RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 ABCC5O15440 1437 aa15.76■□□□□ 0.11
PDZRN3-204ENST00000466348 CAMSAP2Q08AD1 1489 aa15.75■□□□□ 0.11
PDZRN3-204ENST00000466348 GCC2Q8IWJ2 1684 aa15.73■□□□□ 0.11
PDZRN3-204ENST00000466348 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
PDZRN3-204ENST00000466348 ADGRL2O95490 1459 aa15.71■□□□□ 0.1
PDZRN3-204ENST00000466348 SHANK2Q9UPX8 1470 aa15.71■□□□□ 0.1
PDZRN3-204ENST00000466348 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
PDZRN3-204ENST00000466348 PLEKHH2Q8IVE3 1493 aa15.7■□□□□ 0.1
PDZRN3-204ENST00000466348 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
PDZRN3-204ENST00000466348 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
PDZRN3-204ENST00000466348 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
PDZRN3-204ENST00000466348 ANKRD30AQ9BXX3 1397 aa15.68■□□□□ 0.1
PDZRN3-204ENST00000466348 RRP7BPQ9NSQ0 103 aa15.68■□□□□ 0.1
PDZRN3-204ENST00000466348 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
PDZRN3-204ENST00000466348 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
PDZRN3-204ENST00000466348 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
PDZRN3-204ENST00000466348 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
PDZRN3-204ENST00000466348 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
PDZRN3-204ENST00000466348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.67■□□□□ 0.1
PDZRN3-204ENST00000466348 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
PDZRN3-204ENST00000466348 KIAA1107Q9UPP5 1409 aa15.67■□□□□ 0.1
PDZRN3-204ENST00000466348 ARAP3Q8WWN8 1544 aa15.66■□□□□ 0.1
PDZRN3-204ENST00000466348 PLCH2O75038 1416 aa15.65■□□□□ 0.1
PDZRN3-204ENST00000466348 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
PDZRN3-204ENST00000466348 ADGBQ8N7X0 1667 aa15.64■□□□□ 0.09
PDZRN3-204ENST00000466348 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
PDZRN3-204ENST00000466348 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
PDZRN3-204ENST00000466348 EFCAB2Q5VUJ9 269 aa15.63■□□□□ 0.09
PDZRN3-204ENST00000466348 MBD5Q9P267 1494 aa15.63■□□□□ 0.09
PDZRN3-204ENST00000466348 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
PDZRN3-204ENST00000466348 MYO5CQ9NQX4 1742 aa15.62■□□□□ 0.09
PDZRN3-204ENST00000466348 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
PDZRN3-204ENST00000466348 CCDC141Q6ZP82 1450 aa15.6■□□□□ 0.09
PDZRN3-204ENST00000466348 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
PDZRN3-204ENST00000466348 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
PDZRN3-204ENST00000466348 TTC37Q6PGP7 1564 aa15.6■□□□□ 0.09
PDZRN3-204ENST00000466348 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
PDZRN3-204ENST00000466348 SAMD9LQ8IVG5 1584 aa15.59■□□□□ 0.09
PDZRN3-204ENST00000466348 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
PDZRN3-204ENST00000466348 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.08
PDZRN3-204ENST00000466348 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.08
PDZRN3-204ENST00000466348 HNRNPMP52272 730 aaKnown RBP eCLIP15.56■□□□□ 0.08
PDZRN3-204ENST00000466348 ANKRD50Q9ULJ7 1429 aa15.56■□□□□ 0.08
PDZRN3-204ENST00000466348 ASXL2Q76L83 1435 aa15.54■□□□□ 0.08
PDZRN3-204ENST00000466348 ABCA9Q8IUA7 1624 aa15.54■□□□□ 0.08
PDZRN3-204ENST00000466348 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
PDZRN3-204ENST00000466348 KDM6BO15054 1643 aa15.52■□□□□ 0.08
PDZRN3-204ENST00000466348 KIF15Q9NS87 1388 aa15.51■□□□□ 0.07
PDZRN3-204ENST00000466348 SYCP2Q9BX26 1530 aa15.51■□□□□ 0.07
PDZRN3-204ENST00000466348 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
PDZRN3-204ENST00000466348 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
PDZRN3-204ENST00000466348 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
PDZRN3-204ENST00000466348 RTEL1-TNFRSF6BF6WH68 1400 aa15.5■□□□□ 0.07
PDZRN3-204ENST00000466348 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-204ENST00000466348 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
PDZRN3-204ENST00000466348 ABCC1P33527 1531 aa15.48■□□□□ 0.07
PDZRN3-204ENST00000466348 KDM5DQ9BY66 1539 aa15.48■□□□□ 0.07
PDZRN3-204ENST00000466348 DENND4BO75064 1496 aaPredicted RBP15.47■□□□□ 0.07
PDZRN3-204ENST00000466348 ANKRD30BQ9BXX2 1392 aa15.47■□□□□ 0.07
PDZRN3-204ENST00000466348 FANCAO15360 1455 aa15.46■□□□□ 0.06
PDZRN3-204ENST00000466348 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
PDZRN3-204ENST00000466348 PZPP20742 1482 aa15.45■□□□□ 0.06
PDZRN3-204ENST00000466348 DUOX2Q9NRD8 1548 aa15.44■□□□□ 0.06
PDZRN3-204ENST00000466348 ARHGEF12Q9NZN5 1544 aa15.44■□□□□ 0.06
PDZRN3-204ENST00000466348 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
PDZRN3-204ENST00000466348 NUP155O75694 1391 aa15.42■□□□□ 0.06
PDZRN3-204ENST00000466348 SPAG9O60271 1321 aaKnown RBP15.42■□□□□ 0.06
PDZRN3-204ENST00000466348 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
PDZRN3-204ENST00000466348 RPRD2Q5VT52 1461 aaKnown RBP15.4■□□□□ 0.06
PDZRN3-204ENST00000466348 CD109Q6YHK3 1445 aa15.4■□□□□ 0.06
PDZRN3-204ENST00000466348 TRAPPC8Q9Y2L5 1435 aa15.4■□□□□ 0.06
PDZRN3-204ENST00000466348 ADGRL1O94910 1474 aa15.39■□□□□ 0.05
PDZRN3-204ENST00000466348 PKD2Q13563 968 aa15.38■□□□□ 0.05
PDZRN3-204ENST00000466348 SCAPERQ9BY12 1400 aa15.37■□□□□ 0.05
PDZRN3-204ENST00000466348 RIMBP3CA6NJZ7 1639 aa15.37■□□□□ 0.05
PDZRN3-204ENST00000466348 RIMBP3BA6NNM3 1639 aa15.37■□□□□ 0.05
PDZRN3-204ENST00000466348 RIMBP3Q9UFD9 1639 aa15.37■□□□□ 0.05
PDZRN3-204ENST00000466348 UNC13BO14795 1591 aa15.36■□□□□ 0.05
PDZRN3-204ENST00000466348 NEO1Q92859 1461 aa15.36■□□□□ 0.05
PDZRN3-204ENST00000466348 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
PDZRN3-204ENST00000466348 GLI2P10070 1586 aa15.35■□□□□ 0.05
PDZRN3-204ENST00000466348 ZNF518AQ6AHZ1 1483 aa15.34■□□□□ 0.05
PDZRN3-204ENST00000466348 MAGI2Q86UL8 1455 aa15.34■□□□□ 0.05
PDZRN3-204ENST00000466348 AFAP1Q8N556 730 aa15.34■□□□□ 0.05
PDZRN3-204ENST00000466348 ZFYVE16Q7Z3T8 1539 aa15.33■□□□□ 0.05
PDZRN3-204ENST00000466348 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.05
PDZRN3-204ENST00000466348 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
PDZRN3-204ENST00000466348 INO80Q9ULG1 1556 aaPredicted RBP15.32■□□□□ 0.04
PDZRN3-204ENST00000466348 FOXD1Q16676 465 aa15.31■□□□□ 0.04
PDZRN3-204ENST00000466348 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
PDZRN3-204ENST00000466348 IQGAP3Q86VI3 1631 aa15.31■□□□□ 0.04
PDZRN3-204ENST00000466348 DHX29Q7Z478 1369 aaKnown RBP15.3■□□□□ 0.04
PDZRN3-204ENST00000466348 ATP10AO60312 1499 aa15.29■□□□□ 0.04
PDZRN3-204ENST00000466348 MLH3Q9UHC1 1453 aa15.29■□□□□ 0.04
PDZRN3-204ENST00000466348 TEX14Q8IWB6 1497 aa15.28■□□□□ 0.04
PDZRN3-204ENST00000466348 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-204ENST00000466348 KDM5CP41229 1560 aa15.28■□□□□ 0.04
PDZRN3-204ENST00000466348 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.04
PDZRN3-204ENST00000466348 KANK1Q14678 1352 aa15.27■□□□□ 0.04
PDZRN3-204ENST00000466348 MAP3K4Q9Y6R4 1608 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms