RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CERKQ8TCT0 537 aa16.78■□□□□ 0.28
APP-213ENST00000464867 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
APP-213ENST00000464867 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
APP-213ENST00000464867 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
APP-213ENST00000464867 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
APP-213ENST00000464867 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
APP-213ENST00000464867 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
APP-213ENST00000464867 DISP1Q96F81 1524 aa16.71■□□□□ 0.27
APP-213ENST00000464867 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
APP-213ENST00000464867 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
APP-213ENST00000464867 SSUH2Q9Y2M2 353 aa16.7■□□□□ 0.26
APP-213ENST00000464867 ARAP3Q8WWN8 1544 aa16.68■□□□□ 0.26
APP-213ENST00000464867 HSPA2P54652 639 aa16.66■□□□□ 0.26
APP-213ENST00000464867 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
APP-213ENST00000464867 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
APP-213ENST00000464867 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
APP-213ENST00000464867 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
APP-213ENST00000464867 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
APP-213ENST00000464867 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
APP-213ENST00000464867 PIP4P2Q8N4L2 257 aa16.6■□□□□ 0.25
APP-213ENST00000464867 RIMS1Q86UR5 1692 aaKnown RBP16.59■□□□□ 0.25
APP-213ENST00000464867 RAPGEF3O95398 923 aa16.58■□□□□ 0.24
APP-213ENST00000464867 FAM9AQ8IZU1 332 aaPredicted RBP16.57■□□□□ 0.24
APP-213ENST00000464867 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.24
APP-213ENST00000464867 POGZQ7Z3K3 1410 aa16.52■□□□□ 0.23
APP-213ENST00000464867 GOLGA3Q08378 1498 aa16.5■□□□□ 0.23
APP-213ENST00000464867 ABCA8O94911 1581 aa16.5■□□□□ 0.23
APP-213ENST00000464867 NEO1Q92859 1461 aa16.49■□□□□ 0.23
APP-213ENST00000464867 SPDYE1Q8NFV5 336 aaPredicted RBP16.49■□□□□ 0.23
APP-213ENST00000464867 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
APP-213ENST00000464867 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
APP-213ENST00000464867 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
APP-213ENST00000464867 FANCAO15360 1455 aa16.45■□□□□ 0.22
APP-213ENST00000464867 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
APP-213ENST00000464867 ARHGEF40Q8TER5 1519 aa16.44■□□□□ 0.22
APP-213ENST00000464867 YEATS2Q9ULM3 1422 aa16.44■□□□□ 0.22
APP-213ENST00000464867 FRMPD1Q5SYB0 1578 aa16.42■□□□□ 0.22
APP-213ENST00000464867 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
APP-213ENST00000464867 AKNAQ7Z591 1439 aa16.4■□□□□ 0.22
APP-213ENST00000464867 MLECQ14165 292 aa16.4■□□□□ 0.22
APP-213ENST00000464867 FER1L4A9Z1Z3 1794 aa16.4■□□□□ 0.22
APP-213ENST00000464867 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
APP-213ENST00000464867 DENND4BO75064 1496 aaPredicted RBP16.39■□□□□ 0.21
APP-213ENST00000464867 ATP10BO94823 1461 aa16.38■□□□□ 0.21
APP-213ENST00000464867 TTC37Q6PGP7 1564 aa16.36■□□□□ 0.21
APP-213ENST00000464867 STRCQ7RTU9 1775 aa16.35■□□□□ 0.21
APP-213ENST00000464867 RICTORQ6R327 1708 aa16.34■□□□□ 0.21
APP-213ENST00000464867 EFCAB5A4FU69 1503 aa16.33■□□□□ 0.2
APP-213ENST00000464867 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
APP-213ENST00000464867 ZFYVE16Q7Z3T8 1539 aa16.32■□□□□ 0.2
APP-213ENST00000464867 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
APP-213ENST00000464867 IQSEC2Q5JU85 1478 aa16.31■□□□□ 0.2
APP-213ENST00000464867 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
APP-213ENST00000464867 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
APP-213ENST00000464867 PTPRTO14522 1441 aa16.3■□□□□ 0.2
APP-213ENST00000464867 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
APP-213ENST00000464867 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
APP-213ENST00000464867 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
APP-213ENST00000464867 CEBPAP49715 358 aaPredicted RBP16.27■□□□□ 0.2
APP-213ENST00000464867 P3H3Q8IVL6 736 aa16.27■□□□□ 0.2
APP-213ENST00000464867 ZMYM4Q5VZL5 1548 aa16.27■□□□□ 0.2
APP-213ENST00000464867 SIGLEC1Q9BZZ2 1709 aa16.26■□□□□ 0.19
APP-213ENST00000464867 UBAP1LF5GYI3 381 aa16.24■□□□□ 0.19
APP-213ENST00000464867 LTBP4Q8N2S1 1624 aa16.23■□□□□ 0.19
APP-213ENST00000464867 PLEKHD1A6NEE1 506 aa16.23■□□□□ 0.19
APP-213ENST00000464867 ARHGEF12Q9NZN5 1544 aa16.23■□□□□ 0.19
APP-213ENST00000464867 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
APP-213ENST00000464867 RAPGEF6Q8TEU7 1601 aa16.22■□□□□ 0.19
APP-213ENST00000464867 HECW1Q76N89 1606 aa16.2■□□□□ 0.18
APP-213ENST00000464867 ATP10AO60312 1499 aa16.2■□□□□ 0.18
APP-213ENST00000464867 HAX1O00165 279 aa16.19■□□□□ 0.18
APP-213ENST00000464867 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
APP-213ENST00000464867 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
APP-213ENST00000464867 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
APP-213ENST00000464867 SCAPERQ9BY12 1400 aa16.14■□□□□ 0.17
APP-213ENST00000464867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
APP-213ENST00000464867 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
APP-213ENST00000464867 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
APP-213ENST00000464867 NUP153P49790 1475 aaKnown RBP16.11■□□□□ 0.17
APP-213ENST00000464867 EVX2Q03828 476 aa16.11■□□□□ 0.17
APP-213ENST00000464867 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
APP-213ENST00000464867 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
APP-213ENST00000464867 TRAPPC8Q9Y2L5 1435 aa16.1■□□□□ 0.17
APP-213ENST00000464867 C3P01024 1663 aa16.09■□□□□ 0.17
APP-213ENST00000464867 ZNF335Q9H4Z2 1342 aaPredicted RBP16.07■□□□□ 0.16
APP-213ENST00000464867 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
APP-213ENST00000464867 SAMD9Q5K651 1589 aa16.07■□□□□ 0.16
APP-213ENST00000464867 HSPA1LP34931 641 aa16.06■□□□□ 0.16
APP-213ENST00000464867 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
APP-213ENST00000464867 CAMSAP1Q5T5Y3 1602 aa16.05■□□□□ 0.16
APP-213ENST00000464867 PLCH2O75038 1416 aa16.04■□□□□ 0.16
APP-213ENST00000464867 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
APP-213ENST00000464867 TOM1O60784 492 aa16.03■□□□□ 0.16
APP-213ENST00000464867 NCKAP5LQ9HCH0 1330 aa16.02■□□□□ 0.16
APP-213ENST00000464867 ZNF518AQ6AHZ1 1483 aa16.02■□□□□ 0.15
APP-213ENST00000464867 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
APP-213ENST00000464867 PKD2Q13563 968 aa16■□□□□ 0.15
APP-213ENST00000464867 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
APP-213ENST00000464867 PROM2Q8N271 834 aa15.99■□□□□ 0.15
APP-213ENST00000464867 CNTLNQ9NXG0 1405 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms