RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 CERKQ8TCT0 537 aa18.71■□□□□ 0.59
CSMD2-207ENST00000465819 PLCH2O75038 1416 aa18.71■□□□□ 0.59
CSMD2-207ENST00000465819 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.59
CSMD2-207ENST00000465819 ARHGEF12Q9NZN5 1544 aa18.69■□□□□ 0.58
CSMD2-207ENST00000465819 PREX1Q8TCU6 1659 aa18.69■□□□□ 0.58
CSMD2-207ENST00000465819 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
CSMD2-207ENST00000465819 ATP10AO60312 1499 aa18.68■□□□□ 0.58
CSMD2-207ENST00000465819 MYO5CQ9NQX4 1742 aa18.68■□□□□ 0.58
CSMD2-207ENST00000465819 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
CSMD2-207ENST00000465819 KIF14Q15058 1648 aa18.6■□□□□ 0.57
CSMD2-207ENST00000465819 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
CSMD2-207ENST00000465819 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
CSMD2-207ENST00000465819 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
CSMD2-207ENST00000465819 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
CSMD2-207ENST00000465819 ATP1B4Q9UN42 357 aaPredicted RBP18.59■□□□□ 0.57
CSMD2-207ENST00000465819 KDM5CP41229 1560 aa18.59■□□□□ 0.57
CSMD2-207ENST00000465819 ARHGAP5Q13017 1502 aa18.57■□□□□ 0.56
CSMD2-207ENST00000465819 UHRF1BP1Q6BDS2 1440 aa18.57■□□□□ 0.56
CSMD2-207ENST00000465819 SETD1BQ9UPS6 1966 aaKnown RBP18.56■□□□□ 0.56
CSMD2-207ENST00000465819 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
CSMD2-207ENST00000465819 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
CSMD2-207ENST00000465819 TROQ12816 1431 aaPredicted RBP18.55■□□□□ 0.56
CSMD2-207ENST00000465819 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
CSMD2-207ENST00000465819 DIP2CQ9Y2E4 1556 aa18.55■□□□□ 0.56
CSMD2-207ENST00000465819 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
CSMD2-207ENST00000465819 AFAP1Q8N556 730 aa18.53■□□□□ 0.56
CSMD2-207ENST00000465819 CLIP1P30622 1438 aa18.52■□□□□ 0.56
CSMD2-207ENST00000465819 MYT1LQ9UL68 1186 aa18.52■□□□□ 0.56
CSMD2-207ENST00000465819 C3P01024 1663 aa18.52■□□□□ 0.56
CSMD2-207ENST00000465819 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
CSMD2-207ENST00000465819 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
CSMD2-207ENST00000465819 ABCA6Q8N139 1617 aa18.51■□□□□ 0.55
CSMD2-207ENST00000465819 DISP3Q9P2K9 1392 aa18.51■□□□□ 0.55
CSMD2-207ENST00000465819 CDC42BPBQ9Y5S2 1711 aa18.51■□□□□ 0.55
CSMD2-207ENST00000465819 MLH3Q9UHC1 1453 aa18.49■□□□□ 0.55
CSMD2-207ENST00000465819 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
CSMD2-207ENST00000465819 PTPRTO14522 1441 aa18.48■□□□□ 0.55
CSMD2-207ENST00000465819 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
CSMD2-207ENST00000465819 PREX2Q70Z35 1606 aa18.47■□□□□ 0.55
CSMD2-207ENST00000465819 AGLP35573 1532 aa18.47■□□□□ 0.55
CSMD2-207ENST00000465819 ABCC1P33527 1531 aa18.46■□□□□ 0.55
CSMD2-207ENST00000465819 ILDR2Q71H61 639 aa18.46■□□□□ 0.55
CSMD2-207ENST00000465819 ITSN2Q9NZM3 1697 aa18.46■□□□□ 0.55
CSMD2-207ENST00000465819 TRAPPC8Q9Y2L5 1435 aa18.44■□□□□ 0.54
CSMD2-207ENST00000465819 ESF1Q9H501 851 aaKnown RBP18.44■□□□□ 0.54
CSMD2-207ENST00000465819 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
CSMD2-207ENST00000465819 KIDINS220Q9ULH0 1771 aa18.42■□□□□ 0.54
CSMD2-207ENST00000465819 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
CSMD2-207ENST00000465819 SOCS7O14512 581 aa18.41■□□□□ 0.54
CSMD2-207ENST00000465819 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
CSMD2-207ENST00000465819 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
CSMD2-207ENST00000465819 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.53
CSMD2-207ENST00000465819 IQSEC2Q5JU85 1478 aa18.39■□□□□ 0.53
CSMD2-207ENST00000465819 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
CSMD2-207ENST00000465819 MROH2AA6NES4 1674 aa18.37■□□□□ 0.53
CSMD2-207ENST00000465819 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
CSMD2-207ENST00000465819 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
CSMD2-207ENST00000465819 SAMD9LQ8IVG5 1584 aa18.34■□□□□ 0.53
CSMD2-207ENST00000465819 NPATQ14207 1427 aa18.34■□□□□ 0.53
CSMD2-207ENST00000465819 SUPT6HQ7KZ85 1726 aaKnown RBP18.31■□□□□ 0.52
CSMD2-207ENST00000465819 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
CSMD2-207ENST00000465819 SYCP2Q9BX26 1530 aa18.3■□□□□ 0.52
CSMD2-207ENST00000465819 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
CSMD2-207ENST00000465819 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
CSMD2-207ENST00000465819 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
CSMD2-207ENST00000465819 MYO3AQ8NEV4 1616 aa18.27■□□□□ 0.52
CSMD2-207ENST00000465819 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
CSMD2-207ENST00000465819 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
CSMD2-207ENST00000465819 ATP7AQ04656 1500 aa18.26■□□□□ 0.51
CSMD2-207ENST00000465819 GPATCH8Q9UKJ3 1502 aaKnown RBP18.26■□□□□ 0.51
CSMD2-207ENST00000465819 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
CSMD2-207ENST00000465819 NCKAP5LQ9HCH0 1330 aa18.25■□□□□ 0.51
CSMD2-207ENST00000465819 PLA2R1Q13018 1463 aa18.25■□□□□ 0.51
CSMD2-207ENST00000465819 INO80Q9ULG1 1556 aaPredicted RBP18.25■□□□□ 0.51
CSMD2-207ENST00000465819 ZNF335Q9H4Z2 1342 aaPredicted RBP18.24■□□□□ 0.51
CSMD2-207ENST00000465819 CEP170BQ9Y4F5 1589 aaPredicted RBP18.24■□□□□ 0.51
CSMD2-207ENST00000465819 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
CSMD2-207ENST00000465819 A2MP01023 1474 aa18.22■□□□□ 0.51
CSMD2-207ENST00000465819 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
CSMD2-207ENST00000465819 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
CSMD2-207ENST00000465819 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
CSMD2-207ENST00000465819 PKD2Q13563 968 aa18.21■□□□□ 0.51
CSMD2-207ENST00000465819 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
CSMD2-207ENST00000465819 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
CSMD2-207ENST00000465819 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
CSMD2-207ENST00000465819 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
CSMD2-207ENST00000465819 GGT6Q6P531 493 aa18.17■□□□□ 0.5
CSMD2-207ENST00000465819 CCNB3Q8WWL7 1395 aa18.16■□□□□ 0.5
CSMD2-207ENST00000465819 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
CSMD2-207ENST00000465819 DNMT1P26358 1616 aaKnown RBP18.13■□□□□ 0.49
CSMD2-207ENST00000465819 A2ML1A8K2U0 1454 aa18.13■□□□□ 0.49
CSMD2-207ENST00000465819 POLR1AO95602 1720 aaPredicted RBP18.11■□□□□ 0.49
CSMD2-207ENST00000465819 MTUS2Q5JR59 1369 aa18.1■□□□□ 0.49
CSMD2-207ENST00000465819 TIAM1Q13009 1591 aa18.09■□□□□ 0.49
CSMD2-207ENST00000465819 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
CSMD2-207ENST00000465819 NEURL4Q96JN8 1562 aa18.07■□□□□ 0.48
CSMD2-207ENST00000465819 CPS1P31327 1500 aa18.07■□□□□ 0.48
CSMD2-207ENST00000465819 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
CSMD2-207ENST00000465819 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
CSMD2-207ENST00000465819 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms