RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 CDC42BPAQ5VT25 1732 aa17.97■□□□□ 0.47
LAMP3-202ENST00000466939 ZNF777Q9ULD5 760 aaPredicted RBP17.96■□□□□ 0.47
LAMP3-202ENST00000466939 ZNF644Q9H582 1327 aaPredicted RBP17.96■□□□□ 0.47
LAMP3-202ENST00000466939 CHIC2Q9UKJ5 165 aa17.95■□□□□ 0.46
LAMP3-202ENST00000466939 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
LAMP3-202ENST00000466939 NAIPQ13075 1403 aa17.94■□□□□ 0.46
LAMP3-202ENST00000466939 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
LAMP3-202ENST00000466939 ABCC5O15440 1437 aa17.93■□□□□ 0.46
LAMP3-202ENST00000466939 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
LAMP3-202ENST00000466939 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
LAMP3-202ENST00000466939 PREX2Q70Z35 1606 aa17.91■□□□□ 0.46
LAMP3-202ENST00000466939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.89■□□□□ 0.46
LAMP3-202ENST00000466939 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
LAMP3-202ENST00000466939 ROCK1Q13464 1354 aa17.88■□□□□ 0.45
LAMP3-202ENST00000466939 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
LAMP3-202ENST00000466939 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
LAMP3-202ENST00000466939 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
LAMP3-202ENST00000466939 MYO5CQ9NQX4 1742 aa17.86■□□□□ 0.45
LAMP3-202ENST00000466939 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
LAMP3-202ENST00000466939 CDC42BPBQ9Y5S2 1711 aa17.84■□□□□ 0.45
LAMP3-202ENST00000466939 WDR7Q9Y4E6 1490 aa17.84■□□□□ 0.45
LAMP3-202ENST00000466939 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.44
LAMP3-202ENST00000466939 ARHGEF5Q12774 1597 aa17.82■□□□□ 0.44
LAMP3-202ENST00000466939 SHANK2Q9UPX8 1470 aa17.81■□□□□ 0.44
LAMP3-202ENST00000466939 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
LAMP3-202ENST00000466939 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
LAMP3-202ENST00000466939 KDM6BO15054 1643 aa17.8■□□□□ 0.44
LAMP3-202ENST00000466939 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
LAMP3-202ENST00000466939 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
LAMP3-202ENST00000466939 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
LAMP3-202ENST00000466939 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
LAMP3-202ENST00000466939 PLEKHH2Q8IVE3 1493 aa17.78■□□□□ 0.44
LAMP3-202ENST00000466939 PLCH2O75038 1416 aa17.78■□□□□ 0.44
LAMP3-202ENST00000466939 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
LAMP3-202ENST00000466939 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
LAMP3-202ENST00000466939 HNRNPMP52272 730 aaKnown RBP eCLIP17.77■□□□□ 0.44
LAMP3-202ENST00000466939 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.44
LAMP3-202ENST00000466939 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.43
LAMP3-202ENST00000466939 NCOA1Q15788 1441 aa17.77■□□□□ 0.43
LAMP3-202ENST00000466939 TSPY4P0CV99 314 aa17.76■□□□□ 0.43
LAMP3-202ENST00000466939 TSPY10P0CW01 314 aa17.76■□□□□ 0.43
LAMP3-202ENST00000466939 MBD5Q9P267 1494 aa17.76■□□□□ 0.43
LAMP3-202ENST00000466939 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
LAMP3-202ENST00000466939 RSPH4AQ5TD94 716 aa17.74■□□□□ 0.43
LAMP3-202ENST00000466939 ARAP3Q8WWN8 1544 aa17.73■□□□□ 0.43
LAMP3-202ENST00000466939 KIAA1107Q9UPP5 1409 aa17.72■□□□□ 0.43
LAMP3-202ENST00000466939 ABCA9Q8IUA7 1624 aa17.72■□□□□ 0.43
LAMP3-202ENST00000466939 ABCC1P33527 1531 aa17.7■□□□□ 0.42
LAMP3-202ENST00000466939 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
LAMP3-202ENST00000466939 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
LAMP3-202ENST00000466939 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
LAMP3-202ENST00000466939 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
LAMP3-202ENST00000466939 MAST1Q9Y2H9 1570 aa17.69■□□□□ 0.42
LAMP3-202ENST00000466939 SIN3AQ96ST3 1273 aa17.69■□□□□ 0.42
LAMP3-202ENST00000466939 KIF15Q9NS87 1388 aa17.68■□□□□ 0.42
LAMP3-202ENST00000466939 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
LAMP3-202ENST00000466939 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
LAMP3-202ENST00000466939 ARHGEF12Q9NZN5 1544 aa17.66■□□□□ 0.42
LAMP3-202ENST00000466939 FANCAO15360 1455 aa17.64■□□□□ 0.41
LAMP3-202ENST00000466939 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
LAMP3-202ENST00000466939 PLXNC1O60486 1568 aa17.62■□□□□ 0.41
LAMP3-202ENST00000466939 DENND4BO75064 1496 aaPredicted RBP17.62■□□□□ 0.41
LAMP3-202ENST00000466939 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
LAMP3-202ENST00000466939 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
LAMP3-202ENST00000466939 TRAPPC8Q9Y2L5 1435 aa17.61■□□□□ 0.41
LAMP3-202ENST00000466939 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
LAMP3-202ENST00000466939 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
LAMP3-202ENST00000466939 PZPP20742 1482 aa17.6■□□□□ 0.41
LAMP3-202ENST00000466939 ADGRL1O94910 1474 aa17.59■□□□□ 0.41
LAMP3-202ENST00000466939 CD109Q6YHK3 1445 aa17.57■□□□□ 0.4
LAMP3-202ENST00000466939 CFAP74Q9C0B2 1584 aa17.57■□□□□ 0.4
LAMP3-202ENST00000466939 DUOX2Q9NRD8 1548 aa17.56■□□□□ 0.4
LAMP3-202ENST00000466939 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
LAMP3-202ENST00000466939 KDM5DQ9BY66 1539 aa17.55■□□□□ 0.4
LAMP3-202ENST00000466939 NUP155O75694 1391 aa17.55■□□□□ 0.4
LAMP3-202ENST00000466939 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
LAMP3-202ENST00000466939 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
LAMP3-202ENST00000466939 ZFYVE16Q7Z3T8 1539 aa17.53■□□□□ 0.4
LAMP3-202ENST00000466939 ANKRD30BQ9BXX2 1392 aa17.52■□□□□ 0.4
LAMP3-202ENST00000466939 AFAP1Q8N556 730 aa17.52■□□□□ 0.4
LAMP3-202ENST00000466939 ERBINQ96RT1 1412 aa17.52■□□□□ 0.39
LAMP3-202ENST00000466939 UNC13BO14795 1591 aa17.51■□□□□ 0.39
LAMP3-202ENST00000466939 ATP7AQ04656 1500 aa17.5■□□□□ 0.39
LAMP3-202ENST00000466939 INO80Q9ULG1 1556 aaPredicted RBP17.5■□□□□ 0.39
LAMP3-202ENST00000466939 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
LAMP3-202ENST00000466939 PKD2Q13563 968 aa17.5■□□□□ 0.39
LAMP3-202ENST00000466939 MYT1LQ9UL68 1186 aa17.5■□□□□ 0.39
LAMP3-202ENST00000466939 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
LAMP3-202ENST00000466939 GLI2P10070 1586 aa17.47■□□□□ 0.39
LAMP3-202ENST00000466939 RPRD2Q5VT52 1461 aaKnown RBP17.46■□□□□ 0.39
LAMP3-202ENST00000466939 ZNF518AQ6AHZ1 1483 aa17.46■□□□□ 0.39
LAMP3-202ENST00000466939 NEO1Q92859 1461 aa17.46■□□□□ 0.39
LAMP3-202ENST00000466939 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
LAMP3-202ENST00000466939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
LAMP3-202ENST00000466939 MAP3K4Q9Y6R4 1608 aa17.45■□□□□ 0.38
LAMP3-202ENST00000466939 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
LAMP3-202ENST00000466939 IQGAP3Q86VI3 1631 aa17.43■□□□□ 0.38
LAMP3-202ENST00000466939 MAGI2Q86UL8 1455 aa17.42■□□□□ 0.38
LAMP3-202ENST00000466939 DIP2BQ9P265 1576 aa17.42■□□□□ 0.38
LAMP3-202ENST00000466939 KDM5CP41229 1560 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms