RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 FOXD1Q16676 465 aa20.86■□□□□ 0.93
CBWD3-205ENST00000469687 MPHOSPH9Q99550 1183 aa20.86■□□□□ 0.93
CBWD3-205ENST00000469687 NUP160Q12769 1436 aa20.85■□□□□ 0.93
CBWD3-205ENST00000469687 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
CBWD3-205ENST00000469687 KIF14Q15058 1648 aa20.84■□□□□ 0.93
CBWD3-205ENST00000469687 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
CBWD3-205ENST00000469687 JPH4Q96JJ6 628 aa20.83■□□□□ 0.93
CBWD3-205ENST00000469687 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
CBWD3-205ENST00000469687 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
CBWD3-205ENST00000469687 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
CBWD3-205ENST00000469687 ITSN2Q9NZM3 1697 aa20.78■□□□□ 0.92
CBWD3-205ENST00000469687 GPATCH8Q9UKJ3 1502 aaKnown RBP20.78■□□□□ 0.92
CBWD3-205ENST00000469687 ADCY10Q96PN6 1610 aa20.77■□□□□ 0.92
CBWD3-205ENST00000469687 CFDP1Q9UEE9 299 aaPredicted RBP20.76■□□□□ 0.91
CBWD3-205ENST00000469687 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
CBWD3-205ENST00000469687 ZNF777Q9ULD5 760 aaPredicted RBP20.74■□□□□ 0.91
CBWD3-205ENST00000469687 ANP32CO43423 234 aa20.73■□□□□ 0.91
CBWD3-205ENST00000469687 ABCA8O94911 1581 aa20.72■□□□□ 0.91
CBWD3-205ENST00000469687 ANKRD30BQ9BXX2 1392 aa20.72■□□□□ 0.91
CBWD3-205ENST00000469687 SUPT16HQ9Y5B9 1047 aaKnown RBP20.71■□□□□ 0.91
CBWD3-205ENST00000469687 ADGBQ8N7X0 1667 aa20.71■□□□□ 0.91
CBWD3-205ENST00000469687 HSPA5P11021 654 aaKnown RBP20.7■□□□□ 0.91
CBWD3-205ENST00000469687 CROCC2H7BZ55 1655 aa20.7■□□□□ 0.91
CBWD3-205ENST00000469687 CDC42BPAQ5VT25 1732 aa20.69■□□□□ 0.9
CBWD3-205ENST00000469687 SLC4A1APQ9BWU0 796 aaKnown RBP20.69■□□□□ 0.9
CBWD3-205ENST00000469687 NCOA1Q15788 1441 aa20.69■□□□□ 0.9
CBWD3-205ENST00000469687 ATP10BO94823 1461 aa20.68■□□□□ 0.9
CBWD3-205ENST00000469687 RPRD2Q5VT52 1461 aaKnown RBP20.68■□□□□ 0.9
CBWD3-205ENST00000469687 CCER2I3L3R5 266 aa20.67■□□□□ 0.9
CBWD3-205ENST00000469687 PZPP20742 1482 aa20.67■□□□□ 0.9
CBWD3-205ENST00000469687 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
CBWD3-205ENST00000469687 TEX14Q8IWB6 1497 aa20.66■□□□□ 0.9
CBWD3-205ENST00000469687 PLEKHD1A6NEE1 506 aa20.63■□□□□ 0.89
CBWD3-205ENST00000469687 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
CBWD3-205ENST00000469687 ADGRL2O95490 1459 aa20.63■□□□□ 0.89
CBWD3-205ENST00000469687 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
CBWD3-205ENST00000469687 EIF4G2P78344 907 aaKnown RBP eCLIP20.62■□□□□ 0.89
CBWD3-205ENST00000469687 CHD1O14646 1710 aa20.6■□□□□ 0.89
CBWD3-205ENST00000469687 C11orf95C9JLR9 678 aaPredicted RBP20.58■□□□□ 0.89
CBWD3-205ENST00000469687 ANKRD30AQ9BXX3 1397 aa20.57■□□□□ 0.88
CBWD3-205ENST00000469687 PTPRGP23470 1445 aa20.56■□□□□ 0.88
CBWD3-205ENST00000469687 ANKRD50Q9ULJ7 1429 aa20.56■□□□□ 0.88
CBWD3-205ENST00000469687 C9orf84Q5VXU9 1444 aa20.53■□□□□ 0.88
CBWD3-205ENST00000469687 KIAA1107Q9UPP5 1409 aa20.53■□□□□ 0.88
CBWD3-205ENST00000469687 PKD2Q13563 968 aa20.52■□□□□ 0.88
CBWD3-205ENST00000469687 SHANK2Q9UPX8 1470 aa20.51■□□□□ 0.87
CBWD3-205ENST00000469687 HNRNPMP52272 730 aaKnown RBP eCLIP20.51■□□□□ 0.87
CBWD3-205ENST00000469687 CDC42BPBQ9Y5S2 1711 aa20.5■□□□□ 0.87
CBWD3-205ENST00000469687 CCDC7Q96M83 1385 aa20.5■□□□□ 0.87
CBWD3-205ENST00000469687 CNTLNQ9NXG0 1405 aa20.5■□□□□ 0.87
CBWD3-205ENST00000469687 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
CBWD3-205ENST00000469687 MBD5Q9P267 1494 aa20.48■□□□□ 0.87
CBWD3-205ENST00000469687 SAMD9LQ8IVG5 1584 aa20.47■□□□□ 0.87
CBWD3-205ENST00000469687 NUP155O75694 1391 aa20.47■□□□□ 0.87
CBWD3-205ENST00000469687 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
CBWD3-205ENST00000469687 POLR1AO95602 1720 aaPredicted RBP20.46■□□□□ 0.87
CBWD3-205ENST00000469687 PREX2Q70Z35 1606 aa20.45■□□□□ 0.86
CBWD3-205ENST00000469687 TSPY4P0CV99 314 aa20.45■□□□□ 0.86
CBWD3-205ENST00000469687 TSPY10P0CW01 314 aa20.45■□□□□ 0.86
CBWD3-205ENST00000469687 BCANQ96GW7 911 aa20.45■□□□□ 0.86
CBWD3-205ENST00000469687 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
CBWD3-205ENST00000469687 ARHGEF5Q12774 1597 aa20.44■□□□□ 0.86
CBWD3-205ENST00000469687 FKBP8Q14318 412 aa20.44■□□□□ 0.86
CBWD3-205ENST00000469687 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
CBWD3-205ENST00000469687 ZNF326Q5BKZ1 582 aaKnown RBP20.44■□□□□ 0.86
CBWD3-205ENST00000469687 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
CBWD3-205ENST00000469687 KIF7Q2M1P5 1343 aa20.43■□□□□ 0.86
CBWD3-205ENST00000469687 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
CBWD3-205ENST00000469687 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
CBWD3-205ENST00000469687 CCDC141Q6ZP82 1450 aa20.39■□□□□ 0.85
CBWD3-205ENST00000469687 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
CBWD3-205ENST00000469687 BCORL1Q5H9F3 1711 aa20.39■□□□□ 0.85
CBWD3-205ENST00000469687 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
CBWD3-205ENST00000469687 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
CBWD3-205ENST00000469687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.37■□□□□ 0.85
CBWD3-205ENST00000469687 USP47Q96K76 1375 aa20.36■□□□□ 0.85
CBWD3-205ENST00000469687 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
CBWD3-205ENST00000469687 ABCC2Q92887 1545 aa20.34■□□□□ 0.85
CBWD3-205ENST00000469687 KDM5CP41229 1560 aa20.34■□□□□ 0.85
CBWD3-205ENST00000469687 FAM135AQ9P2D6 1515 aa20.32■□□□□ 0.84
CBWD3-205ENST00000469687 MYO5CQ9NQX4 1742 aa20.31■□□□□ 0.84
CBWD3-205ENST00000469687 UHRF1BP1Q6BDS2 1440 aa20.3■□□□□ 0.84
CBWD3-205ENST00000469687 RALGAPBQ86X10 1494 aa20.29■□□□□ 0.84
CBWD3-205ENST00000469687 NEFLP07196 543 aa20.29■□□□□ 0.84
CBWD3-205ENST00000469687 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
CBWD3-205ENST00000469687 KDM2AQ9Y2K7 1162 aa20.29■□□□□ 0.84
CBWD3-205ENST00000469687 ARHGEF12Q9NZN5 1544 aa20.28■□□□□ 0.84
CBWD3-205ENST00000469687 RSPH4AQ5TD94 716 aa20.27■□□□□ 0.84
CBWD3-205ENST00000469687 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
CBWD3-205ENST00000469687 FAM9BQ8IZU0 186 aa20.27■□□□□ 0.83
CBWD3-205ENST00000469687 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.83
CBWD3-205ENST00000469687 MAST1Q9Y2H9 1570 aa20.26■□□□□ 0.83
CBWD3-205ENST00000469687 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
CBWD3-205ENST00000469687 ZCCHC11Q5TAX3 1644 aaKnown RBP20.25■□□□□ 0.83
CBWD3-205ENST00000469687 DHX29Q7Z478 1369 aaKnown RBP20.25■□□□□ 0.83
CBWD3-205ENST00000469687 DCAF11Q8TEB1 546 aa20.25■□□□□ 0.83
CBWD3-205ENST00000469687 CARD11Q9BXL7 1154 aa20.24■□□□□ 0.83
CBWD3-205ENST00000469687 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
CBWD3-205ENST00000469687 UNC13BO14795 1591 aa20.23■□□□□ 0.83
CBWD3-205ENST00000469687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms