RNA–Protein interactions for RNA: ENST00000464752.1

SRRM3-201, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-201ENST00000464752 KIAA0556O60303 1618 aa28.56■■■□□ 2.16
SRRM3-201ENST00000464752 NEFLP07196 543 aa28.56■■■□□ 2.16
SRRM3-201ENST00000464752 C11orf95C9JLR9 678 aaPredicted RBP28.54■■■□□ 2.16
SRRM3-201ENST00000464752 NBPF8Q3BBV2 869 aa28.52■■■□□ 2.16
SRRM3-201ENST00000464752 SLC4A1APQ9BWU0 796 aaKnown RBP28.52■■■□□ 2.16
SRRM3-201ENST00000464752 CDK11AQ9UQ88 783 aaPredicted RBP28.52■■■□□ 2.16
SRRM3-201ENST00000464752 HNRNPUQ00839 825 aaKnown RBP eCLIP28.51■■■□□ 2.16
SRRM3-201ENST00000464752 ANKRD30BQ9BXX2 1392 aa28.51■■■□□ 2.15
SRRM3-201ENST00000464752 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
SRRM3-201ENST00000464752 ROCK1Q13464 1354 aa28.5■■■□□ 2.15
SRRM3-201ENST00000464752 FBLN2P98095 1184 aa28.5■■■□□ 2.15
SRRM3-201ENST00000464752 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
SRRM3-201ENST00000464752 RAPGEF6Q8TEU7 1601 aa28.47■■■□□ 2.15
SRRM3-201ENST00000464752 CHMP7Q8WUX9 453 aaPredicted RBP28.47■■■□□ 2.15
SRRM3-201ENST00000464752 ZNF777Q9ULD5 760 aaPredicted RBP28.47■■■□□ 2.15
SRRM3-201ENST00000464752 CCDC184Q52MB2 194 aa28.45■■■□□ 2.15
SRRM3-201ENST00000464752 DNMT1P26358 1616 aaKnown RBP28.45■■■□□ 2.15
SRRM3-201ENST00000464752 CFDP1Q9UEE9 299 aaPredicted RBP28.45■■■□□ 2.14
SRRM3-201ENST00000464752 EIF4G3O43432 1585 aaKnown RBP28.44■■■□□ 2.14
SRRM3-201ENST00000464752 RPRD2Q5VT52 1461 aaKnown RBP28.42■■■□□ 2.14
SRRM3-201ENST00000464752 PLB1Q6P1J6 1458 aa28.42■■■□□ 2.14
SRRM3-201ENST00000464752 CCDC7Q96M83 1385 aa28.38■■■□□ 2.13
SRRM3-201ENST00000464752 CNTLNQ9NXG0 1405 aa28.38■■■□□ 2.13
SRRM3-201ENST00000464752 TROQ12816 1431 aaPredicted RBP28.37■■■□□ 2.13
SRRM3-201ENST00000464752 TEX14Q8IWB6 1497 aa28.36■■■□□ 2.13
SRRM3-201ENST00000464752 NCOA1Q15788 1441 aa28.36■■■□□ 2.13
SRRM3-201ENST00000464752 CAMSAP2Q08AD1 1489 aa28.35■■■□□ 2.13
SRRM3-201ENST00000464752 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
SRRM3-201ENST00000464752 IRX6P78412 446 aaPredicted RBP28.33■■■□□ 2.13
SRRM3-201ENST00000464752 PRKRIP1Q9H875 184 aaPredicted RBP28.33■■■□□ 2.13
SRRM3-201ENST00000464752 JPH4Q96JJ6 628 aa28.32■■■□□ 2.12
SRRM3-201ENST00000464752 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
SRRM3-201ENST00000464752 GPATCH8Q9UKJ3 1502 aaKnown RBP28.32■■■□□ 2.12
SRRM3-201ENST00000464752 PZPP20742 1482 aa28.3■■■□□ 2.12
SRRM3-201ENST00000464752 FAM9BQ8IZU0 186 aa28.3■■■□□ 2.12
SRRM3-201ENST00000464752 KIF7Q2M1P5 1343 aa28.29■■■□□ 2.12
SRRM3-201ENST00000464752 KIF14Q15058 1648 aa28.29■■■□□ 2.12
SRRM3-201ENST00000464752 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
SRRM3-201ENST00000464752 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
SRRM3-201ENST00000464752 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
SRRM3-201ENST00000464752 SYNJ2O15056 1496 aa28.26■■■□□ 2.11
SRRM3-201ENST00000464752 PKD2Q13563 968 aa28.26■■■□□ 2.11
SRRM3-201ENST00000464752 MRS2Q9HD23 443 aa28.25■■■□□ 2.11
SRRM3-201ENST00000464752 CNGB1Q14028 1251 aaPredicted RBP28.24■■■□□ 2.11
SRRM3-201ENST00000464752 CARMIL2Q6F5E8 1435 aa28.21■■■□□ 2.11
SRRM3-201ENST00000464752 POLR3GLQ9BT43 218 aa28.2■■■□□ 2.1
SRRM3-201ENST00000464752 PLEKHD1A6NEE1 506 aa28.19■■■□□ 2.1
SRRM3-201ENST00000464752 RBM19Q9Y4C8 960 aaKnown RBP28.18■■■□□ 2.1
SRRM3-201ENST00000464752 ANKRD30AQ9BXX3 1397 aa28.17■■■□□ 2.1
SRRM3-201ENST00000464752 KIAA1107Q9UPP5 1409 aa28.17■■■□□ 2.1
SRRM3-201ENST00000464752 ITSN2Q9NZM3 1697 aa28.17■■■□□ 2.1
SRRM3-201ENST00000464752 ANKRD50Q9ULJ7 1429 aa28.14■■■□□ 2.1
SRRM3-201ENST00000464752 NUP160Q12769 1436 aa28.13■■■□□ 2.09
SRRM3-201ENST00000464752 ADGRL2O95490 1459 aa28.13■■■□□ 2.09
SRRM3-201ENST00000464752 ADGBQ8N7X0 1667 aa28.13■■■□□ 2.09
SRRM3-201ENST00000464752 ADCY10Q96PN6 1610 aa28.11■■■□□ 2.09
SRRM3-201ENST00000464752 NUP155O75694 1391 aa28.1■■■□□ 2.09
SRRM3-201ENST00000464752 USP47Q96K76 1375 aa28.09■■■□□ 2.09
SRRM3-201ENST00000464752 ATP10BO94823 1461 aa28.09■■■□□ 2.09
SRRM3-201ENST00000464752 MBD5Q9P267 1494 aa28.08■■■□□ 2.08
SRRM3-201ENST00000464752 HNRNPMP52272 730 aaKnown RBP eCLIP28.07■■■□□ 2.08
SRRM3-201ENST00000464752 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
SRRM3-201ENST00000464752 TSPY4P0CV99 314 aa28.05■■■□□ 2.08
SRRM3-201ENST00000464752 TSPY10P0CW01 314 aa28.05■■■□□ 2.08
SRRM3-201ENST00000464752 C9orf84Q5VXU9 1444 aa28.04■■■□□ 2.08
SRRM3-201ENST00000464752 KDM2AQ9Y2K7 1162 aa28.04■■■□□ 2.08
SRRM3-201ENST00000464752 CDC42BPAQ5VT25 1732 aa28.03■■■□□ 2.08
SRRM3-201ENST00000464752 ABCC10Q5T3U5 1492 aa28.03■■■□□ 2.08
SRRM3-201ENST00000464752 ANP32EQ9BTT0 268 aa28.02■■■□□ 2.08
SRRM3-201ENST00000464752 ZBED9Q6R2W3 1325 aa28.02■■■□□ 2.08
SRRM3-201ENST00000464752 BCORL1Q5H9F3 1711 aa28.02■■■□□ 2.08
SRRM3-201ENST00000464752 ABCA8O94911 1581 aa28.01■■■□□ 2.08
SRRM3-201ENST00000464752 DHX29Q7Z478 1369 aaKnown RBP28.01■■■□□ 2.07
SRRM3-201ENST00000464752 POLR1AO95602 1720 aaPredicted RBP28■■■□□ 2.07
SRRM3-201ENST00000464752 SENP3-EIF4A1A0A087X0R7 540 aa27.98■■■□□ 2.07
SRRM3-201ENST00000464752 CARD11Q9BXL7 1154 aa27.97■■■□□ 2.07
SRRM3-201ENST00000464752 KIF15Q9NS87 1388 aa27.95■■■□□ 2.06
SRRM3-201ENST00000464752 DCAF11Q8TEB1 546 aa27.93■■■□□ 2.06
SRRM3-201ENST00000464752 PPP4R2Q9NY27 417 aa27.92■■■□□ 2.06
SRRM3-201ENST00000464752 KDM5CP41229 1560 aa27.91■■■□□ 2.06
SRRM3-201ENST00000464752 SHANK2Q9UPX8 1470 aa27.91■■■□□ 2.06
SRRM3-201ENST00000464752 PTPRGP23470 1445 aa27.91■■■□□ 2.06
SRRM3-201ENST00000464752 ST20-MTHFSA0A0A6YYL1 179 aa27.9■■■□□ 2.06
SRRM3-201ENST00000464752 UHRF1BP1Q6BDS2 1440 aa27.88■■■□□ 2.05
SRRM3-201ENST00000464752 B4GALNT3Q6L9W6 998 aa27.88■■■□□ 2.05
SRRM3-201ENST00000464752 ERICH6BQ5W0A0 696 aa27.87■■■□□ 2.05
SRRM3-201ENST00000464752 RALGAPBQ86X10 1494 aa27.86■■■□□ 2.05
SRRM3-201ENST00000464752 ARID4BQ4LE39 1312 aaPredicted RBP27.83■■■□□ 2.05
SRRM3-201ENST00000464752 RGL3Q3MIN7 710 aa27.79■■■□□ 2.04
SRRM3-201ENST00000464752 TMC1Q8TDI8 760 aa27.79■■■□□ 2.04
SRRM3-201ENST00000464752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.79■■■□□ 2.04
SRRM3-201ENST00000464752 KDM5DQ9BY66 1539 aa27.79■■■□□ 2.04
SRRM3-201ENST00000464752 MSH5O43196 834 aa27.78■■■□□ 2.04
SRRM3-201ENST00000464752 PNISRQ8TF01 805 aaKnown RBP27.78■■■□□ 2.04
SRRM3-201ENST00000464752 ARHGEF12Q9NZN5 1544 aa27.78■■■□□ 2.04
SRRM3-201ENST00000464752 SAMD9LQ8IVG5 1584 aa27.77■■■□□ 2.04
SRRM3-201ENST00000464752 CCDC141Q6ZP82 1450 aa27.76■■■□□ 2.03
SRRM3-201ENST00000464752 ARHGEF5Q12774 1597 aa27.76■■■□□ 2.03
SRRM3-201ENST00000464752 ROCK2O75116 1388 aaKnown RBP27.76■■■□□ 2.03
SRRM3-201ENST00000464752 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms