RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 PCGF6Q9BYE7 350 aa9.02□□□□□ -0.97
TRA2B-209ENST00000466832 PLB1Q6P1J6 1458 aa9.01□□□□□ -0.97
TRA2B-209ENST00000466832 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
TRA2B-209ENST00000466832 ZNF692Q9BU19 519 aaPredicted RBP9□□□□□ -0.97
TRA2B-209ENST00000466832 ABCB7O75027 752 aa8.99□□□□□ -0.97
TRA2B-209ENST00000466832 MAP3K4Q9Y6R4 1608 aa8.99□□□□□ -0.97
TRA2B-209ENST00000466832 TSHZ2Q9NRE2 1034 aa8.99□□□□□ -0.97
TRA2B-209ENST00000466832 CEP162Q5TB80 1403 aa8.98□□□□□ -0.97
TRA2B-209ENST00000466832 HSPA2P54652 639 aa8.98□□□□□ -0.97
TRA2B-209ENST00000466832 C1QBPQ07021 282 aaKnown RBP8.97□□□□□ -0.97
TRA2B-209ENST00000466832 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.97
TRA2B-209ENST00000466832 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
TRA2B-209ENST00000466832 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
TRA2B-209ENST00000466832 SPDYE2Q495Y8 402 aa8.96□□□□□ -0.98
TRA2B-209ENST00000466832 MIER1Q8N108 512 aa8.94□□□□□ -0.98
TRA2B-209ENST00000466832 YEATS2Q9ULM3 1422 aa8.94□□□□□ -0.98
TRA2B-209ENST00000466832 FGD5Q6ZNL6 1462 aa8.93□□□□□ -0.98
TRA2B-209ENST00000466832 BCORL1Q5H9F3 1711 aa8.93□□□□□ -0.98
TRA2B-209ENST00000466832 CHGAP10645 457 aaKnown RBP8.93□□□□□ -0.98
TRA2B-209ENST00000466832 FAM9AQ8IZU1 332 aaPredicted RBP8.93□□□□□ -0.98
TRA2B-209ENST00000466832 JPH4Q96JJ6 628 aa8.93□□□□□ -0.98
TRA2B-209ENST00000466832 ASXL2Q76L83 1435 aa8.92□□□□□ -0.98
TRA2B-209ENST00000466832 CUX1P39880 1505 aa8.92□□□□□ -0.98
TRA2B-209ENST00000466832 MADDQ8WXG6 1647 aa8.92□□□□□ -0.98
TRA2B-209ENST00000466832 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
TRA2B-209ENST00000466832 CFAP43Q8NDM7 1665 aa8.91□□□□□ -0.98
TRA2B-209ENST00000466832 PRXQ9BXM0 1461 aa8.91□□□□□ -0.98
TRA2B-209ENST00000466832 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
TRA2B-209ENST00000466832 ADAMTS12P58397 1594 aa8.91□□□□□ -0.98
TRA2B-209ENST00000466832 PTPRTO14522 1441 aa8.91□□□□□ -0.98
TRA2B-209ENST00000466832 LTBP4Q8N2S1 1624 aa8.9□□□□□ -0.98
TRA2B-209ENST00000466832 ABCA5Q8WWZ7 1642 aa8.9□□□□□ -0.98
TRA2B-209ENST00000466832 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
TRA2B-209ENST00000466832 ABCC2Q92887 1545 aa8.89□□□□□ -0.99
TRA2B-209ENST00000466832 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
TRA2B-209ENST00000466832 EPRSP07814 1512 aaKnown RBP8.88□□□□□ -0.99
TRA2B-209ENST00000466832 PLEKHG5O94827 1062 aa8.88□□□□□ -0.99
TRA2B-209ENST00000466832 NBR1Q14596 966 aa8.88□□□□□ -0.99
TRA2B-209ENST00000466832 KIF27Q86VH2 1401 aa8.87□□□□□ -0.99
TRA2B-209ENST00000466832 HS6ST3Q8IZP7 471 aa8.87□□□□□ -0.99
TRA2B-209ENST00000466832 RIMS1Q86UR5 1692 aaKnown RBP8.87□□□□□ -0.99
TRA2B-209ENST00000466832 VPS8Q8N3P4 1428 aa8.87□□□□□ -0.99
TRA2B-209ENST00000466832 STRCQ7RTU9 1775 aa8.86□□□□□ -0.99
TRA2B-209ENST00000466832 UBAP1LF5GYI3 381 aa8.86□□□□□ -0.99
TRA2B-209ENST00000466832 FHAD1B1AJZ9 1412 aa8.86□□□□□ -0.99
TRA2B-209ENST00000466832 CLIP1P30622 1438 aa8.85□□□□□ -0.99
TRA2B-209ENST00000466832 MAGI3Q5TCQ9 1506 aa8.84□□□□□ -0.99
TRA2B-209ENST00000466832 PREX1Q8TCU6 1659 aa8.84□□□□□ -0.99
TRA2B-209ENST00000466832 RAPGEF2Q9Y4G8 1499 aa8.84□□□□□ -1
TRA2B-209ENST00000466832 ABCA10Q8WWZ4 1543 aa8.83□□□□□ -1
TRA2B-209ENST00000466832 DSG3P32926 999 aa8.82□□□□□ -1
TRA2B-209ENST00000466832 MAP3K1Q13233 1512 aa8.81□□□□□ -1
TRA2B-209ENST00000466832 CUL7Q14999 1698 aa8.81□□□□□ -1
TRA2B-209ENST00000466832 ARAP3Q8WWN8 1544 aa8.8□□□□□ -1
TRA2B-209ENST00000466832 HSPA1LP34931 641 aa8.8□□□□□ -1
TRA2B-209ENST00000466832 UHRF1BP1LA0JNW5 1464 aa8.79□□□□□ -1
TRA2B-209ENST00000466832 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
TRA2B-209ENST00000466832 ARID4BQ4LE39 1312 aaPredicted RBP8.77□□□□□ -1.01
TRA2B-209ENST00000466832 GSE1Q14687 1217 aa8.76□□□□□ -1.01
TRA2B-209ENST00000466832 PTPRGP23470 1445 aa8.76□□□□□ -1.01
TRA2B-209ENST00000466832 RNF25Q96BH1 459 aaPredicted RBP8.75□□□□□ -1.01
TRA2B-209ENST00000466832 PHLDB1Q86UU1 1377 aa8.75□□□□□ -1.01
TRA2B-209ENST00000466832 POGZQ7Z3K3 1410 aa8.75□□□□□ -1.01
TRA2B-209ENST00000466832 EFCAB5A4FU69 1503 aa8.74□□□□□ -1.01
TRA2B-209ENST00000466832 TTC37Q6PGP7 1564 aa8.74□□□□□ -1.01
TRA2B-209ENST00000466832 CTTNBP2Q8WZ74 1663 aa8.74□□□□□ -1.01
TRA2B-209ENST00000466832 CD109Q6YHK3 1445 aa8.74□□□□□ -1.01
TRA2B-209ENST00000466832 KDM5BQ9UGL1 1544 aa8.72□□□□□ -1.01
TRA2B-209ENST00000466832 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.02
TRA2B-209ENST00000466832 RIOK3O14730 519 aaKnown RBP8.71□□□□□ -1.02
TRA2B-209ENST00000466832 NKX1-1Q15270 411 aaPredicted RBP8.71□□□□□ -1.02
TRA2B-209ENST00000466832 RGS17Q9UGC6 210 aaPredicted RBP8.71□□□□□ -1.02
TRA2B-209ENST00000466832 SETD1BQ9UPS6 1966 aaKnown RBP8.71□□□□□ -1.02
TRA2B-209ENST00000466832 IGF1RP08069 1367 aa8.7□□□□□ -1.02
TRA2B-209ENST00000466832 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
TRA2B-209ENST00000466832 TOM1O60784 492 aa8.7□□□□□ -1.02
TRA2B-209ENST00000466832 WDR7Q9Y4E6 1490 aa8.69□□□□□ -1.02
TRA2B-209ENST00000466832 GTPBP6O43824 516 aaPredicted RBP8.69□□□□□ -1.02
TRA2B-209ENST00000466832 FANCAO15360 1455 aa8.69□□□□□ -1.02
TRA2B-209ENST00000466832 RRBP1Q9P2E9 1410 aaKnown RBP8.68□□□□□ -1.02
TRA2B-209ENST00000466832 FER1L4A9Z1Z3 1794 aa8.68□□□□□ -1.02
TRA2B-209ENST00000466832 NUBP1P53384 320 aa8.68□□□□□ -1.02
TRA2B-209ENST00000466832 UACAQ9BZF9 1416 aa8.67□□□□□ -1.02
TRA2B-209ENST00000466832 ZCCHC11Q5TAX3 1644 aaKnown RBP8.67□□□□□ -1.02
TRA2B-209ENST00000466832 TIAM1Q13009 1591 aa8.67□□□□□ -1.02
TRA2B-209ENST00000466832 CLSPNQ9HAW4 1339 aa8.67□□□□□ -1.02
TRA2B-209ENST00000466832 UPF1Q92900 1129 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRA2B-209ENST00000466832 ARHGEF40Q8TER5 1519 aa8.66□□□□□ -1.02
TRA2B-209ENST00000466832 CARMIL1Q5VZK9 1371 aa8.66□□□□□ -1.02
TRA2B-209ENST00000466832 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
TRA2B-209ENST00000466832 TIMELESSQ9UNS1 1208 aa8.65□□□□□ -1.02
TRA2B-209ENST00000466832 SETD1AO15047 1707 aaKnown RBP8.65□□□□□ -1.03
TRA2B-209ENST00000466832 CARMIL2Q6F5E8 1435 aa8.65□□□□□ -1.03
TRA2B-209ENST00000466832 VGFO15240 615 aaPredicted RBP8.64□□□□□ -1.03
TRA2B-209ENST00000466832 SRCAPQ6ZRS2 3230 aa8.64□□□□□ -1.03
TRA2B-209ENST00000466832 SAMD9Q5K651 1589 aa8.64□□□□□ -1.03
TRA2B-209ENST00000466832 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
TRA2B-209ENST00000466832 PIP4K2BP78356 416 aa8.64□□□□□ -1.03
TRA2B-209ENST00000466832 KIAA0556O60303 1618 aa8.63□□□□□ -1.03
TRA2B-209ENST00000466832 DCAF8Q5TAQ9 597 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms