RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 PDCD7Q8N8D1 485 aaKnown RBP6.43□□□□□ -1.38
SORT1-202ENST00000466471 SPOCK2Q92563 424 aa6.43□□□□□ -1.38
SORT1-202ENST00000466471 TAOK2Q9UL54 1235 aa6.43□□□□□ -1.38
SORT1-202ENST00000466471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.42□□□□□ -1.38
SORT1-202ENST00000466471 ERCC6L2Q5T890 1561 aa6.42□□□□□ -1.38
SORT1-202ENST00000466471 PDS5BQ9NTI5 1447 aa6.42□□□□□ -1.38
SORT1-202ENST00000466471 LMTK3Q96Q04 1460 aa6.41□□□□□ -1.38
SORT1-202ENST00000466471 CYB5RLQ6IPT4 315 aa6.4□□□□□ -1.38
SORT1-202ENST00000466471 ATAD2BQ9ULI0 1458 aa6.4□□□□□ -1.39
SORT1-202ENST00000466471 SNPHO15079 494 aa6.39□□□□□ -1.39
SORT1-202ENST00000466471 PDAP1Q13442 181 aaKnown RBP6.39□□□□□ -1.39
SORT1-202ENST00000466471 C3orf67Q6ZVT6 689 aa6.39□□□□□ -1.39
SORT1-202ENST00000466471 MARVELD3Q96A59 401 aa6.39□□□□□ -1.39
SORT1-202ENST00000466471 L3MBTL3Q96JM7 780 aaPredicted RBP6.39□□□□□ -1.39
SORT1-202ENST00000466471 DPY19L2Q6NUT2 758 aa6.38□□□□□ -1.39
SORT1-202ENST00000466471 BBXQ8WY36 941 aaPredicted RBP6.38□□□□□ -1.39
SORT1-202ENST00000466471 CABP2Q9NPB3 220 aa6.38□□□□□ -1.39
SORT1-202ENST00000466471 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.38□□□□□ -1.39
SORT1-202ENST00000466471 ZCCHC6Q5VYS8 1495 aaKnown RBP6.37□□□□□ -1.39
SORT1-202ENST00000466471 SOCS7O14512 581 aa6.37□□□□□ -1.39
SORT1-202ENST00000466471 RSF1Q96T23 1441 aaPredicted RBP6.36□□□□□ -1.39
SORT1-202ENST00000466471 PKD2Q13563 968 aa6.36□□□□□ -1.39
SORT1-202ENST00000466471 TMEM121BQ9BXQ6 578 aaPredicted RBP6.35□□□□□ -1.39
SORT1-202ENST00000466471 FBXO41Q8TF61 875 aa6.34□□□□□ -1.39
SORT1-202ENST00000466471 HECW2Q9P2P5 1572 aa6.31□□□□□ -1.4
SORT1-202ENST00000466471 G3V3G9 751 aa6.31□□□□□ -1.4
SORT1-202ENST00000466471 EMP3P54852 163 aa6.31□□□□□ -1.4
SORT1-202ENST00000466471 CHD1O14646 1710 aa6.3□□□□□ -1.4
SORT1-202ENST00000466471 PRKCSHP14314 528 aaPredicted RBP6.3□□□□□ -1.4
SORT1-202ENST00000466471 BOLA1Q9Y3E2 137 aa6.3□□□□□ -1.4
SORT1-202ENST00000466471 KDM4FA0A1W2PPD8 638 aa6.29□□□□□ -1.4
SORT1-202ENST00000466471 EFCAB3Q8N7B9 438 aa6.29□□□□□ -1.4
SORT1-202ENST00000466471 SMARCA4P51532 1647 aa6.28□□□□□ -1.4
SORT1-202ENST00000466471 BAZ1BQ9UIG0 1483 aaKnown RBP6.28□□□□□ -1.4
SORT1-202ENST00000466471 POTEB3A0JP26 581 aa6.28□□□□□ -1.4
SORT1-202ENST00000466471 FAM205CA6NFA0 338 aa6.28□□□□□ -1.4
SORT1-202ENST00000466471 POTEBQ6S5H4 581 aa6.28□□□□□ -1.4
SORT1-202ENST00000466471 SPNS2Q8IVW8 549 aa6.28□□□□□ -1.4
SORT1-202ENST00000466471 CEP164Q9UPV0 1460 aa6.28□□□□□ -1.4
SORT1-202ENST00000466471 MMRN1Q13201 1228 aa6.27□□□□□ -1.41
SORT1-202ENST00000466471 TPRNQ4KMQ1 711 aa6.27□□□□□ -1.41
SORT1-202ENST00000466471 ILDR2Q71H61 639 aa6.27□□□□□ -1.41
SORT1-202ENST00000466471 KIF13AQ9H1H9 1805 aa6.27□□□□□ -1.41
SORT1-202ENST00000466471 PEG3Q9GZU2 1588 aa6.27□□□□□ -1.41
SORT1-202ENST00000466471 ERICH6Q7L0X2 663 aa6.26□□□□□ -1.41
SORT1-202ENST00000466471 HS3ST6Q96QI5 342 aa6.26□□□□□ -1.41
SORT1-202ENST00000466471 HOXB3P14651 431 aaPredicted RBP6.25□□□□□ -1.41
SORT1-202ENST00000466471 KDM2AQ9Y2K7 1162 aa6.25□□□□□ -1.41
SORT1-202ENST00000466471 CADPSQ9ULU8 1353 aa6.24□□□□□ -1.41
SORT1-202ENST00000466471 RIOK3O14730 519 aaKnown RBP6.24□□□□□ -1.41
SORT1-202ENST00000466471 RNF25Q96BH1 459 aaPredicted RBP6.24□□□□□ -1.41
SORT1-202ENST00000466471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.23□□□□□ -1.41
SORT1-202ENST00000466471 ECM2O94769 699 aaPredicted RBP6.23□□□□□ -1.41
SORT1-202ENST00000466471 PAXIP1Q6ZW49 1069 aaPredicted RBP6.23□□□□□ -1.41
SORT1-202ENST00000466471 SPRYD3Q8NCJ5 442 aa6.23□□□□□ -1.41
SORT1-202ENST00000466471 ZFP91Q96JP5 570 aaPredicted RBP6.23□□□□□ -1.41
SORT1-202ENST00000466471 CLASP1Q7Z460 1538 aa6.23□□□□□ -1.41
SORT1-202ENST00000466471 EIF4G3O43432 1585 aaKnown RBP6.23□□□□□ -1.41
SORT1-202ENST00000466471 ZNF710Q8N1W2 664 aa6.22□□□□□ -1.41
SORT1-202ENST00000466471 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
SORT1-202ENST00000466471 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
SORT1-202ENST00000466471 URB2Q14146 1524 aaKnown RBP6.21□□□□□ -1.42
SORT1-202ENST00000466471 ZNF608Q9ULD9 1512 aaPredicted RBP6.21□□□□□ -1.42
SORT1-202ENST00000466471 MICALL2Q8IY33 904 aa6.21□□□□□ -1.42
SORT1-202ENST00000466471 DOK7Q18PE1 504 aa6.2□□□□□ -1.42
SORT1-202ENST00000466471 TMEM92Q6UXU6 159 aa6.2□□□□□ -1.42
SORT1-202ENST00000466471 MS4A4AQ96JQ5 239 aa6.2□□□□□ -1.42
SORT1-202ENST00000466471 PHF8Q9UPP1 1060 aa6.2□□□□□ -1.42
SORT1-202ENST00000466471 VGFO15240 615 aaPredicted RBP6.19□□□□□ -1.42
SORT1-202ENST00000466471 SOX12O15370 315 aa6.19□□□□□ -1.42
SORT1-202ENST00000466471 HOXB1P14653 301 aaPredicted RBP6.19□□□□□ -1.42
SORT1-202ENST00000466471 CFAP44Q96MT7 982 aa6.19□□□□□ -1.42
SORT1-202ENST00000466471 FANCD2Q9BXW9 1451 aa6.19□□□□□ -1.42
SORT1-202ENST00000466471 ERBB3P21860 1342 aa6.19□□□□□ -1.42
SORT1-202ENST00000466471 IFT140Q96RY7 1462 aa6.18□□□□□ -1.42
SORT1-202ENST00000466471 SPATA31D1Q6ZQQ2 1576 aa6.18□□□□□ -1.42
SORT1-202ENST00000466471 SYNJ2O15056 1496 aa6.17□□□□□ -1.42
SORT1-202ENST00000466471 DISP3Q9P2K9 1392 aa6.17□□□□□ -1.42
SORT1-202ENST00000466471 ADGRL1O94910 1474 aa6.15□□□□□ -1.42
SORT1-202ENST00000466471 KDM6BO15054 1643 aa6.15□□□□□ -1.42
SORT1-202ENST00000466471 RIMBP2O15034 1052 aa6.15□□□□□ -1.42
SORT1-202ENST00000466471 NBR1Q14596 966 aa6.15□□□□□ -1.42
SORT1-202ENST00000466471 VARS2Q5ST30 1063 aaKnown RBP6.15□□□□□ -1.42
SORT1-202ENST00000466471 BCL11BQ9C0K0 894 aaPredicted RBP6.15□□□□□ -1.42
SORT1-202ENST00000466471 NLRP6P59044 892 aa6.13□□□□□ -1.43
SORT1-202ENST00000466471 STK24Q9Y6E0 443 aa6.13□□□□□ -1.43
SORT1-202ENST00000466471 GAPVD1Q14C86 1478 aa6.13□□□□□ -1.43
SORT1-202ENST00000466471 RGL2O15211 777 aa6.12□□□□□ -1.43
SORT1-202ENST00000466471 GPR153Q6NV75 609 aa6.12□□□□□ -1.43
SORT1-202ENST00000466471 FBXO22Q8NEZ5 403 aa6.12□□□□□ -1.43
SORT1-202ENST00000466471 ARXQ96QS3 562 aa6.12□□□□□ -1.43
SORT1-202ENST00000466471 SYNJ1O43426 1573 aa6.11□□□□□ -1.43
SORT1-202ENST00000466471 ARSIQ5FYB1 569 aa6.11□□□□□ -1.43
SORT1-202ENST00000466471 STK25O00506 426 aa6.1□□□□□ -1.43
SORT1-202ENST00000466471 KHSRPQ92945 711 aaKnown RBP eCLIP6.1□□□□□ -1.432e-8■■■■□ 19.9
SORT1-202ENST00000466471 MFRPQ9BY79 579 aa6.1□□□□□ -1.43
SORT1-202ENST00000466471 ZSWIM6Q9HCJ5 1215 aa6.1□□□□□ -1.43
SORT1-202ENST00000466471 TSHZ2Q9NRE2 1034 aa6.1□□□□□ -1.43
SORT1-202ENST00000466471 PRDM2Q13029 1718 aa6.09□□□□□ -1.43
SORT1-202ENST00000466471 HS6ST3Q8IZP7 471 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms