RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 JPH4Q96JJ6 628 aa22.84■■□□□ 1.25
SLX4-202ENST00000466154 NEFLP07196 543 aa22.84■■□□□ 1.25
SLX4-202ENST00000466154 MIA2Q96PC5 1412 aa22.83■■□□□ 1.24
SLX4-202ENST00000466154 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.24
SLX4-202ENST00000466154 NUP153P49790 1475 aaKnown RBP22.82■■□□□ 1.24
SLX4-202ENST00000466154 TCOF1Q13428 1488 aaKnown RBP22.82■■□□□ 1.24
SLX4-202ENST00000466154 HNRNPUQ00839 825 aaKnown RBP eCLIP22.82■■□□□ 1.24
SLX4-202ENST00000466154 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
SLX4-202ENST00000466154 CCER2I3L3R5 266 aa22.81■■□□□ 1.24
SLX4-202ENST00000466154 DAPK1P53355 1430 aa22.81■■□□□ 1.24
SLX4-202ENST00000466154 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
SLX4-202ENST00000466154 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
SLX4-202ENST00000466154 DENND4BO75064 1496 aaPredicted RBP22.78■■□□□ 1.24
SLX4-202ENST00000466154 ABCC5O15440 1437 aa22.78■■□□□ 1.24
SLX4-202ENST00000466154 NBPF8Q3BBV2 869 aa22.76■■□□□ 1.23
SLX4-202ENST00000466154 PLEKHD1A6NEE1 506 aa22.75■■□□□ 1.23
SLX4-202ENST00000466154 C11orf95C9JLR9 678 aaPredicted RBP22.74■■□□□ 1.23
SLX4-202ENST00000466154 IRX6P78412 446 aaPredicted RBP22.73■■□□□ 1.23
SLX4-202ENST00000466154 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
SLX4-202ENST00000466154 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
SLX4-202ENST00000466154 PKD2Q13563 968 aa22.7■■□□□ 1.22
SLX4-202ENST00000466154 KDM5BQ9UGL1 1544 aa22.69■■□□□ 1.22
SLX4-202ENST00000466154 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
SLX4-202ENST00000466154 GCC2Q8IWJ2 1684 aa22.69■■□□□ 1.22
SLX4-202ENST00000466154 CCDC184Q52MB2 194 aa22.69■■□□□ 1.22
SLX4-202ENST00000466154 TROQ12816 1431 aaPredicted RBP22.68■■□□□ 1.22
SLX4-202ENST00000466154 ANKRD30BQ9BXX2 1392 aa22.67■■□□□ 1.22
SLX4-202ENST00000466154 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
SLX4-202ENST00000466154 KDM2AQ9Y2K7 1162 aa22.66■■□□□ 1.22
SLX4-202ENST00000466154 AKNAQ7Z591 1439 aa22.66■■□□□ 1.22
SLX4-202ENST00000466154 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
SLX4-202ENST00000466154 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.22
SLX4-202ENST00000466154 CEP170Q5SW79 1584 aa22.65■■□□□ 1.22
SLX4-202ENST00000466154 CAMSAP2Q08AD1 1489 aa22.64■■□□□ 1.22
SLX4-202ENST00000466154 TSHZ2Q9NRE2 1034 aa22.64■■□□□ 1.21
SLX4-202ENST00000466154 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
SLX4-202ENST00000466154 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
SLX4-202ENST00000466154 TSPY4P0CV99 314 aa22.62■■□□□ 1.21
SLX4-202ENST00000466154 TSPY10P0CW01 314 aa22.62■■□□□ 1.21
SLX4-202ENST00000466154 MRS2Q9HD23 443 aa22.62■■□□□ 1.21
SLX4-202ENST00000466154 GPATCH8Q9UKJ3 1502 aaKnown RBP22.6■■□□□ 1.21
SLX4-202ENST00000466154 KIF14Q15058 1648 aa22.59■■□□□ 1.21
SLX4-202ENST00000466154 DNMT1P26358 1616 aaKnown RBP22.59■■□□□ 1.21
SLX4-202ENST00000466154 NCOA1Q15788 1441 aa22.58■■□□□ 1.2
SLX4-202ENST00000466154 NUP155O75694 1391 aa22.57■■□□□ 1.2
SLX4-202ENST00000466154 CCDC7Q96M83 1385 aa22.57■■□□□ 1.2
SLX4-202ENST00000466154 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
SLX4-202ENST00000466154 RPRD2Q5VT52 1461 aaKnown RBP22.57■■□□□ 1.2
SLX4-202ENST00000466154 KIF7Q2M1P5 1343 aa22.56■■□□□ 1.2
SLX4-202ENST00000466154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.2
SLX4-202ENST00000466154 PRKRIP1Q9H875 184 aaPredicted RBP22.54■■□□□ 1.2
SLX4-202ENST00000466154 CNTLNQ9NXG0 1405 aa22.53■■□□□ 1.2
SLX4-202ENST00000466154 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
SLX4-202ENST00000466154 PZPP20742 1482 aa22.49■■□□□ 1.19
SLX4-202ENST00000466154 RGL3Q3MIN7 710 aa22.49■■□□□ 1.19
SLX4-202ENST00000466154 PTPRGP23470 1445 aa22.48■■□□□ 1.19
SLX4-202ENST00000466154 ATP10BO94823 1461 aa22.48■■□□□ 1.19
SLX4-202ENST00000466154 TEX14Q8IWB6 1497 aa22.48■■□□□ 1.19
SLX4-202ENST00000466154 DCAF11Q8TEB1 546 aa22.48■■□□□ 1.19
SLX4-202ENST00000466154 CARD11Q9BXL7 1154 aa22.47■■□□□ 1.19
SLX4-202ENST00000466154 NUP160Q12769 1436 aa22.47■■□□□ 1.19
SLX4-202ENST00000466154 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
SLX4-202ENST00000466154 C9orf84Q5VXU9 1444 aa22.45■■□□□ 1.18
SLX4-202ENST00000466154 USP47Q96K76 1375 aa22.44■■□□□ 1.18
SLX4-202ENST00000466154 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
SLX4-202ENST00000466154 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
SLX4-202ENST00000466154 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
SLX4-202ENST00000466154 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
SLX4-202ENST00000466154 ABCA8O94911 1581 aa22.31■■□□□ 1.16
SLX4-202ENST00000466154 ADGRL2O95490 1459 aa22.31■■□□□ 1.16
SLX4-202ENST00000466154 ABCC10Q5T3U5 1492 aa22.31■■□□□ 1.16
SLX4-202ENST00000466154 SALL2Q9Y467 1007 aaPredicted RBP22.3■■□□□ 1.16
SLX4-202ENST00000466154 ADGBQ8N7X0 1667 aa22.3■■□□□ 1.16
SLX4-202ENST00000466154 CDC42BPAQ5VT25 1732 aa22.29■■□□□ 1.16
SLX4-202ENST00000466154 TMC1Q8TDI8 760 aa22.29■■□□□ 1.16
SLX4-202ENST00000466154 MYT1LQ9UL68 1186 aa22.29■■□□□ 1.16
SLX4-202ENST00000466154 RBM19Q9Y4C8 960 aaKnown RBP22.28■■□□□ 1.16
SLX4-202ENST00000466154 ROCK2O75116 1388 aaKnown RBP22.26■■□□□ 1.15
SLX4-202ENST00000466154 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
SLX4-202ENST00000466154 ADCY10Q96PN6 1610 aa22.26■■□□□ 1.15
SLX4-202ENST00000466154 ARHGAP5Q13017 1502 aa22.23■■□□□ 1.15
SLX4-202ENST00000466154 NBPF1Q3BBV0 1214 aa22.23■■□□□ 1.15
SLX4-202ENST00000466154 CROCC2H7BZ55 1655 aa22.22■■□□□ 1.15
SLX4-202ENST00000466154 ZBED9Q6R2W3 1325 aa22.22■■□□□ 1.15
SLX4-202ENST00000466154 CCDC141Q6ZP82 1450 aa22.2■■□□□ 1.14
SLX4-202ENST00000466154 CCDC144AA2RUR9 1427 aa22.19■■□□□ 1.14
SLX4-202ENST00000466154 DHX29Q7Z478 1369 aaKnown RBP22.19■■□□□ 1.14
SLX4-202ENST00000466154 MBD5Q9P267 1494 aa22.19■■□□□ 1.14
SLX4-202ENST00000466154 BCORL1Q5H9F3 1711 aa22.18■■□□□ 1.14
SLX4-202ENST00000466154 SYCP2Q9BX26 1530 aa22.17■■□□□ 1.14
SLX4-202ENST00000466154 SHANK2Q9UPX8 1470 aa22.16■■□□□ 1.14
SLX4-202ENST00000466154 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
SLX4-202ENST00000466154 RSPH4AQ5TD94 716 aa22.15■■□□□ 1.14
SLX4-202ENST00000466154 SAMD9LQ8IVG5 1584 aa22.14■■□□□ 1.14
SLX4-202ENST00000466154 PPP4R2Q9NY27 417 aa22.14■■□□□ 1.13
SLX4-202ENST00000466154 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
SLX4-202ENST00000466154 FAM135AQ9P2D6 1515 aa22.12■■□□□ 1.13
SLX4-202ENST00000466154 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
SLX4-202ENST00000466154 CHD1O14646 1710 aa22.11■■□□□ 1.13
SLX4-202ENST00000466154 RALGAPBQ86X10 1494 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms