RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 BCL11AQ9H165 835 aa24.03■■□□□ 1.44
TRIM46-207ENST00000468878 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
TRIM46-207ENST00000468878 ANP32EQ9BTT0 268 aa24■■□□□ 1.43
TRIM46-207ENST00000468878 PTPN23Q9H3S7 1636 aa24■■□□□ 1.43
TRIM46-207ENST00000468878 IQGAP2Q13576 1575 aa24■■□□□ 1.43
TRIM46-207ENST00000468878 TSHZ2Q9NRE2 1034 aa24■■□□□ 1.43
TRIM46-207ENST00000468878 SUPT6HQ7KZ85 1726 aaKnown RBP23.99■■□□□ 1.43
TRIM46-207ENST00000468878 CCER2I3L3R5 266 aa23.99■■□□□ 1.43
TRIM46-207ENST00000468878 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
TRIM46-207ENST00000468878 PLB1Q6P1J6 1458 aa23.98■■□□□ 1.43
TRIM46-207ENST00000468878 EHBP1L1Q8N3D4 1523 aa23.98■■□□□ 1.43
TRIM46-207ENST00000468878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.96■■□□□ 1.43
TRIM46-207ENST00000468878 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.42
TRIM46-207ENST00000468878 NUP155O75694 1391 aa23.92■■□□□ 1.42
TRIM46-207ENST00000468878 CARD11Q9BXL7 1154 aa23.92■■□□□ 1.42
TRIM46-207ENST00000468878 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
TRIM46-207ENST00000468878 UGGT2Q9NYU1 1516 aa23.88■■□□□ 1.41
TRIM46-207ENST00000468878 TARBP1Q13395 1621 aaKnown RBP23.87■■□□□ 1.41
TRIM46-207ENST00000468878 KDM6BO15054 1643 aa23.86■■□□□ 1.41
TRIM46-207ENST00000468878 SAMD9Q5K651 1589 aa23.86■■□□□ 1.41
TRIM46-207ENST00000468878 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
TRIM46-207ENST00000468878 DAPK1P53355 1430 aa23.85■■□□□ 1.41
TRIM46-207ENST00000468878 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
TRIM46-207ENST00000468878 ABCC5O15440 1437 aa23.85■■□□□ 1.41
TRIM46-207ENST00000468878 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
TRIM46-207ENST00000468878 CARMIL2Q6F5E8 1435 aa23.83■■□□□ 1.41
TRIM46-207ENST00000468878 LRRIQ1Q96JM4 1722 aa23.83■■□□□ 1.4
TRIM46-207ENST00000468878 KIF7Q2M1P5 1343 aa23.83■■□□□ 1.4
TRIM46-207ENST00000468878 KIAA0586Q9BVV6 1533 aa23.82■■□□□ 1.4
TRIM46-207ENST00000468878 TMC1Q8TDI8 760 aa23.81■■□□□ 1.4
TRIM46-207ENST00000468878 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
TRIM46-207ENST00000468878 B4GALNT3Q6L9W6 998 aa23.81■■□□□ 1.4
TRIM46-207ENST00000468878 NUP153P49790 1475 aaKnown RBP23.8■■□□□ 1.4
TRIM46-207ENST00000468878 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
TRIM46-207ENST00000468878 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
TRIM46-207ENST00000468878 ANKRD30AQ9BXX3 1397 aa23.76■■□□□ 1.39
TRIM46-207ENST00000468878 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
TRIM46-207ENST00000468878 CCDC7Q96M83 1385 aa23.76■■□□□ 1.39
TRIM46-207ENST00000468878 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
TRIM46-207ENST00000468878 ANKRD30BQ9BXX2 1392 aa23.74■■□□□ 1.39
TRIM46-207ENST00000468878 DISP1Q96F81 1524 aa23.74■■□□□ 1.39
TRIM46-207ENST00000468878 TROQ12816 1431 aaPredicted RBP23.71■■□□□ 1.39
TRIM46-207ENST00000468878 WDR62O43379 1518 aa23.71■■□□□ 1.39
TRIM46-207ENST00000468878 PTPRGP23470 1445 aa23.7■■□□□ 1.39
TRIM46-207ENST00000468878 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
TRIM46-207ENST00000468878 ANKRD50Q9ULJ7 1429 aa23.69■■□□□ 1.38
TRIM46-207ENST00000468878 ERICH6Q7L0X2 663 aa23.69■■□□□ 1.38
TRIM46-207ENST00000468878 RBM19Q9Y4C8 960 aaKnown RBP23.69■■□□□ 1.38
TRIM46-207ENST00000468878 USP47Q96K76 1375 aa23.68■■□□□ 1.38
TRIM46-207ENST00000468878 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
TRIM46-207ENST00000468878 DENND4BO75064 1496 aaPredicted RBP23.66■■□□□ 1.38
TRIM46-207ENST00000468878 CAMSAP2Q08AD1 1489 aa23.66■■□□□ 1.38
TRIM46-207ENST00000468878 NCOA1Q15788 1441 aa23.64■■□□□ 1.37
TRIM46-207ENST00000468878 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
TRIM46-207ENST00000468878 CNTLNQ9NXG0 1405 aa23.63■■□□□ 1.37
TRIM46-207ENST00000468878 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
TRIM46-207ENST00000468878 KIAA0556O60303 1618 aa23.62■■□□□ 1.37
TRIM46-207ENST00000468878 NBPF1Q3BBV0 1214 aa23.62■■□□□ 1.37
TRIM46-207ENST00000468878 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
TRIM46-207ENST00000468878 GPATCH8Q9UKJ3 1502 aaKnown RBP23.61■■□□□ 1.37
TRIM46-207ENST00000468878 TCOF1Q13428 1488 aaKnown RBP23.61■■□□□ 1.37
TRIM46-207ENST00000468878 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
TRIM46-207ENST00000468878 AKNAQ7Z591 1439 aa23.58■■□□□ 1.36
TRIM46-207ENST00000468878 RAPGEF6Q8TEU7 1601 aa23.58■■□□□ 1.36
TRIM46-207ENST00000468878 ROCK2O75116 1388 aaKnown RBP23.57■■□□□ 1.36
TRIM46-207ENST00000468878 RPRD2Q5VT52 1461 aaKnown RBP23.55■■□□□ 1.36
TRIM46-207ENST00000468878 C9orf84Q5VXU9 1444 aa23.55■■□□□ 1.36
TRIM46-207ENST00000468878 ROCK1Q13464 1354 aa23.54■■□□□ 1.36
TRIM46-207ENST00000468878 KIF14Q15058 1648 aa23.54■■□□□ 1.36
TRIM46-207ENST00000468878 KIAA1107Q9UPP5 1409 aa23.53■■□□□ 1.36
TRIM46-207ENST00000468878 AFAP1Q8N556 730 aa23.51■■□□□ 1.35
TRIM46-207ENST00000468878 ATP10BO94823 1461 aa23.51■■□□□ 1.35
TRIM46-207ENST00000468878 CCDC136Q96JN2 1154 aa23.51■■□□□ 1.35
TRIM46-207ENST00000468878 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
TRIM46-207ENST00000468878 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
TRIM46-207ENST00000468878 KDM5BQ9UGL1 1544 aa23.46■■□□□ 1.35
TRIM46-207ENST00000468878 PPP4R2Q9NY27 417 aa23.46■■□□□ 1.35
TRIM46-207ENST00000468878 PZPP20742 1482 aa23.45■■□□□ 1.35
TRIM46-207ENST00000468878 NPM2Q86SE8 214 aaKnown RBP23.42■■□□□ 1.34
TRIM46-207ENST00000468878 CCDC144AA2RUR9 1427 aa23.41■■□□□ 1.34
TRIM46-207ENST00000468878 ZBED9Q6R2W3 1325 aa23.4■■□□□ 1.34
TRIM46-207ENST00000468878 DNMT1P26358 1616 aaKnown RBP23.39■■□□□ 1.33
TRIM46-207ENST00000468878 TEX14Q8IWB6 1497 aa23.39■■□□□ 1.33
TRIM46-207ENST00000468878 EFCAB2Q5VUJ9 269 aa23.38■■□□□ 1.33
TRIM46-207ENST00000468878 PANK3Q9H999 370 aa23.38■■□□□ 1.33
TRIM46-207ENST00000468878 KIF3BO15066 747 aa23.37■■□□□ 1.33
TRIM46-207ENST00000468878 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
TRIM46-207ENST00000468878 ARHGAP5Q13017 1502 aa23.36■■□□□ 1.33
TRIM46-207ENST00000468878 NUTM2DQ5VT03 806 aaPredicted RBP23.36■■□□□ 1.33
TRIM46-207ENST00000468878 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
TRIM46-207ENST00000468878 PLIN1O60240 522 aa23.33■■□□□ 1.32
TRIM46-207ENST00000468878 SPAG9O60271 1321 aaKnown RBP23.32■■□□□ 1.32
TRIM46-207ENST00000468878 CDCA7LQ96GN5 454 aa23.31■■□□□ 1.32
TRIM46-207ENST00000468878 NUDCQ9Y266 331 aa23.31■■□□□ 1.32
TRIM46-207ENST00000468878 PNISRQ8TF01 805 aaKnown RBP23.31■■□□□ 1.32
TRIM46-207ENST00000468878 GGT6Q6P531 493 aa23.3■■□□□ 1.32
TRIM46-207ENST00000468878 NUP160Q12769 1436 aa23.29■■□□□ 1.32
TRIM46-207ENST00000468878 TMF1P82094 1093 aa23.27■■□□□ 1.32
TRIM46-207ENST00000468878 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
TRIM46-207ENST00000468878 KNSTRNQ9Y448 316 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms