RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 FGD6Q6ZV73 1430 aa11.88□□□□□ -0.51
SMARCE1-207ENST00000469334 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-207ENST00000469334 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.515e-8■■■□□ 18.8
SMARCE1-207ENST00000469334 RRAGDQ9NQL2 400 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-207ENST00000469334 CUX1P39880 1505 aa11.85□□□□□ -0.51
SMARCE1-207ENST00000469334 NAIPQ13075 1403 aa11.85□□□□□ -0.51
SMARCE1-207ENST00000469334 CLCN1P35523 988 aa11.84□□□□□ -0.51
SMARCE1-207ENST00000469334 PNNQ9H307 717 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-207ENST00000469334 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-207ENST00000469334 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
SMARCE1-207ENST00000469334 SPATA31E1Q6ZUB1 1445 aa11.83□□□□□ -0.52
SMARCE1-207ENST00000469334 MIA2Q96PC5 1412 aa11.83□□□□□ -0.52
SMARCE1-207ENST00000469334 DHX29Q7Z478 1369 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-207ENST00000469334 NAP1L5Q96NT1 182 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-207ENST00000469334 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
SMARCE1-207ENST00000469334 LRPPRCP42704 1394 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-207ENST00000469334 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
SMARCE1-207ENST00000469334 EFCAB5A4FU69 1503 aa11.81□□□□□ -0.52
SMARCE1-207ENST00000469334 KIF7Q2M1P5 1343 aa11.81□□□□□ -0.52
SMARCE1-207ENST00000469334 PDE3BQ13370 1112 aa11.81□□□□□ -0.52
SMARCE1-207ENST00000469334 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
SMARCE1-207ENST00000469334 RCAN3Q9UKA8 241 aa11.8□□□□□ -0.52
SMARCE1-207ENST00000469334 KTN1Q86UP2 1357 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-207ENST00000469334 CASKIN1Q8WXD9 1431 aa11.8□□□□□ -0.52
SMARCE1-207ENST00000469334 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-207ENST00000469334 PNISRQ8TF01 805 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-207ENST00000469334 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
SMARCE1-207ENST00000469334 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
SMARCE1-207ENST00000469334 PTPRKQ15262 1439 aa11.77□□□□□ -0.52
SMARCE1-207ENST00000469334 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-207ENST00000469334 BRD4O60885 1362 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-207ENST00000469334 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-207ENST00000469334 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-207ENST00000469334 ZMYM4Q5VZL5 1548 aa11.76□□□□□ -0.53
SMARCE1-207ENST00000469334 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
SMARCE1-207ENST00000469334 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
SMARCE1-207ENST00000469334 TPM2P07951 284 aa11.76□□□□□ -0.53
SMARCE1-207ENST00000469334 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
SMARCE1-207ENST00000469334 MYOM3Q5VTT5 1437 aa11.75□□□□□ -0.53
SMARCE1-207ENST00000469334 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
SMARCE1-207ENST00000469334 SUPT6HQ7KZ85 1726 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-207ENST00000469334 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-207ENST00000469334 INSRP06213 1382 aa11.74□□□□□ -0.53
SMARCE1-207ENST00000469334 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
SMARCE1-207ENST00000469334 CENPQQ7L2Z9 268 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-207ENST00000469334 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
SMARCE1-207ENST00000469334 PRDM2Q13029 1718 aa11.73□□□□□ -0.53
SMARCE1-207ENST00000469334 BCORL1Q5H9F3 1711 aa11.73□□□□□ -0.53
SMARCE1-207ENST00000469334 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-207ENST00000469334 POGKQ9P215 609 aa11.72□□□□□ -0.53
SMARCE1-207ENST00000469334 PLEKHH2Q8IVE3 1493 aa11.72□□□□□ -0.53
SMARCE1-207ENST00000469334 C8orf34Q49A92 452 aa11.72□□□□□ -0.53
SMARCE1-207ENST00000469334 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
SMARCE1-207ENST00000469334 E9PCH4 1651 aa11.71□□□□□ -0.53
SMARCE1-207ENST00000469334 KIF14Q15058 1648 aa11.71□□□□□ -0.53
SMARCE1-207ENST00000469334 FSD2A1L4K1 749 aa11.71□□□□□ -0.53
SMARCE1-207ENST00000469334 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.54
SMARCE1-207ENST00000469334 L3MBTL2Q969R5 705 aa11.71□□□□□ -0.54
SMARCE1-207ENST00000469334 KIF15Q9NS87 1388 aa11.71□□□□□ -0.54
SMARCE1-207ENST00000469334 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
SMARCE1-207ENST00000469334 TCOF1Q13428 1488 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-207ENST00000469334 BECN1Q14457 450 aa11.69□□□□□ -0.54
SMARCE1-207ENST00000469334 ISY1Q9ULR0 285 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-207ENST00000469334 KDM5CP41229 1560 aa11.69□□□□□ -0.54
SMARCE1-207ENST00000469334 IGF1RP08069 1367 aa11.68□□□□□ -0.54
SMARCE1-207ENST00000469334 CTTNBP2Q8WZ74 1663 aa11.68□□□□□ -0.54
SMARCE1-207ENST00000469334 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMARCE1-207ENST00000469334 MYBBP1AQ9BQG0 1328 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-207ENST00000469334 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMARCE1-207ENST00000469334 RBM10P98175 930 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-207ENST00000469334 AAMPQ13685 434 aa11.67□□□□□ -0.54
SMARCE1-207ENST00000469334 RALBP1Q15311 655 aa11.67□□□□□ -0.54
SMARCE1-207ENST00000469334 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
SMARCE1-207ENST00000469334 BICRAQ9NZM4 1560 aa11.67□□□□□ -0.54
SMARCE1-207ENST00000469334 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 MBD5Q9P267 1494 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 CRBNQ96SW2 442 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 ARHGEF11O15085 1522 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 UGGT2Q9NYU1 1516 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 MAP7D2Q96T17 732 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 PRDM4Q9UKN5 801 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
SMARCE1-207ENST00000469334 MRE11P49959 708 aa11.65□□□□□ -0.54
SMARCE1-207ENST00000469334 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
SMARCE1-207ENST00000469334 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.54
SMARCE1-207ENST00000469334 LRRIQ1Q96JM4 1722 aa11.65□□□□□ -0.54
SMARCE1-207ENST00000469334 NBPF8Q3BBV2 869 aa11.65□□□□□ -0.55
SMARCE1-207ENST00000469334 CCDC144AA2RUR9 1427 aa11.64□□□□□ -0.55
SMARCE1-207ENST00000469334 ESPNB1AK53 854 aa11.64□□□□□ -0.55
SMARCE1-207ENST00000469334 FHOD3Q2V2M9 1422 aa11.64□□□□□ -0.55
SMARCE1-207ENST00000469334 KDM6BO15054 1643 aa11.64□□□□□ -0.55
SMARCE1-207ENST00000469334 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-207ENST00000469334 TERF1P54274 439 aa11.63□□□□□ -0.55
SMARCE1-207ENST00000469334 FGD1P98174 961 aa11.63□□□□□ -0.55
SMARCE1-207ENST00000469334 MPHOSPH9Q99550 1183 aa11.63□□□□□ -0.55
SMARCE1-207ENST00000469334 USP47Q96K76 1375 aa11.62□□□□□ -0.55
SMARCE1-207ENST00000469334 ANTXR1Q9H6X2 564 aa11.6□□□□□ -0.55
SMARCE1-207ENST00000469334 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
SMARCE1-207ENST00000469334 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-207ENST00000469334 ZMYM3Q14202 1370 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms