RNA–Protein interactions for RNA: ENST00000466058.1

KDM3A-209, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 448 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-209ENST00000466058 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
KDM3A-209ENST00000466058 CEBPAP49715 358 aaPredicted RBP10.28□□□□□ -0.76
KDM3A-209ENST00000466058 PIP4K2BP78356 416 aa10.28□□□□□ -0.76
KDM3A-209ENST00000466058 FER1L4A9Z1Z3 1794 aa10.28□□□□□ -0.76
KDM3A-209ENST00000466058 PTPRTO14522 1441 aa10.27□□□□□ -0.77
KDM3A-209ENST00000466058 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
KDM3A-209ENST00000466058 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
KDM3A-209ENST00000466058 SIGLEC1Q9BZZ2 1709 aa10.24□□□□□ -0.77
KDM3A-209ENST00000466058 FRMPD1Q5SYB0 1578 aa10.23□□□□□ -0.77
KDM3A-209ENST00000466058 BIVM-ERCC5R4GMW8 1640 aa10.23□□□□□ -0.77
KDM3A-209ENST00000466058 ZNF335Q9H4Z2 1342 aaPredicted RBP10.22□□□□□ -0.77
KDM3A-209ENST00000466058 UHRF1BP1Q6BDS2 1440 aa10.22□□□□□ -0.77
KDM3A-209ENST00000466058 POGZQ7Z3K3 1410 aa10.22□□□□□ -0.77
KDM3A-209ENST00000466058 TTC37Q6PGP7 1564 aa10.22□□□□□ -0.77
KDM3A-209ENST00000466058 ARHGEF40Q8TER5 1519 aa10.21□□□□□ -0.78
KDM3A-209ENST00000466058 RGS17Q9UGC6 210 aaPredicted RBP10.2□□□□□ -0.78
KDM3A-209ENST00000466058 DISP1Q96F81 1524 aa10.19□□□□□ -0.78
KDM3A-209ENST00000466058 FANCAO15360 1455 aa10.19□□□□□ -0.78
KDM3A-209ENST00000466058 SETD1BQ9UPS6 1966 aaKnown RBP10.19□□□□□ -0.78
KDM3A-209ENST00000466058 SETD1AO15047 1707 aaKnown RBP10.17□□□□□ -0.78
KDM3A-209ENST00000466058 ARID3CA6NKF2 412 aa10.17□□□□□ -0.78
KDM3A-209ENST00000466058 DSG3P32926 999 aa10.17□□□□□ -0.78
KDM3A-209ENST00000466058 IQGAP2Q13576 1575 aa10.17□□□□□ -0.78
KDM3A-209ENST00000466058 PHLDB1Q86UU1 1377 aa10.15□□□□□ -0.78
KDM3A-209ENST00000466058 AKNAQ7Z591 1439 aa10.14□□□□□ -0.79
KDM3A-209ENST00000466058 POTEAQ6S8J7 498 aa10.13□□□□□ -0.79
KDM3A-209ENST00000466058 IGF1RP08069 1367 aa10.13□□□□□ -0.79
KDM3A-209ENST00000466058 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
KDM3A-209ENST00000466058 TOM1O60784 492 aa10.12□□□□□ -0.79
KDM3A-209ENST00000466058 RICTORQ6R327 1708 aa10.12□□□□□ -0.79
KDM3A-209ENST00000466058 NEO1Q92859 1461 aa10.11□□□□□ -0.79
KDM3A-209ENST00000466058 NCOA1Q15788 1441 aa10.11□□□□□ -0.79
KDM3A-209ENST00000466058 KIAA0556O60303 1618 aa10.1□□□□□ -0.79
KDM3A-209ENST00000466058 ABCA9Q8IUA7 1624 aa10.1□□□□□ -0.79
KDM3A-209ENST00000466058 DENND4BO75064 1496 aaPredicted RBP10.1□□□□□ -0.79
KDM3A-209ENST00000466058 ZFYVE16Q7Z3T8 1539 aa10.09□□□□□ -0.79
KDM3A-209ENST00000466058 ARHGEF12Q9NZN5 1544 aa10.09□□□□□ -0.79
KDM3A-209ENST00000466058 ABCB7O75027 752 aa10.08□□□□□ -0.8
KDM3A-209ENST00000466058 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
KDM3A-209ENST00000466058 CARMIL1Q5VZK9 1371 aa10.06□□□□□ -0.8
KDM3A-209ENST00000466058 C3P01024 1663 aa10.06□□□□□ -0.8
KDM3A-209ENST00000466058 UPF1Q92900 1129 aaKnown RBP eCLIP10.05□□□□□ -0.8
KDM3A-209ENST00000466058 EFCAB5A4FU69 1503 aa10.05□□□□□ -0.8
KDM3A-209ENST00000466058 ABCA8O94911 1581 aa10.05□□□□□ -0.8
KDM3A-209ENST00000466058 UGGT2Q9NYU1 1516 aa10.04□□□□□ -0.8
KDM3A-209ENST00000466058 FHOD3Q2V2M9 1422 aa10.03□□□□□ -0.8
KDM3A-209ENST00000466058 HECW1Q76N89 1606 aa10.01□□□□□ -0.81
KDM3A-209ENST00000466058 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
KDM3A-209ENST00000466058 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
KDM3A-209ENST00000466058 ZMYM4Q5VZL5 1548 aa10.01□□□□□ -0.81
KDM3A-209ENST00000466058 KIF27Q86VH2 1401 aa9.99□□□□□ -0.81
KDM3A-209ENST00000466058 TRAPPC8Q9Y2L5 1435 aa9.99□□□□□ -0.81
KDM3A-209ENST00000466058 ATP10BO94823 1461 aa9.99□□□□□ -0.81
KDM3A-209ENST00000466058 ALKQ9UM73 1620 aa9.99□□□□□ -0.81
KDM3A-209ENST00000466058 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
KDM3A-209ENST00000466058 ATP10AO60312 1499 aa9.98□□□□□ -0.81
KDM3A-209ENST00000466058 POLA2Q14181 598 aa9.97□□□□□ -0.81
KDM3A-209ENST00000466058 C9orf84Q5VXU9 1444 aa9.97□□□□□ -0.81
KDM3A-209ENST00000466058 MAGI2Q86UL8 1455 aa9.97□□□□□ -0.81
KDM3A-209ENST00000466058 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
KDM3A-209ENST00000466058 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
KDM3A-209ENST00000466058 PTPRKQ15262 1439 aa9.96□□□□□ -0.82
KDM3A-209ENST00000466058 PKD2Q13563 968 aa9.95□□□□□ -0.82
KDM3A-209ENST00000466058 TRIM52Q96A61 297 aa9.94□□□□□ -0.82
KDM3A-209ENST00000466058 CFAP74Q9C0B2 1584 aa9.92□□□□□ -0.82
KDM3A-209ENST00000466058 CPS1P31327 1500 aa9.92□□□□□ -0.82
KDM3A-209ENST00000466058 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
KDM3A-209ENST00000466058 SHANK2Q9UPX8 1470 aa9.91□□□□□ -0.82
KDM3A-209ENST00000466058 P3H3Q8IVL6 736 aa9.9□□□□□ -0.82
KDM3A-209ENST00000466058 TCOF1Q13428 1488 aaKnown RBP9.9□□□□□ -0.83
KDM3A-209ENST00000466058 SCAPERQ9BY12 1400 aa9.9□□□□□ -0.83
KDM3A-209ENST00000466058 PLA2R1Q13018 1463 aa9.88□□□□□ -0.83
KDM3A-209ENST00000466058 RAPGEF2Q9Y4G8 1499 aa9.88□□□□□ -0.83
KDM3A-209ENST00000466058 IFFO2Q5TF58 517 aa9.88□□□□□ -0.83
KDM3A-209ENST00000466058 GOLGA3Q08378 1498 aa9.87□□□□□ -0.83
KDM3A-209ENST00000466058 CTTNBP2Q8WZ74 1663 aa9.85□□□□□ -0.83
KDM3A-209ENST00000466058 MYO3AQ8NEV4 1616 aa9.85□□□□□ -0.83
KDM3A-209ENST00000466058 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
KDM3A-209ENST00000466058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.84□□□□□ -0.83
KDM3A-209ENST00000466058 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
KDM3A-209ENST00000466058 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
KDM3A-209ENST00000466058 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
KDM3A-209ENST00000466058 SETBP1Q9Y6X0 1596 aa9.84□□□□□ -0.83
KDM3A-209ENST00000466058 NPATQ14207 1427 aa9.82□□□□□ -0.84
KDM3A-209ENST00000466058 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
KDM3A-209ENST00000466058 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
KDM3A-209ENST00000466058 VWDEQ8N2E2 1590 aa9.82□□□□□ -0.84
KDM3A-209ENST00000466058 STRCP1A6NGW2 1772 aa9.81□□□□□ -0.84
KDM3A-209ENST00000466058 DIP2CQ9Y2E4 1556 aa9.81□□□□□ -0.84
KDM3A-209ENST00000466058 ZMYM3Q14202 1370 aa9.81□□□□□ -0.84
KDM3A-209ENST00000466058 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
KDM3A-209ENST00000466058 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
KDM3A-209ENST00000466058 RNF17Q9BXT8 1623 aaKnown RBP9.81□□□□□ -0.84
KDM3A-209ENST00000466058 NEURL4Q96JN8 1562 aa9.8□□□□□ -0.84
KDM3A-209ENST00000466058 PLEKHD1A6NEE1 506 aa9.8□□□□□ -0.84
KDM3A-209ENST00000466058 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
KDM3A-209ENST00000466058 RAPGEF6Q8TEU7 1601 aa9.8□□□□□ -0.84
KDM3A-209ENST00000466058 CNTLNQ9NXG0 1405 aa9.8□□□□□ -0.84
KDM3A-209ENST00000466058 AGLP35573 1532 aa9.79□□□□□ -0.84
KDM3A-209ENST00000466058 ABCA6Q8N139 1617 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms