RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.11
ATF3-207ENST00000464547 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
ATF3-207ENST00000464547 SIN3AQ96ST3 1273 aa14.33□□□□□ -0.12
ATF3-207ENST00000464547 CFDP1Q9UEE9 299 aaPredicted RBP14.32□□□□□ -0.12
ATF3-207ENST00000464547 ROCK1Q13464 1354 aa14.32□□□□□ -0.12
ATF3-207ENST00000464547 CAMSAP2Q08AD1 1489 aa14.31□□□□□ -0.12
ATF3-207ENST00000464547 KDM6BO15054 1643 aa14.3□□□□□ -0.12
ATF3-207ENST00000464547 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
ATF3-207ENST00000464547 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
ATF3-207ENST00000464547 CDC42BPAQ5VT25 1732 aa14.27□□□□□ -0.12
ATF3-207ENST00000464547 ABCC2Q92887 1545 aa14.27□□□□□ -0.12
ATF3-207ENST00000464547 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
ATF3-207ENST00000464547 TRIM52Q96A61 297 aa14.24□□□□□ -0.13
ATF3-207ENST00000464547 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
ATF3-207ENST00000464547 UHRF1BP1LA0JNW5 1464 aa14.23□□□□□ -0.13
ATF3-207ENST00000464547 DENND4BO75064 1496 aaPredicted RBP14.23□□□□□ -0.13
ATF3-207ENST00000464547 ADGRL2O95490 1459 aa14.22□□□□□ -0.13
ATF3-207ENST00000464547 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
ATF3-207ENST00000464547 ADGBQ8N7X0 1667 aa14.22□□□□□ -0.13
ATF3-207ENST00000464547 PPP1R15AO75807 674 aaPredicted RBP14.2□□□□□ -0.14
ATF3-207ENST00000464547 MPHOSPH9Q99550 1183 aa14.2□□□□□ -0.14
ATF3-207ENST00000464547 NCOA1Q15788 1441 aa14.2□□□□□ -0.14
ATF3-207ENST00000464547 PREX2Q70Z35 1606 aa14.19□□□□□ -0.14
ATF3-207ENST00000464547 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
ATF3-207ENST00000464547 ANKRD30AQ9BXX3 1397 aa14.18□□□□□ -0.14
ATF3-207ENST00000464547 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
ATF3-207ENST00000464547 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
ATF3-207ENST00000464547 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
ATF3-207ENST00000464547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
ATF3-207ENST00000464547 ZCCHC11Q5TAX3 1644 aaKnown RBP14.16□□□□□ -0.14
ATF3-207ENST00000464547 CDC42BPBQ9Y5S2 1711 aa14.16□□□□□ -0.14
ATF3-207ENST00000464547 TTC37Q6PGP7 1564 aa14.16□□□□□ -0.14
ATF3-207ENST00000464547 SAMD9LQ8IVG5 1584 aa14.16□□□□□ -0.14
ATF3-207ENST00000464547 MBD5Q9P267 1494 aa14.15□□□□□ -0.14
ATF3-207ENST00000464547 HNRNPMP52272 730 aaKnown RBP eCLIP14.15□□□□□ -0.14
ATF3-207ENST00000464547 C9orf84Q5VXU9 1444 aa14.15□□□□□ -0.14
ATF3-207ENST00000464547 MIER1Q8N108 512 aa14.13□□□□□ -0.15
ATF3-207ENST00000464547 PZPP20742 1482 aa14.12□□□□□ -0.15
ATF3-207ENST00000464547 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
ATF3-207ENST00000464547 ARHGAP5Q13017 1502 aa14.11□□□□□ -0.15
ATF3-207ENST00000464547 TSPY4P0CV99 314 aa14.11□□□□□ -0.15
ATF3-207ENST00000464547 TSPY10P0CW01 314 aa14.11□□□□□ -0.15
ATF3-207ENST00000464547 FOXD1Q16676 465 aa14.11□□□□□ -0.15
ATF3-207ENST00000464547 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
ATF3-207ENST00000464547 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
ATF3-207ENST00000464547 CCDC141Q6ZP82 1450 aa14.11□□□□□ -0.15
ATF3-207ENST00000464547 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
ATF3-207ENST00000464547 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
ATF3-207ENST00000464547 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
ATF3-207ENST00000464547 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
ATF3-207ENST00000464547 PLCH2O75038 1416 aa14.08□□□□□ -0.15
ATF3-207ENST00000464547 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.16
ATF3-207ENST00000464547 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
ATF3-207ENST00000464547 SYCP2Q9BX26 1530 aa14.07□□□□□ -0.16
ATF3-207ENST00000464547 MAST1Q9Y2H9 1570 aa14.07□□□□□ -0.16
ATF3-207ENST00000464547 KIF15Q9NS87 1388 aa14.07□□□□□ -0.16
ATF3-207ENST00000464547 RPRD2Q5VT52 1461 aaKnown RBP14.05□□□□□ -0.16
ATF3-207ENST00000464547 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
ATF3-207ENST00000464547 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
ATF3-207ENST00000464547 ARHGEF12Q9NZN5 1544 aa14.04□□□□□ -0.16
ATF3-207ENST00000464547 L3MBTL2Q969R5 705 aa14.03□□□□□ -0.16
ATF3-207ENST00000464547 WDR7Q9Y4E6 1490 aa14.03□□□□□ -0.16
ATF3-207ENST00000464547 NUP155O75694 1391 aa14.02□□□□□ -0.17
ATF3-207ENST00000464547 PKD2Q13563 968 aa14.02□□□□□ -0.17
ATF3-207ENST00000464547 ARAP3Q8WWN8 1544 aa14.01□□□□□ -0.17
ATF3-207ENST00000464547 ABCC1P33527 1531 aa14□□□□□ -0.17
ATF3-207ENST00000464547 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
ATF3-207ENST00000464547 HIRIP3Q9BW71 556 aaPredicted RBP13.99□□□□□ -0.17
ATF3-207ENST00000464547 PLXNC1O60486 1568 aa13.99□□□□□ -0.17
ATF3-207ENST00000464547 ASXL2Q76L83 1435 aa13.98□□□□□ -0.17
ATF3-207ENST00000464547 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
ATF3-207ENST00000464547 ABCA9Q8IUA7 1624 aa13.96□□□□□ -0.17
ATF3-207ENST00000464547 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
ATF3-207ENST00000464547 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
ATF3-207ENST00000464547 NBPF8Q3BBV2 869 aa13.95□□□□□ -0.18
ATF3-207ENST00000464547 UNC13BO14795 1591 aa13.95□□□□□ -0.18
ATF3-207ENST00000464547 DUOX2Q9NRD8 1548 aa13.95□□□□□ -0.18
ATF3-207ENST00000464547 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATF3-207ENST00000464547 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
ATF3-207ENST00000464547 HSPA5P11021 654 aaKnown RBP13.92□□□□□ -0.18
ATF3-207ENST00000464547 RTEL1-TNFRSF6BF6WH68 1400 aa13.91□□□□□ -0.18
ATF3-207ENST00000464547 ERBINQ96RT1 1412 aa13.91□□□□□ -0.18
ATF3-207ENST00000464547 YTHDC1Q96MU7 727 aaKnown RBP13.91□□□□□ -0.18
ATF3-207ENST00000464547 FANCAO15360 1455 aa13.91□□□□□ -0.18
ATF3-207ENST00000464547 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
ATF3-207ENST00000464547 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
ATF3-207ENST00000464547 AFAP1Q8N556 730 aa13.89□□□□□ -0.19
ATF3-207ENST00000464547 IQGAP3Q86VI3 1631 aa13.89□□□□□ -0.19
ATF3-207ENST00000464547 MAGI2Q86UL8 1455 aa13.88□□□□□ -0.19
ATF3-207ENST00000464547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
ATF3-207ENST00000464547 ZFYVE16Q7Z3T8 1539 aa13.88□□□□□ -0.19
ATF3-207ENST00000464547 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
ATF3-207ENST00000464547 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
ATF3-207ENST00000464547 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
ATF3-207ENST00000464547 INO80Q9ULG1 1556 aaPredicted RBP13.85□□□□□ -0.19
ATF3-207ENST00000464547 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
ATF3-207ENST00000464547 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
ATF3-207ENST00000464547 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
ATF3-207ENST00000464547 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
ATF3-207ENST00000464547 SPATA31E1Q6ZUB1 1445 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms