RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
TMC1-203ENST00000469455 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
TMC1-203ENST00000469455 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
TMC1-203ENST00000469455 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
TMC1-203ENST00000469455 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
TMC1-203ENST00000469455 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
TMC1-203ENST00000469455 NESP48681 1621 aa11.64□□□□□ -0.55
TMC1-203ENST00000469455 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
TMC1-203ENST00000469455 TRPC6Q9Y210 931 aa11.62□□□□□ -0.55
TMC1-203ENST00000469455 MFSD10Q14728 455 aa11.61□□□□□ -0.55
TMC1-203ENST00000469455 TIE1P35590 1138 aa11.6□□□□□ -0.55
TMC1-203ENST00000469455 CRISPLD2Q9H0B8 497 aa11.6□□□□□ -0.55
TMC1-203ENST00000469455 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
TMC1-203ENST00000469455 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
TMC1-203ENST00000469455 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
TMC1-203ENST00000469455 SEMA3EO15041 775 aa11.56□□□□□ -0.56
TMC1-203ENST00000469455 ARIH1Q9Y4X5 557 aaPredicted RBP11.56□□□□□ -0.56
TMC1-203ENST00000469455 TTLL13PA6NNM8 815 aa11.55□□□□□ -0.56
TMC1-203ENST00000469455 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
TMC1-203ENST00000469455 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
TMC1-203ENST00000469455 PDS5BQ9NTI5 1447 aa11.53□□□□□ -0.56
TMC1-203ENST00000469455 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
TMC1-203ENST00000469455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.57
TMC1-203ENST00000469455 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
TMC1-203ENST00000469455 SMYD5Q6GMV2 418 aa11.51□□□□□ -0.57
TMC1-203ENST00000469455 BMP2KQ9NSY1 1161 aaPredicted RBP11.51□□□□□ -0.57
TMC1-203ENST00000469455 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
TMC1-203ENST00000469455 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
TMC1-203ENST00000469455 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
TMC1-203ENST00000469455 CLCN6P51797 869 aa11.48□□□□□ -0.57
TMC1-203ENST00000469455 GPHNQ9NQX3 736 aaPredicted RBP11.48□□□□□ -0.57
TMC1-203ENST00000469455 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
TMC1-203ENST00000469455 TMEM132AQ24JP5 1023 aa11.47□□□□□ -0.57
TMC1-203ENST00000469455 TRIM35Q9UPQ4 493 aa11.47□□□□□ -0.57
TMC1-203ENST00000469455 TOP2BQ02880 1626 aa11.46□□□□□ -0.57
TMC1-203ENST00000469455 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
TMC1-203ENST00000469455 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
TMC1-203ENST00000469455 CUX1P39880 1505 aa11.45□□□□□ -0.58
TMC1-203ENST00000469455 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
TMC1-203ENST00000469455 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
TMC1-203ENST00000469455 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
TMC1-203ENST00000469455 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
TMC1-203ENST00000469455 URB2Q14146 1524 aaKnown RBP11.43□□□□□ -0.58
TMC1-203ENST00000469455 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
TMC1-203ENST00000469455 WDR62O43379 1518 aa11.42□□□□□ -0.58
TMC1-203ENST00000469455 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
TMC1-203ENST00000469455 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
TMC1-203ENST00000469455 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
TMC1-203ENST00000469455 HAX1O00165 279 aa11.39□□□□□ -0.59
TMC1-203ENST00000469455 ZMYND10O75800 440 aa11.38□□□□□ -0.59
TMC1-203ENST00000469455 MICALL2Q8IY33 904 aa11.38□□□□□ -0.59
TMC1-203ENST00000469455 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
TMC1-203ENST00000469455 PDCD7Q8N8D1 485 aaKnown RBP11.36□□□□□ -0.59
TMC1-203ENST00000469455 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
TMC1-203ENST00000469455 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
TMC1-203ENST00000469455 DSG2Q14126 1118 aa11.35□□□□□ -0.59
TMC1-203ENST00000469455 TMC2Q8TDI7 906 aa11.35□□□□□ -0.59
TMC1-203ENST00000469455 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
TMC1-203ENST00000469455 FGD5Q6ZNL6 1462 aa11.34□□□□□ -0.59
TMC1-203ENST00000469455 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
TMC1-203ENST00000469455 FOXK1P85037 733 aa11.34□□□□□ -0.59
TMC1-203ENST00000469455 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
TMC1-203ENST00000469455 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
TMC1-203ENST00000469455 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
TMC1-203ENST00000469455 EVX2Q03828 476 aa11.33□□□□□ -0.6
TMC1-203ENST00000469455 IER5LQ5T953 404 aa11.33□□□□□ -0.6
TMC1-203ENST00000469455 TMEM121BQ9BXQ6 578 aaPredicted RBP11.33□□□□□ -0.6
TMC1-203ENST00000469455 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
TMC1-203ENST00000469455 ATMINO43313 823 aaPredicted RBP11.32□□□□□ -0.6
TMC1-203ENST00000469455 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
TMC1-203ENST00000469455 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
TMC1-203ENST00000469455 DPYSL4O14531 572 aa11.31□□□□□ -0.6
TMC1-203ENST00000469455 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
TMC1-203ENST00000469455 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
TMC1-203ENST00000469455 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
TMC1-203ENST00000469455 PDIA6Q15084 440 aa11.3□□□□□ -0.6
TMC1-203ENST00000469455 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
TMC1-203ENST00000469455 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
TMC1-203ENST00000469455 G3V3G9 751 aa11.29□□□□□ -0.6
TMC1-203ENST00000469455 NEUROD2Q15784 382 aa11.29□□□□□ -0.6
TMC1-203ENST00000469455 CUX2O14529 1486 aa11.29□□□□□ -0.6
TMC1-203ENST00000469455 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
TMC1-203ENST00000469455 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
TMC1-203ENST00000469455 PLPP6Q8IY26 295 aa11.27□□□□□ -0.61
TMC1-203ENST00000469455 TIMELESSQ9UNS1 1208 aa11.27□□□□□ -0.61
TMC1-203ENST00000469455 KIF3CO14782 793 aa11.26□□□□□ -0.61
TMC1-203ENST00000469455 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
TMC1-203ENST00000469455 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
TMC1-203ENST00000469455 C2orf72A6NCS6 295 aa11.25□□□□□ -0.61
TMC1-203ENST00000469455 SOGA1O94964 1423 aa11.25□□□□□ -0.61
TMC1-203ENST00000469455 PLCG2P16885 1265 aa11.24□□□□□ -0.61
TMC1-203ENST00000469455 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
TMC1-203ENST00000469455 ABCA5Q8WWZ7 1642 aa11.24□□□□□ -0.61
TMC1-203ENST00000469455 AK7Q96M32 723 aa11.22□□□□□ -0.61
TMC1-203ENST00000469455 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
TMC1-203ENST00000469455 EEA1Q15075 1411 aa11.2□□□□□ -0.62
TMC1-203ENST00000469455 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
TMC1-203ENST00000469455 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
TMC1-203ENST00000469455 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
TMC1-203ENST00000469455 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms