RNA–Protein interactions for RNA: ENST00000468475.1

POLR1B-211, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 569 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-211ENST00000468475 ZFYVE16Q7Z3T8 1539 aa12.66□□□□□ -0.38
POLR1B-211ENST00000468475 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
POLR1B-211ENST00000468475 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
POLR1B-211ENST00000468475 UHRF1BP1Q6BDS2 1440 aa12.64□□□□□ -0.39
POLR1B-211ENST00000468475 ARHGEF12Q9NZN5 1544 aa12.64□□□□□ -0.39
POLR1B-211ENST00000468475 ARID3CA6NKF2 412 aa12.64□□□□□ -0.39
POLR1B-211ENST00000468475 MLECQ14165 292 aa12.64□□□□□ -0.39
POLR1B-211ENST00000468475 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
POLR1B-211ENST00000468475 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
POLR1B-211ENST00000468475 HECW1Q76N89 1606 aa12.58□□□□□ -0.4
POLR1B-211ENST00000468475 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
POLR1B-211ENST00000468475 RAPGEF6Q8TEU7 1601 aa12.56□□□□□ -0.4
POLR1B-211ENST00000468475 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
POLR1B-211ENST00000468475 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
POLR1B-211ENST00000468475 ATP10AO60312 1499 aa12.55□□□□□ -0.4
POLR1B-211ENST00000468475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
POLR1B-211ENST00000468475 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
POLR1B-211ENST00000468475 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
POLR1B-211ENST00000468475 C3P01024 1663 aa12.51□□□□□ -0.41
POLR1B-211ENST00000468475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.51□□□□□ -0.41
POLR1B-211ENST00000468475 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
POLR1B-211ENST00000468475 NUP153P49790 1475 aaKnown RBP12.49□□□□□ -0.41
POLR1B-211ENST00000468475 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
POLR1B-211ENST00000468475 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
POLR1B-211ENST00000468475 TRAPPC8Q9Y2L5 1435 aa12.48□□□□□ -0.41
POLR1B-211ENST00000468475 SAMD9Q5K651 1589 aa12.47□□□□□ -0.41
POLR1B-211ENST00000468475 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
POLR1B-211ENST00000468475 HSPA1LP34931 641 aa12.46□□□□□ -0.41
POLR1B-211ENST00000468475 CAMSAP1Q5T5Y3 1602 aa12.46□□□□□ -0.41
POLR1B-211ENST00000468475 PRXQ9BXM0 1461 aa12.44□□□□□ -0.42
POLR1B-211ENST00000468475 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
POLR1B-211ENST00000468475 PLCH2O75038 1416 aa12.43□□□□□ -0.42
POLR1B-211ENST00000468475 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
POLR1B-211ENST00000468475 AGLP35573 1532 aa12.41□□□□□ -0.42
POLR1B-211ENST00000468475 ZNF518AQ6AHZ1 1483 aa12.4□□□□□ -0.42
POLR1B-211ENST00000468475 SCAF1Q9H7N4 1312 aaKnown RBP12.4□□□□□ -0.42
POLR1B-211ENST00000468475 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
POLR1B-211ENST00000468475 KDM5CP41229 1560 aa12.39□□□□□ -0.43
POLR1B-211ENST00000468475 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
POLR1B-211ENST00000468475 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
POLR1B-211ENST00000468475 TOM1O60784 492 aa12.39□□□□□ -0.43
POLR1B-211ENST00000468475 PKD2Q13563 968 aa12.39□□□□□ -0.43
POLR1B-211ENST00000468475 PLA2R1Q13018 1463 aa12.39□□□□□ -0.43
POLR1B-211ENST00000468475 NPATQ14207 1427 aa12.38□□□□□ -0.43
POLR1B-211ENST00000468475 PIP4K2BP78356 416 aa12.38□□□□□ -0.43
POLR1B-211ENST00000468475 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
POLR1B-211ENST00000468475 MYO5CQ9NQX4 1742 aa12.37□□□□□ -0.43
POLR1B-211ENST00000468475 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
POLR1B-211ENST00000468475 MROH2AA6NES4 1674 aa12.36□□□□□ -0.43
POLR1B-211ENST00000468475 ZNF142P52746 1687 aaPredicted RBP12.36□□□□□ -0.43
POLR1B-211ENST00000468475 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
POLR1B-211ENST00000468475 ABCA6Q8N139 1617 aa12.35□□□□□ -0.43
POLR1B-211ENST00000468475 CPS1P31327 1500 aa12.34□□□□□ -0.43
POLR1B-211ENST00000468475 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
POLR1B-211ENST00000468475 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
POLR1B-211ENST00000468475 MLH3Q9UHC1 1453 aa12.33□□□□□ -0.44
POLR1B-211ENST00000468475 MYO3AQ8NEV4 1616 aa12.32□□□□□ -0.44
POLR1B-211ENST00000468475 POTEDQ86YR6 584 aa12.31□□□□□ -0.44
POLR1B-211ENST00000468475 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
POLR1B-211ENST00000468475 PTPRKQ15262 1439 aa12.3□□□□□ -0.44
POLR1B-211ENST00000468475 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
POLR1B-211ENST00000468475 CDK13Q14004 1512 aaKnown RBP12.29□□□□□ -0.44
POLR1B-211ENST00000468475 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
POLR1B-211ENST00000468475 RGS17Q9UGC6 210 aaPredicted RBP12.28□□□□□ -0.44
POLR1B-211ENST00000468475 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.45
POLR1B-211ENST00000468475 ALKQ9UM73 1620 aa12.26□□□□□ -0.45
POLR1B-211ENST00000468475 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
POLR1B-211ENST00000468475 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
POLR1B-211ENST00000468475 KIF14Q15058 1648 aa12.24□□□□□ -0.45
POLR1B-211ENST00000468475 CLTCQ00610 1675 aaKnown RBP12.23□□□□□ -0.45
POLR1B-211ENST00000468475 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
POLR1B-211ENST00000468475 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
POLR1B-211ENST00000468475 CDK11AQ9UQ88 783 aaPredicted RBP12.22□□□□□ -0.45
POLR1B-211ENST00000468475 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
POLR1B-211ENST00000468475 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
POLR1B-211ENST00000468475 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
POLR1B-211ENST00000468475 ABCC1P33527 1531 aa12.21□□□□□ -0.45
POLR1B-211ENST00000468475 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.45
POLR1B-211ENST00000468475 VWDEQ8N2E2 1590 aa12.2□□□□□ -0.46
POLR1B-211ENST00000468475 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
POLR1B-211ENST00000468475 TROQ12816 1431 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-211ENST00000468475 RNF17Q9BXT8 1623 aaKnown RBP12.18□□□□□ -0.46
POLR1B-211ENST00000468475 PREX2Q70Z35 1606 aa12.17□□□□□ -0.46
POLR1B-211ENST00000468475 CLIP1P30622 1438 aa12.17□□□□□ -0.46
POLR1B-211ENST00000468475 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
POLR1B-211ENST00000468475 SETD1AO15047 1707 aaKnown RBP12.15□□□□□ -0.46
POLR1B-211ENST00000468475 SYNMO15061 1565 aa12.14□□□□□ -0.47
POLR1B-211ENST00000468475 SAMD9LQ8IVG5 1584 aa12.14□□□□□ -0.47
POLR1B-211ENST00000468475 PLXNC1O60486 1568 aa12.13□□□□□ -0.47
POLR1B-211ENST00000468475 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
POLR1B-211ENST00000468475 MED14O60244 1454 aa12.13□□□□□ -0.47
POLR1B-211ENST00000468475 LRRC7Q96NW7 1537 aa12.12□□□□□ -0.47
POLR1B-211ENST00000468475 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
POLR1B-211ENST00000468475 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-211ENST00000468475 STRCP1A6NGW2 1772 aa12.12□□□□□ -0.47
POLR1B-211ENST00000468475 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
POLR1B-211ENST00000468475 NPHP4O75161 1426 aaPredicted RBP12.11□□□□□ -0.47
POLR1B-211ENST00000468475 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
POLR1B-211ENST00000468475 A2MP01023 1474 aa12.1□□□□□ -0.47
POLR1B-211ENST00000468475 GGT6Q6P531 493 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms