RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 GRIN2BQ13224 1484 aa12.45□□□□□ -0.42
LCA5-203ENST00000467898 PPM1GO15355 546 aaPredicted RBP12.44□□□□□ -0.42
LCA5-203ENST00000467898 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
LCA5-203ENST00000467898 EIF4G3O43432 1585 aaKnown RBP12.44□□□□□ -0.42
LCA5-203ENST00000467898 GSE1Q14687 1217 aa12.44□□□□□ -0.42
LCA5-203ENST00000467898 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
LCA5-203ENST00000467898 NAP1L5Q96NT1 182 aaPredicted RBP12.43□□□□□ -0.42
LCA5-203ENST00000467898 PRDM4Q9UKN5 801 aa12.42□□□□□ -0.42
LCA5-203ENST00000467898 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
LCA5-203ENST00000467898 IPO4Q8TEX9 1081 aaKnown RBP12.41□□□□□ -0.42
LCA5-203ENST00000467898 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
LCA5-203ENST00000467898 CCNB3Q8WWL7 1395 aa12.41□□□□□ -0.42
LCA5-203ENST00000467898 AEBP2Q6ZN18 517 aaPredicted RBP12.4□□□□□ -0.42
LCA5-203ENST00000467898 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
LCA5-203ENST00000467898 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
LCA5-203ENST00000467898 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
LCA5-203ENST00000467898 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
LCA5-203ENST00000467898 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
LCA5-203ENST00000467898 UGGT2Q9NYU1 1516 aa12.36□□□□□ -0.43
LCA5-203ENST00000467898 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
LCA5-203ENST00000467898 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
LCA5-203ENST00000467898 CCER2I3L3R5 266 aa12.33□□□□□ -0.44
LCA5-203ENST00000467898 PDCL3Q9H2J4 239 aa12.33□□□□□ -0.44
LCA5-203ENST00000467898 GRIN2AQ12879 1464 aa12.33□□□□□ -0.44
LCA5-203ENST00000467898 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
LCA5-203ENST00000467898 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
LCA5-203ENST00000467898 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
LCA5-203ENST00000467898 KIAA0586Q9BVV6 1533 aa12.31□□□□□ -0.44
LCA5-203ENST00000467898 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
LCA5-203ENST00000467898 MAGI3Q5TCQ9 1506 aa12.31□□□□□ -0.44
LCA5-203ENST00000467898 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
LCA5-203ENST00000467898 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
LCA5-203ENST00000467898 HECW1Q76N89 1606 aa12.3□□□□□ -0.44
LCA5-203ENST00000467898 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
LCA5-203ENST00000467898 DISP1Q96F81 1524 aa12.3□□□□□ -0.44
LCA5-203ENST00000467898 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
LCA5-203ENST00000467898 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
LCA5-203ENST00000467898 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
LCA5-203ENST00000467898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.29□□□□□ -0.44
LCA5-203ENST00000467898 SYNJ2O15056 1496 aa12.28□□□□□ -0.44
LCA5-203ENST00000467898 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
LCA5-203ENST00000467898 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.44
LCA5-203ENST00000467898 ATP1B4Q9UN42 357 aaPredicted RBP12.27□□□□□ -0.45
LCA5-203ENST00000467898 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
LCA5-203ENST00000467898 BCCIPQ9P287 314 aaKnown RBP eCLIP12.25□□□□□ -0.45
LCA5-203ENST00000467898 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
LCA5-203ENST00000467898 NCOA2Q15596 1464 aa12.25□□□□□ -0.45
LCA5-203ENST00000467898 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
LCA5-203ENST00000467898 TEX2Q8IWB9 1127 aa12.25□□□□□ -0.45
LCA5-203ENST00000467898 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
LCA5-203ENST00000467898 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
LCA5-203ENST00000467898 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
LCA5-203ENST00000467898 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
LCA5-203ENST00000467898 ARID4BQ4LE39 1312 aaPredicted RBP12.23□□□□□ -0.45
LCA5-203ENST00000467898 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
LCA5-203ENST00000467898 NUP160Q12769 1436 aa12.23□□□□□ -0.45
LCA5-203ENST00000467898 MTUS2Q5JR59 1369 aa12.23□□□□□ -0.45
LCA5-203ENST00000467898 CLCN1P35523 988 aa12.23□□□□□ -0.45
LCA5-203ENST00000467898 RGS3P49796 1198 aa12.22□□□□□ -0.45
LCA5-203ENST00000467898 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
LCA5-203ENST00000467898 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
LCA5-203ENST00000467898 FTSJ3Q8IY81 847 aaKnown RBP12.22□□□□□ -0.45
LCA5-203ENST00000467898 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
LCA5-203ENST00000467898 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
LCA5-203ENST00000467898 TPM2P07951 284 aa12.21□□□□□ -0.45
LCA5-203ENST00000467898 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
LCA5-203ENST00000467898 RAPGEF6Q8TEU7 1601 aa12.21□□□□□ -0.45
LCA5-203ENST00000467898 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
LCA5-203ENST00000467898 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
LCA5-203ENST00000467898 PTPN23Q9H3S7 1636 aa12.2□□□□□ -0.46
LCA5-203ENST00000467898 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
LCA5-203ENST00000467898 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
LCA5-203ENST00000467898 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
LCA5-203ENST00000467898 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
LCA5-203ENST00000467898 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
LCA5-203ENST00000467898 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
LCA5-203ENST00000467898 PTPRKQ15262 1439 aa12.19□□□□□ -0.46
LCA5-203ENST00000467898 TCOF1Q13428 1488 aaKnown RBP12.18□□□□□ -0.46
LCA5-203ENST00000467898 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
LCA5-203ENST00000467898 MAP7D2Q96T17 732 aa12.18□□□□□ -0.46
LCA5-203ENST00000467898 CHMP7Q8WUX9 453 aaPredicted RBP12.16□□□□□ -0.46
LCA5-203ENST00000467898 UTP14CQ5TAP6 766 aaKnown RBP12.15□□□□□ -0.46
LCA5-203ENST00000467898 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
LCA5-203ENST00000467898 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
LCA5-203ENST00000467898 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
LCA5-203ENST00000467898 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
LCA5-203ENST00000467898 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
LCA5-203ENST00000467898 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
LCA5-203ENST00000467898 CHD1O14646 1710 aa12.13□□□□□ -0.47
LCA5-203ENST00000467898 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
LCA5-203ENST00000467898 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
LCA5-203ENST00000467898 NFKBIBQ15653 356 aa12.12□□□□□ -0.47
LCA5-203ENST00000467898 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
LCA5-203ENST00000467898 ADCY10Q96PN6 1610 aa12.11□□□□□ -0.47
LCA5-203ENST00000467898 GCC2Q8IWJ2 1684 aa12.11□□□□□ -0.47
LCA5-203ENST00000467898 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
LCA5-203ENST00000467898 PLB1Q6P1J6 1458 aa12.11□□□□□ -0.47
LCA5-203ENST00000467898 ABCA8O94911 1581 aa12.11□□□□□ -0.47
LCA5-203ENST00000467898 NAIPQ13075 1403 aa12.09□□□□□ -0.47
LCA5-203ENST00000467898 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms