
SFXN3-205ENST00000470252 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
SFXN3-205ENST00000470252 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
SFXN3-205ENST00000470252 ANKRD50Q9ULJ7 1429 aa17.7■□□□□ 0.42
SFXN3-205ENST00000470252 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
SFXN3-205ENST00000470252 CHD1O14646 1710 aa17.69■□□□□ 0.42
SFXN3-205ENST00000470252 KIF15Q9NS87 1388 aa17.69■□□□□ 0.42
SFXN3-205ENST00000470252 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
SFXN3-205ENST00000470252 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
SFXN3-205ENST00000470252 PLB1Q6P1J6 1458 aa17.67■□□□□ 0.42
SFXN3-205ENST00000470252 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
SFXN3-205ENST00000470252 NUP155O75694 1391 aa17.66■□□□□ 0.42
SFXN3-205ENST00000470252 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
SFXN3-205ENST00000470252 ARHGEF12Q9NZN5 1544 aa17.66■□□□□ 0.42
SFXN3-205ENST00000470252 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
SFXN3-205ENST00000470252 MYBBP1AQ9BQG0 1328 aaKnown RBP17.65■□□□□ 0.42
SFXN3-205ENST00000470252 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
SFXN3-205ENST00000470252 CDC42BPAQ5VT25 1732 aa17.65■□□□□ 0.42
SFXN3-205ENST00000470252 ST20-MTHFSA0A0A6YYL1 179 aa17.64■□□□□ 0.41
SFXN3-205ENST00000470252 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
SFXN3-205ENST00000470252 E9PCH4 1651 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms